RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 EVCP57679 992 aa25.18■■□□□ 1.62
CTDSPL-206ENST00000443503 NECTIN1Q15223 517 aa25.18■■□□□ 1.62
CTDSPL-206ENST00000443503 USPL1Q5W0Q7 1092 aa25.18■■□□□ 1.62
CTDSPL-206ENST00000443503 SETD1BQ9UPS6 1966 aaKnown RBP25.18■■□□□ 1.62
CTDSPL-206ENST00000443503 CMA1P23946 247 aa25.18■■□□□ 1.62
CTDSPL-206ENST00000443503 PPP1R2P41236 205 aa25.18■■□□□ 1.62
CTDSPL-206ENST00000443503 CNNM4Q6P4Q7 775 aa25.18■■□□□ 1.62
CTDSPL-206ENST00000443503 MRVI1Q9Y6F6 885 aa25.18■■□□□ 1.62
CTDSPL-206ENST00000443503 M0R2C6 588 aa25.18■■□□□ 1.62
CTDSPL-206ENST00000443503 APOA5Q6Q788 366 aa25.18■■□□□ 1.62
CTDSPL-206ENST00000443503 TBC1D22AQ8WUA7 517 aa25.18■■□□□ 1.62
CTDSPL-206ENST00000443503 CLIC6Q96NY7 704 aa25.18■■□□□ 1.62
CTDSPL-206ENST00000443503 ERCC3P19447 782 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 LRMPQ12912 555 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 MTX1Q13505 466 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 CLIC4Q9Y696 253 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 CROCC2H7BZ55 1655 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 SP4Q02446 784 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 ERO1AQ96HE7 468 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 GOLGA6L10A0A0M3HER8 536 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 NDUFA8P51970 172 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 ZNF827Q17R98 1081 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 REXO1Q8N1G1 1221 aaKnown RBP25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 ADCY7P51828 1080 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 ZYXQ15942 572 aaKnown RBP25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 DYMQ7RTS9 669 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 PNMA1Q8ND90 353 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 PIGBQ92521 554 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 NAP1L4Q99733 375 aaKnown RBP25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 SELENOOQ9BVL4 669 aa25.17■■□□□ 1.62
CTDSPL-206ENST00000443503 ARHGAP6O43182 974 aa25.16■■□□□ 1.62
CTDSPL-206ENST00000443503 RAPGEF1Q13905 1077 aa25.16■■□□□ 1.62
CTDSPL-206ENST00000443503 ABCA6Q8N139 1617 aa25.16■■□□□ 1.62
CTDSPL-206ENST00000443503 PHACTR2O75167 634 aa25.16■■□□□ 1.62
CTDSPL-206ENST00000443503 RPL13P26373 211 aaKnown RBP25.16■■□□□ 1.62
CTDSPL-206ENST00000443503 HOOK3Q86VS8 718 aa25.16■■□□□ 1.62
CTDSPL-206ENST00000443503 FAM107BQ9H098 131 aa25.16■■□□□ 1.62
CTDSPL-206ENST00000443503 CHMP2AO43633 222 aa25.16■■□□□ 1.62
CTDSPL-206ENST00000443503 LZTS2Q9BRK4 669 aa25.16■■□□□ 1.62
CTDSPL-206ENST00000443503 PUS7LQ9H0K6 701 aaKnown RBP25.16■■□□□ 1.62
CTDSPL-206ENST00000443503 MAP2K1Q02750 393 aaPredicted RBP25.15■■□□□ 1.62
CTDSPL-206ENST00000443503 UBE4AQ14139 1066 aa25.15■■□□□ 1.62
CTDSPL-206ENST00000443503 HSF2BPO75031 334 aa25.15■■□□□ 1.62
CTDSPL-206ENST00000443503 KCNQ4P56696 695 aa25.15■■□□□ 1.62
CTDSPL-206ENST00000443503 ATG3Q9NT62 314 aa25.15■■□□□ 1.62
CTDSPL-206ENST00000443503 FTOQ9C0B1 505 aaKnown RBP eCLIP25.15■■□□□ 1.62
CTDSPL-206ENST00000443503 ADGRB3O60242 1522 aa25.15■■□□□ 1.62
CTDSPL-206ENST00000443503 NEBLO76041 1014 aa25.14■■□□□ 1.62
CTDSPL-206ENST00000443503 MED23Q9ULK4 1368 aa25.14■■□□□ 1.62
CTDSPL-206ENST00000443503 E9PCH4 1651 aa25.14■■□□□ 1.61
CTDSPL-206ENST00000443503 GCOM1H8Y6P7 765 aaPredicted RBP25.14■■□□□ 1.61
CTDSPL-206ENST00000443503 MYZAPP0CAP1 466 aa25.14■■□□□ 1.61
CTDSPL-206ENST00000443503 HERC4Q5GLZ8 1057 aaPredicted RBP25.14■■□□□ 1.61
CTDSPL-206ENST00000443503 CARD6Q9BX69 1037 aa25.14■■□□□ 1.61
CTDSPL-206ENST00000443503 PLVAPQ9BX97 442 aa25.14■■□□□ 1.61
CTDSPL-206ENST00000443503 MYCNP04198 464 aaPredicted RBP25.14■■□□□ 1.61
CTDSPL-206ENST00000443503 IGSF3O75054 1194 aa25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 ADD2P35612 726 aa25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 CABP7Q86V35 215 aa25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 TTF2Q9UNY4 1162 aaKnown RBP25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 SMCO2A6NFE2 343 aa25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 H7C1W4 665 aa25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 PPP2R3AQ06190 1150 aa25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 TRIM14Q14142 442 aa25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 MYRIPQ8NFW9 859 aa25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 RAD51AP2Q09MP3 1159 aa25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 GPIHBP1Q8IV16 184 aa25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 LRRC7Q96NW7 1537 aa25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 ZRSR2Q15696 482 aaKnown RBP25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 HAUS3Q68CZ6 603 aa25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 RGS22Q8NE09 1264 aa25.13■■□□□ 1.61
CTDSPL-206ENST00000443503 U2AF2P26368 475 aaKnown RBP eCLIP25.12■■□□□ 1.612e-7■□□□□ 9.7
CTDSPL-206ENST00000443503 CALCRLQ16602 461 aa25.12■■□□□ 1.61
CTDSPL-206ENST00000443503 RNF187Q5TA31 235 aaPredicted RBP25.12■■□□□ 1.61
CTDSPL-206ENST00000443503 BLIDQ8IZY5 108 aa25.12■■□□□ 1.61
CTDSPL-206ENST00000443503 NELFBQ8WX92 580 aa25.12■■□□□ 1.61
CTDSPL-206ENST00000443503 SPECC1LQ69YQ0 1117 aa25.12■■□□□ 1.61
CTDSPL-206ENST00000443503 RTEL1Q9NZ71 1219 aa25.12■■□□□ 1.61
CTDSPL-206ENST00000443503 CARMIL3Q8ND23 1372 aa25.12■■□□□ 1.61
CTDSPL-206ENST00000443503 WDHD1O75717 1129 aaPredicted RBP25.11■■□□□ 1.61
CTDSPL-206ENST00000443503 CCDC94Q9BW85 323 aaPredicted RBP25.11■■□□□ 1.61
CTDSPL-206ENST00000443503 CYP26C1Q6V0L0 522 aa25.11■■□□□ 1.61
CTDSPL-206ENST00000443503 GLT8D2Q9H1C3 349 aa25.11■■□□□ 1.61
CTDSPL-206ENST00000443503 SH2D4AQ9H788 454 aa25.11■■□□□ 1.61
CTDSPL-206ENST00000443503 GOLGA8HP0CJ92 632 aa25.11■■□□□ 1.61
CTDSPL-206ENST00000443503 LMBR1Q8WVP7 490 aa25.11■■□□□ 1.61
CTDSPL-206ENST00000443503 CETN3O15182 167 aa25.11■■□□□ 1.61
CTDSPL-206ENST00000443503 PRKAB2O43741 272 aa25.11■■□□□ 1.61
CTDSPL-206ENST00000443503 SCG2P13521 617 aa25.11■■□□□ 1.61
CTDSPL-206ENST00000443503 LONRF3Q496Y0 759 aa25.11■■□□□ 1.61
CTDSPL-206ENST00000443503 ARHGEF10LQ9HCE6 1279 aa25.11■■□□□ 1.61
CTDSPL-206ENST00000443503 USP40Q9NVE5 1235 aa25.11■■□□□ 1.61
CTDSPL-206ENST00000443503 BACH1O14867 736 aa25.1■■□□□ 1.61
CTDSPL-206ENST00000443503 INF2Q27J81 1249 aa25.1■■□□□ 1.61
CTDSPL-206ENST00000443503 KRBA2Q6ZNG9 492 aa25.1■■□□□ 1.61
CTDSPL-206ENST00000443503 BIN2Q9UBW5 565 aaPredicted RBP25.1■■□□□ 1.61
CTDSPL-206ENST00000443503 H0YIN7 160 aa25.1■■□□□ 1.61
CTDSPL-206ENST00000443503 USH1GQ495M9 461 aa25.1■■□□□ 1.61
CTDSPL-206ENST00000443503 GPKOWQ92917 476 aaPredicted RBP eCLIP25.1■■□□□ 1.61
CTDSPL-206ENST00000443503 ZNF804BA4D1E1 1349 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms