RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 ANKRD1Q15327 319 aa24.84■■□□□ 1.57
VPS13B-204ENST00000441350 DCPSQ96C86 337 aaKnown RBP24.84■■□□□ 1.57
VPS13B-204ENST00000441350 TSPY2A6NKD2 308 aa24.83■■□□□ 1.57
VPS13B-204ENST00000441350 VEGFAP15692 232 aaPredicted RBP24.83■■□□□ 1.57
VPS13B-204ENST00000441350 TRIM34Q9BYJ4 488 aa24.83■■□□□ 1.57
VPS13B-204ENST00000441350 GPHNQ9NQX3 736 aaPredicted RBP24.83■■□□□ 1.57
VPS13B-204ENST00000441350 SH2B2O14492 632 aaPredicted RBP24.83■■□□□ 1.56
VPS13B-204ENST00000441350 HSCBQ8IWL3 235 aa24.83■■□□□ 1.56
VPS13B-204ENST00000441350 RRAGCQ9HB90 399 aa24.83■■□□□ 1.56
VPS13B-204ENST00000441350 BECN1Q14457 450 aa24.82■■□□□ 1.56
VPS13B-204ENST00000441350 IQCA1Q86XH1 822 aa24.82■■□□□ 1.56
VPS13B-204ENST00000441350 NEDD1Q8NHV4 660 aa24.82■■□□□ 1.56
VPS13B-204ENST00000441350 BRF1Q92994 677 aa24.82■■□□□ 1.56
VPS13B-204ENST00000441350 CCDC17Q96LX7 622 aa24.82■■□□□ 1.56
VPS13B-204ENST00000441350 ZSCAN10Q96SZ4 725 aaPredicted RBP24.82■■□□□ 1.56
VPS13B-204ENST00000441350 ZKSCAN3Q9BRR0 538 aa24.82■■□□□ 1.56
VPS13B-204ENST00000441350 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.82■■□□□ 1.56
VPS13B-204ENST00000441350 TCP11L1Q9NUJ3 509 aa24.82■■□□□ 1.56
VPS13B-204ENST00000441350 ANGEL1Q9UNK9 670 aaKnown RBP24.82■■□□□ 1.56
VPS13B-204ENST00000441350 LIMCH1Q9UPQ0 1083 aa24.82■■□□□ 1.56
VPS13B-204ENST00000441350 IFIT3O14879 490 aaKnown RBP24.81■■□□□ 1.56
VPS13B-204ENST00000441350 TSPY3P0CV98 308 aa24.81■■□□□ 1.56
VPS13B-204ENST00000441350 TSPY8P0CW00 308 aa24.81■■□□□ 1.56
VPS13B-204ENST00000441350 FGD1P98174 961 aa24.81■■□□□ 1.56
VPS13B-204ENST00000441350 SART3Q15020 963 aaKnown RBP24.81■■□□□ 1.56
VPS13B-204ENST00000441350 SEC23AQ15436 765 aa24.81■■□□□ 1.56
VPS13B-204ENST00000441350 EAPPQ56P03 285 aaPredicted RBP24.81■■□□□ 1.56
VPS13B-204ENST00000441350 TMEM67Q5HYA8 995 aa24.81■■□□□ 1.56
VPS13B-204ENST00000441350 NBPF12Q5TAG4 269 aaPredicted RBP24.81■■□□□ 1.56
VPS13B-204ENST00000441350 SULF1Q8IWU6 871 aa24.81■■□□□ 1.56
VPS13B-204ENST00000441350 PLIN4Q96Q06 1357 aa24.81■■□□□ 1.56
VPS13B-204ENST00000441350 UBAC1Q9BSL1 405 aa24.81■■□□□ 1.56
VPS13B-204ENST00000441350 IL17RBQ9NRM6 502 aa24.81■■□□□ 1.56
VPS13B-204ENST00000441350 K7ELQ4 463 aaPredicted RBP24.8■■□□□ 1.56
VPS13B-204ENST00000441350 LIFRP42702 1097 aa24.8■■□□□ 1.56
VPS13B-204ENST00000441350 EVCP57679 992 aa24.8■■□□□ 1.56
VPS13B-204ENST00000441350 LARP6Q9BRS8 491 aaKnown RBP24.8■■□□□ 1.56
VPS13B-204ENST00000441350 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.8■■□□□ 1.56
VPS13B-204ENST00000441350 LY9Q9HBG7 655 aa24.8■■□□□ 1.56
VPS13B-204ENST00000441350 TNKSO95271 1327 aa24.79■■□□□ 1.56
VPS13B-204ENST00000441350 GREB1LQ9C091 1923 aaPredicted RBP24.79■■□□□ 1.56
VPS13B-204ENST00000441350 AKR1B1P15121 316 aa24.79■■□□□ 1.56
VPS13B-204ENST00000441350 CERKLQ49MI3 558 aaPredicted RBP24.79■■□□□ 1.56
VPS13B-204ENST00000441350 NOL8Q76FK4 1167 aaKnown RBP24.79■■□□□ 1.56
VPS13B-204ENST00000441350 MIGA2Q7L4E1 593 aa24.79■■□□□ 1.56
VPS13B-204ENST00000441350 KRT26Q7Z3Y9 468 aa24.79■■□□□ 1.56
VPS13B-204ENST00000441350 ENAHQ8N8S7 591 aaPredicted RBP24.79■■□□□ 1.56
VPS13B-204ENST00000441350 TPCN1Q9ULQ1 816 aa24.79■■□□□ 1.56
VPS13B-204ENST00000441350 NMT2O60551 498 aa24.79■■□□□ 1.56
VPS13B-204ENST00000441350 RRP1BQ14684 758 aaKnown RBP24.79■■□□□ 1.56
VPS13B-204ENST00000441350 PRAMEF18Q5VWM3 479 aa24.79■■□□□ 1.56
VPS13B-204ENST00000441350 SGMS1Q86VZ5 419 aa24.79■■□□□ 1.56
VPS13B-204ENST00000441350 HOOK2Q96ED9 719 aa24.79■■□□□ 1.56
VPS13B-204ENST00000441350 SENP2Q9HC62 589 aa24.79■■□□□ 1.56
VPS13B-204ENST00000441350 IGKV6D-41A0A0C4DH26 115 aa24.78■■□□□ 1.56
VPS13B-204ENST00000441350 ERICH2A1L162 156 aa24.78■■□□□ 1.56
VPS13B-204ENST00000441350 ADM5C9JUS6 153 aa24.78■■□□□ 1.56
VPS13B-204ENST00000441350 CCDC178Q5BJE1 867 aa24.78■■□□□ 1.56
VPS13B-204ENST00000441350 ANKS1AQ92625 1134 aa24.78■■□□□ 1.56
VPS13B-204ENST00000441350 TMX3Q96JJ7 454 aa24.78■■□□□ 1.56
VPS13B-204ENST00000441350 NMRK2Q9NPI5 230 aa24.78■■□□□ 1.56
VPS13B-204ENST00000441350 APOBRQ0VD83 1088 aa24.77■■□□□ 1.56
VPS13B-204ENST00000441350 WTAPQ15007 396 aa24.77■■□□□ 1.56
VPS13B-204ENST00000441350 RCSD1Q6JBY9 416 aa24.77■■□□□ 1.56
VPS13B-204ENST00000441350 TMTC2Q8N394 836 aa24.77■■□□□ 1.56
VPS13B-204ENST00000441350 ZSCAN31Q96LW9 406 aaPredicted RBP24.77■■□□□ 1.56
VPS13B-204ENST00000441350 IPO9Q96P70 1041 aaKnown RBP24.77■■□□□ 1.56
VPS13B-204ENST00000441350 POTEIP0CG38 1075 aa24.76■■□□□ 1.55
VPS13B-204ENST00000441350 POTEJP0CG39 1038 aa24.76■■□□□ 1.55
VPS13B-204ENST00000441350 NOVP48745 357 aa24.76■■□□□ 1.55
VPS13B-204ENST00000441350 SUPT20HL1Q3ZLR7 823 aa24.76■■□□□ 1.55
VPS13B-204ENST00000441350 BRPF3Q9ULD4 1205 aa24.76■■□□□ 1.55
VPS13B-204ENST00000441350 SSC5DA1L4H1 1573 aa24.76■■□□□ 1.55
VPS13B-204ENST00000441350 PHF20L1A8MW92 1017 aa24.75■■□□□ 1.55
VPS13B-204ENST00000441350 ME3Q16798 604 aa24.75■■□□□ 1.55
VPS13B-204ENST00000441350 DCAF15Q66K64 600 aa24.75■■□□□ 1.55
VPS13B-204ENST00000441350 USP48Q86UV5 1035 aa24.75■■□□□ 1.55
VPS13B-204ENST00000441350 DGKHQ86XP1 1220 aa24.75■■□□□ 1.55
VPS13B-204ENST00000441350 LARGE1O95461 756 aa24.75■■□□□ 1.55
VPS13B-204ENST00000441350 JAG1P78504 1218 aa24.75■■□□□ 1.55
VPS13B-204ENST00000441350 ABCB5Q2M3G0 1257 aa24.75■■□□□ 1.55
VPS13B-204ENST00000441350 DLK2Q6UY11 383 aa24.75■■□□□ 1.55
VPS13B-204ENST00000441350 ZNF526Q8TF50 670 aaPredicted RBP24.75■■□□□ 1.55
VPS13B-204ENST00000441350 ZNF274Q96GC6 653 aaPredicted RBP24.75■■□□□ 1.55
VPS13B-204ENST00000441350 CEP95Q96GE4 821 aa24.75■■□□□ 1.55
VPS13B-204ENST00000441350 SH2B1Q9NRF2 756 aaPredicted RBP24.75■■□□□ 1.55
VPS13B-204ENST00000441350 SHROOM1Q2M3G4 852 aaPredicted RBP24.74■■□□□ 1.55
VPS13B-204ENST00000441350 CDC37L1Q7L3B6 337 aa24.74■■□□□ 1.55
VPS13B-204ENST00000441350 MTMR4Q9NYA4 1195 aa24.74■■□□□ 1.55
VPS13B-204ENST00000441350 CLEC11AQ9Y240 323 aa24.74■■□□□ 1.55
VPS13B-204ENST00000441350 KLF18A0A0U1RQI7 1052 aa24.73■■□□□ 1.55
VPS13B-204ENST00000441350 MPHOSPH10O00566 681 aaKnown RBP24.73■■□□□ 1.55
VPS13B-204ENST00000441350 GDF11O95390 407 aa24.73■■□□□ 1.55
VPS13B-204ENST00000441350 PDIA3P30101 505 aaKnown RBP24.73■■□□□ 1.55
VPS13B-204ENST00000441350 IFIT1BQ5T764 474 aaKnown RBP24.73■■□□□ 1.55
VPS13B-204ENST00000441350 TMEM179Q6ZVK1 233 aa24.73■■□□□ 1.55
VPS13B-204ENST00000441350 LDHDQ86WU2 507 aa24.73■■□□□ 1.55
VPS13B-204ENST00000441350 GLIS2Q9BZE0 524 aaPredicted RBP24.73■■□□□ 1.55
VPS13B-204ENST00000441350 ZNF112Q9UJU3 913 aa24.73■■□□□ 1.55
VPS13B-204ENST00000441350 CCDC69A6NI79 296 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms