RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 CTAGE15A4D2H0 777 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 CTAGE8P0CG41 777 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 AKAP17AQ02040 695 aaKnown RBP19.06■□□□□ 0.64
PMS1-213ENST00000441310 CTAGE6Q86UF2 777 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 CTAGE4Q8IX94 777 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 KCNG4Q8TDN1 519 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 BCL9O00512 1426 aa19.06■□□□□ 0.64
PMS1-213ENST00000441310 CNPY4Q8N129 248 aa19.05■□□□□ 0.64
PMS1-213ENST00000441310 TTLL11Q8NHH1 800 aa19.05■□□□□ 0.64
PMS1-213ENST00000441310 UBR2Q8IWV8 1755 aa19.05■□□□□ 0.64
PMS1-213ENST00000441310 TBX2Q13207 712 aaPredicted RBP19.05■□□□□ 0.64
PMS1-213ENST00000441310 SMIM5Q71RC9 77 aa19.05■□□□□ 0.64
PMS1-213ENST00000441310 CPLX3Q8WVH0 158 aa19.05■□□□□ 0.64
PMS1-213ENST00000441310 SPECC1LQ69YQ0 1117 aa19.04■□□□□ 0.64
PMS1-213ENST00000441310 NHSL1Q5SYE7 1610 aa19.04■□□□□ 0.64
PMS1-213ENST00000441310 KCNQ2O43526 872 aa19.04■□□□□ 0.64
PMS1-213ENST00000441310 IBSPP21815 317 aaPredicted RBP19.04■□□□□ 0.64
PMS1-213ENST00000441310 SCP2P22307 547 aa19.04■□□□□ 0.64
PMS1-213ENST00000441310 GBP6Q6ZN66 633 aa19.04■□□□□ 0.64
PMS1-213ENST00000441310 STOX1Q6ZVD7 989 aa19.04■□□□□ 0.64
PMS1-213ENST00000441310 GJB4Q9NTQ9 266 aa19.04■□□□□ 0.64
PMS1-213ENST00000441310 MYH15Q9Y2K3 1946 aa19.04■□□□□ 0.64
PMS1-213ENST00000441310 MROH7-TTC4A0A0A0MT08 1334 aa19.04■□□□□ 0.64
PMS1-213ENST00000441310 INPP5BP32019 993 aa19.04■□□□□ 0.64
PMS1-213ENST00000441310 ZAP70P43403 619 aa19.04■□□□□ 0.64
PMS1-213ENST00000441310 TRIM28Q13263 835 aaKnown RBP19.04■□□□□ 0.64
PMS1-213ENST00000441310 SLC35F6Q8N357 371 aa19.04■□□□□ 0.64
PMS1-213ENST00000441310 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.04■□□□□ 0.64
PMS1-213ENST00000441310 KAT14Q9H8E8 782 aa19.04■□□□□ 0.64
PMS1-213ENST00000441310 CTAGE9A4FU28 777 aa19.03■□□□□ 0.64
PMS1-213ENST00000441310 PRPF6O94906 941 aaKnown RBP19.03■□□□□ 0.64
PMS1-213ENST00000441310 SYKP43405 635 aa19.03■□□□□ 0.64
PMS1-213ENST00000441310 HAND2P61296 217 aa19.03■□□□□ 0.64
PMS1-213ENST00000441310 MARCH10Q8NA82 808 aaPredicted RBP19.03■□□□□ 0.64
PMS1-213ENST00000441310 CDC5LQ99459 802 aaKnown RBP19.03■□□□□ 0.64
PMS1-213ENST00000441310 SATB1Q01826 763 aa19.03■□□□□ 0.64
PMS1-213ENST00000441310 GIMAP7Q8NHV1 300 aa19.03■□□□□ 0.64
PMS1-213ENST00000441310 SETQ01105 290 aaPredicted RBP19.02■□□□□ 0.64
PMS1-213ENST00000441310 PDE4BQ07343 736 aa19.02■□□□□ 0.64
PMS1-213ENST00000441310 CPLX2Q6PUV4 134 aaKnown RBP19.02■□□□□ 0.64
PMS1-213ENST00000441310 RAD9BQ6WBX8 426 aa19.02■□□□□ 0.64
PMS1-213ENST00000441310 SYNE3Q6ZMZ3 975 aa19.02■□□□□ 0.64
PMS1-213ENST00000441310 CAPN7Q9Y6W3 813 aa19.02■□□□□ 0.64
PMS1-213ENST00000441310 PATL2C9JE40 543 aaKnown RBP19.02■□□□□ 0.64
PMS1-213ENST00000441310 CIAO1O76071 339 aa19.02■□□□□ 0.64
PMS1-213ENST00000441310 PPP2R5AQ15172 486 aa19.02■□□□□ 0.64
PMS1-213ENST00000441310 OSBP2Q969R2 916 aa19.02■□□□□ 0.64
PMS1-213ENST00000441310 SAMM50Q9Y512 469 aa19.02■□□□□ 0.64
PMS1-213ENST00000441310 CARMIL3Q8ND23 1372 aa19.02■□□□□ 0.64
PMS1-213ENST00000441310 UBN2Q6ZU65 1347 aa19.02■□□□□ 0.63
PMS1-213ENST00000441310 H0YHG0 523 aa19.02■□□□□ 0.63
PMS1-213ENST00000441310 M0R2C6 588 aa19.02■□□□□ 0.63
PMS1-213ENST00000441310 USPL1Q5W0Q7 1092 aa19.02■□□□□ 0.63
PMS1-213ENST00000441310 GPR108Q9NPR9 543 aa19.02■□□□□ 0.63
PMS1-213ENST00000441310 ADGRG1Q9Y653 693 aa19.02■□□□□ 0.63
PMS1-213ENST00000441310 U3KPZ7 1027 aaPredicted RBP19.02■□□□□ 0.63
PMS1-213ENST00000441310 CDHR2Q9BYE9 1310 aa19.01■□□□□ 0.63
PMS1-213ENST00000441310 ROBO1Q9Y6N7 1651 aa19.01■□□□□ 0.63
PMS1-213ENST00000441310 CSF1RP07333 972 aa19.01■□□□□ 0.63
PMS1-213ENST00000441310 CTSWP56202 376 aa19.01■□□□□ 0.63
PMS1-213ENST00000441310 TTC19Q6DKK2 380 aaPredicted RBP19.01■□□□□ 0.63
PMS1-213ENST00000441310 NCAPH2Q6IBW4 605 aa19.01■□□□□ 0.63
PMS1-213ENST00000441310 RPAINQ86UA6 219 aa19.01■□□□□ 0.63
PMS1-213ENST00000441310 BCAS4Q8TDM0 211 aa19.01■□□□□ 0.63
PMS1-213ENST00000441310 MAST3O60307 1309 aa19.01■□□□□ 0.63
PMS1-213ENST00000441310 DISP2A7MBM2 1401 aa19.01■□□□□ 0.63
PMS1-213ENST00000441310 RNF113AO15541 343 aaKnown RBP19.01■□□□□ 0.63
PMS1-213ENST00000441310 CDC27P30260 824 aa19.01■□□□□ 0.63
PMS1-213ENST00000441310 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.01■□□□□ 0.63
PMS1-213ENST00000441310 TRMT44Q8IYL2 757 aaKnown RBP19.01■□□□□ 0.63
PMS1-213ENST00000441310 TUBE1Q9UJT0 475 aa19.01■□□□□ 0.63
PMS1-213ENST00000441310 TJP1Q07157 1748 aa19.01■□□□□ 0.63
PMS1-213ENST00000441310 NUP188Q5SRE5 1749 aa19.01■□□□□ 0.63
PMS1-213ENST00000441310 ANKRD18BA2A2Z9 1011 aa19■□□□□ 0.63
PMS1-213ENST00000441310 MYO1FO00160 1098 aa19■□□□□ 0.63
PMS1-213ENST00000441310 YEATS4O95619 227 aa19■□□□□ 0.63
PMS1-213ENST00000441310 HSPD1P10809 573 aaKnown RBP19■□□□□ 0.63
PMS1-213ENST00000441310 ABL1P00519 1130 aa19■□□□□ 0.63
PMS1-213ENST00000441310 FDPSP14324 419 aaKnown RBP19■□□□□ 0.63
PMS1-213ENST00000441310 ZMYM1Q5SVZ6 1142 aa19■□□□□ 0.63
PMS1-213ENST00000441310 MYSM1Q5VVJ2 828 aa19■□□□□ 0.63
PMS1-213ENST00000441310 DHX32Q7L7V1 743 aaKnown RBP19■□□□□ 0.63
PMS1-213ENST00000441310 CMA1P23946 247 aa19■□□□□ 0.63
PMS1-213ENST00000441310 GGCXP38435 758 aa19■□□□□ 0.63
PMS1-213ENST00000441310 CRKLP46109 303 aaKnown RBP19■□□□□ 0.63
PMS1-213ENST00000441310 IRAK1P51617 712 aa19■□□□□ 0.63
PMS1-213ENST00000441310 HPCAL4Q9UM19 191 aa19■□□□□ 0.63
PMS1-213ENST00000441310 SPATA31A1Q5TZJ5 1347 aa18.99■□□□□ 0.63
PMS1-213ENST00000441310 ITGB4P16144 1822 aa18.99■□□□□ 0.63
PMS1-213ENST00000441310 ZMYND10O75800 440 aa18.99■□□□□ 0.63
PMS1-213ENST00000441310 ITPK1Q13572 414 aa18.99■□□□□ 0.63
PMS1-213ENST00000441310 CTCFLQ8NI51 663 aaPredicted RBP18.99■□□□□ 0.63
PMS1-213ENST00000441310 FAM76AQ8TAV0 307 aa18.99■□□□□ 0.63
PMS1-213ENST00000441310 C8orf76Q96K31 380 aa18.99■□□□□ 0.63
PMS1-213ENST00000441310 POLR3EQ9NVU0 708 aa18.99■□□□□ 0.63
PMS1-213ENST00000441310 NFE2L3Q9Y4A8 694 aa18.99■□□□□ 0.63
PMS1-213ENST00000441310 RIPOR2Q9Y4F9 1068 aa18.99■□□□□ 0.63
PMS1-213ENST00000441310 CCDC189A1A4V9 331 aa18.99■□□□□ 0.63
PMS1-213ENST00000441310 FAM98CQ17RN3 349 aaKnown RBP18.99■□□□□ 0.63
PMS1-213ENST00000441310 RAB11FIP4Q86YS3 637 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms