RNA–Protein interactions for RNA: ENST00000440186.5

PTPN12-207, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 1 (best)

Gene PTPN12, Length 159 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-207ENST00000440186 C9orf131Q5VYM1 1079 aa4.46□□□□□ -1.7
PTPN12-207ENST00000440186 INTS5Q6P9B9 1019 aaKnown RBP4.46□□□□□ -1.7
PTPN12-207ENST00000440186 NT5DC4Q86YG4 428 aa4.46□□□□□ -1.7
PTPN12-207ENST00000440186 ACSF2Q96CM8 615 aaPredicted RBP4.46□□□□□ -1.7
PTPN12-207ENST00000440186 MIPEPQ99797 713 aa4.46□□□□□ -1.7
PTPN12-207ENST00000440186 DPH2Q9BQC3 489 aaPredicted RBP4.46□□□□□ -1.7
PTPN12-207ENST00000440186 NT5C1AQ9BXI3 368 aa4.46□□□□□ -1.7
PTPN12-207ENST00000440186 LRRC4CQ9HCJ2 640 aa4.46□□□□□ -1.7
PTPN12-207ENST00000440186 REV1Q9UBZ9 1251 aa4.46□□□□□ -1.7
PTPN12-207ENST00000440186 PRR36Q9H6K5 1346 aa4.46□□□□□ -1.7
PTPN12-207ENST00000440186 KIAA1324LA8MWY0 1029 aaPredicted RBP4.45□□□□□ -1.7
PTPN12-207ENST00000440186 CYP26A1O43174 497 aa4.45□□□□□ -1.7
PTPN12-207ENST00000440186 SLITRK5O94991 958 aa4.45□□□□□ -1.7
PTPN12-207ENST00000440186 HTR3BO95264 441 aa4.45□□□□□ -1.7
PTPN12-207ENST00000440186 MED26O95402 600 aa4.45□□□□□ -1.7
PTPN12-207ENST00000440186 SPINK2P20155 84 aa4.45□□□□□ -1.7
PTPN12-207ENST00000440186 MSMPQ1L6U9 139 aa4.45□□□□□ -1.7
PTPN12-207ENST00000440186 SEZ6Q53EL9 994 aa4.45□□□□□ -1.7
PTPN12-207ENST00000440186 TMEM201Q5SNT2 666 aa4.45□□□□□ -1.7
PTPN12-207ENST00000440186 ARTNQ5T4W7 220 aa4.45□□□□□ -1.7
PTPN12-207ENST00000440186 SLC6A19Q695T7 634 aa4.45□□□□□ -1.7
PTPN12-207ENST00000440186 ZNF654Q8IZM8 581 aa4.45□□□□□ -1.7
PTPN12-207ENST00000440186 FAM181AQ8N9Y4 354 aa4.45□□□□□ -1.7
PTPN12-207ENST00000440186 EAF1Q96JC9 268 aaPredicted RBP4.45□□□□□ -1.7
PTPN12-207ENST00000440186 BRMS1Q9HCU9 246 aa4.45□□□□□ -1.7
PTPN12-207ENST00000440186 U3KQE9 123 aa4.45□□□□□ -1.7
PTPN12-207ENST00000440186 DNAJA2O60884 412 aa4.44□□□□□ -1.7
PTPN12-207ENST00000440186 EOMESO95936 686 aa4.44□□□□□ -1.7
PTPN12-207ENST00000440186 LETMD1Q6P1Q0 360 aa4.44□□□□□ -1.7
PTPN12-207ENST00000440186 FAM214BQ7L5A3 538 aa4.44□□□□□ -1.7
PTPN12-207ENST00000440186 MCATQ8IVS2 390 aaKnown RBP4.44□□□□□ -1.7
PTPN12-207ENST00000440186 SLITRK4Q8IW52 837 aa4.44□□□□□ -1.7
PTPN12-207ENST00000440186 MFSD2AQ8NA29 543 aa4.44□□□□□ -1.7
PTPN12-207ENST00000440186 FAM13CQ8NE31 585 aa4.44□□□□□ -1.7
PTPN12-207ENST00000440186 XAGE3Q8WTP9 111 aa4.44□□□□□ -1.7
PTPN12-207ENST00000440186 NKD1Q969G9 470 aa4.44□□□□□ -1.7
PTPN12-207ENST00000440186 PCMTD2Q9NV79 361 aa4.44□□□□□ -1.7
PTPN12-207ENST00000440186 ZC3H7BQ9UGR2 993 aaKnown RBP4.44□□□□□ -1.7
PTPN12-207ENST00000440186 KLHL3Q9UH77 587 aa4.44□□□□□ -1.7
PTPN12-207ENST00000440186 PCDHB14Q9Y5E9 798 aa4.44□□□□□ -1.7
PTPN12-207ENST00000440186 HYAL3O43820 417 aaPredicted RBP4.43□□□□□ -1.7
PTPN12-207ENST00000440186 ATE1O95260 518 aa4.43□□□□□ -1.7
PTPN12-207ENST00000440186 YARSP54577 528 aaKnown RBP4.43□□□□□ -1.7
PTPN12-207ENST00000440186 RAD51AP2Q09MP3 1159 aa4.43□□□□□ -1.7
PTPN12-207ENST00000440186 PAK2Q13177 524 aa4.43□□□□□ -1.7
PTPN12-207ENST00000440186 DTX1Q86Y01 620 aa4.43□□□□□ -1.7
PTPN12-207ENST00000440186 REXO1Q8N1G1 1221 aaKnown RBP4.43□□□□□ -1.7
PTPN12-207ENST00000440186 Q8N3U1 123 aa4.43□□□□□ -1.7
PTPN12-207ENST00000440186 CYB5D2Q8WUJ1 264 aa4.43□□□□□ -1.7
PTPN12-207ENST00000440186 HEXIM2Q96MH2 286 aaKnown RBP4.43□□□□□ -1.7
PTPN12-207ENST00000440186 TGIF2Q9GZN2 237 aa4.43□□□□□ -1.7
PTPN12-207ENST00000440186 ZFP64Q9NPA5 681 aa4.43□□□□□ -1.7
PTPN12-207ENST00000440186 PRDM5Q9NQX1 630 aaPredicted RBP4.43□□□□□ -1.7
PTPN12-207ENST00000440186 GTF2IRD1Q9UHL9 959 aa4.43□□□□□ -1.7
PTPN12-207ENST00000440186 MAPK8IP1Q9UQF2 711 aa4.43□□□□□ -1.7
PTPN12-207ENST00000440186 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.43□□□□□ -1.7
PTPN12-207ENST00000440186 UPK3BL1B0FP48 263 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 CHURC1-FNTBB4DL54 471 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 UPK3BL2E5RIL1 263 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 IGF2BP3O00425 579 aaKnown RBP eCLIP4.42□□□□□ -1.7
PTPN12-207ENST00000440186 CEACAM5P06731 702 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 ITIH2P19823 946 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 MCM4P33991 863 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 ZNF165P49910 485 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 OXCT1P55809 520 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 CLCQ05315 142 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 OVOS1Q6IE37 1185 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 GK5Q6ZS86 529 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 ARHGAP27Q6ZUM4 889 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 SLFN12Q8IYM2 578 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 PLD6Q8N2A8 252 aaKnown RBP4.42□□□□□ -1.7
PTPN12-207ENST00000440186 DNAJB8Q8NHS0 232 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 CCSER2Q9H7U1 834 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 EHMT1Q9H9B1 1298 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 MKNK2Q9HBH9 465 aa4.42□□□□□ -1.7
PTPN12-207ENST00000440186 TPX2Q9ULW0 747 aaKnown RBP4.42□□□□□ -1.7
PTPN12-207ENST00000440186 GNAT3A8MTJ3 354 aa4.41□□□□□ -1.7
PTPN12-207ENST00000440186 PRNPP04156 253 aa4.41□□□□□ -1.7
PTPN12-207ENST00000440186 ERCC5P28715 1186 aaPredicted RBP4.41□□□□□ -1.7
PTPN12-207ENST00000440186 MLECQ14165 292 aa4.41□□□□□ -1.7
PTPN12-207ENST00000440186 SFRP5Q5T4F7 317 aa4.41□□□□□ -1.7
PTPN12-207ENST00000440186 ZNF746Q6NUN9 644 aaPredicted RBP4.41□□□□□ -1.7
PTPN12-207ENST00000440186 C22orf34Q6ZV56 151 aa4.41□□□□□ -1.7
PTPN12-207ENST00000440186 CDH24Q86UP0 819 aa4.41□□□□□ -1.7
PTPN12-207ENST00000440186 VSIG10LQ86VR7 867 aa4.41□□□□□ -1.7
PTPN12-207ENST00000440186 RIN3Q8TB24 985 aa4.41□□□□□ -1.7
PTPN12-207ENST00000440186 NETO1Q8TDF5 533 aa4.41□□□□□ -1.7
PTPN12-207ENST00000440186 GPRASP2Q96D09 838 aa4.41□□□□□ -1.7
PTPN12-207ENST00000440186 ACBD3Q9H3P7 528 aa4.41□□□□□ -1.7
PTPN12-207ENST00000440186 BSDC1Q9NW68 430 aaPredicted RBP4.41□□□□□ -1.7
PTPN12-207ENST00000440186 GMIPQ9P107 970 aa4.41□□□□□ -1.7
PTPN12-207ENST00000440186 ZNRF3Q9ULT6 936 aa4.41□□□□□ -1.7
PTPN12-207ENST00000440186 CNTNAP4Q9C0A0 1308 aa4.41□□□□□ -1.7
PTPN12-207ENST00000440186 SLC22A31A6NKX4 558 aa4.4□□□□□ -1.71
PTPN12-207ENST00000440186 MEIS3P2A8K0S8 358 aa4.4□□□□□ -1.71
PTPN12-207ENST00000440186 ADAMTS4O75173 837 aa4.4□□□□□ -1.71
PTPN12-207ENST00000440186 ETV3P41162 512 aa4.4□□□□□ -1.71
PTPN12-207ENST00000440186 GJA8P48165 433 aa4.4□□□□□ -1.71
PTPN12-207ENST00000440186 IFI16Q16666 785 aaKnown RBP4.4□□□□□ -1.71
PTPN12-207ENST00000440186 ARSHQ5FYA8 562 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms