RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 EPC1Q9H2F5 836 aa17.6■□□□□ 0.41
APP-208ENST00000439274 FOXP1Q9H334 677 aaPredicted RBP17.6■□□□□ 0.41
APP-208ENST00000439274 HOOK1Q9UJC3 728 aaKnown RBP17.6■□□□□ 0.41
APP-208ENST00000439274 IQSEC3Q9UPP2 1182 aaPredicted RBP17.6■□□□□ 0.41
APP-208ENST00000439274 ANKRD36CQ5JPF3 1778 aa17.6■□□□□ 0.41
APP-208ENST00000439274 SARSP49591 514 aaKnown RBP17.6■□□□□ 0.41
APP-208ENST00000439274 MNS1Q8NEH6 495 aa17.6■□□□□ 0.41
APP-208ENST00000439274 UBXN4Q92575 508 aa17.6■□□□□ 0.41
APP-208ENST00000439274 WDR24Q96S15 920 aa17.6■□□□□ 0.41
APP-208ENST00000439274 MPHOSPH8Q99549 860 aa17.6■□□□□ 0.41
APP-208ENST00000439274 FHOD1Q9Y613 1164 aa17.6■□□□□ 0.41
APP-208ENST00000439274 NUP98P52948 1817 aa17.6■□□□□ 0.41
APP-208ENST00000439274 ITGB4P16144 1822 aa17.59■□□□□ 0.41
APP-208ENST00000439274 hCG_1642624A0A1W2PR95 340 aa17.59■□□□□ 0.41
APP-208ENST00000439274 ZSCAN12O43309 604 aa17.59■□□□□ 0.41
APP-208ENST00000439274 ACTN4O43707 911 aaKnown RBP17.59■□□□□ 0.41
APP-208ENST00000439274 MYO1BO43795 1136 aa17.59■□□□□ 0.41
APP-208ENST00000439274 TOM1O60784 492 aa17.59■□□□□ 0.41
APP-208ENST00000439274 DEXIO95424 95 aa17.59■□□□□ 0.41
APP-208ENST00000439274 ADAMTS2O95450 1211 aa17.59■□□□□ 0.41
APP-208ENST00000439274 SART3Q15020 963 aaKnown RBP17.59■□□□□ 0.41
APP-208ENST00000439274 SUSD4Q5VX71 490 aa17.59■□□□□ 0.41
APP-208ENST00000439274 ZNF34Q8IZ26 560 aa17.59■□□□□ 0.41
APP-208ENST00000439274 ZNF654Q8IZM8 581 aa17.59■□□□□ 0.41
APP-208ENST00000439274 DESI2Q9BSY9 194 aa17.59■□□□□ 0.41
APP-208ENST00000439274 ERICH2A1L162 156 aa17.59■□□□□ 0.41
APP-208ENST00000439274 TADA3O75528 432 aa17.59■□□□□ 0.41
APP-208ENST00000439274 CASP1P29466 404 aa17.59■□□□□ 0.41
APP-208ENST00000439274 NT5DC1Q5TFE4 455 aa17.59■□□□□ 0.41
APP-208ENST00000439274 SPECC1LQ69YQ0 1117 aa17.59■□□□□ 0.41
APP-208ENST00000439274 FANCBQ8NB91 859 aa17.59■□□□□ 0.41
APP-208ENST00000439274 NID2Q14112 1375 aa17.59■□□□□ 0.41
APP-208ENST00000439274 TIAM2Q8IVF5 1701 aa17.58■□□□□ 0.41
APP-208ENST00000439274 ADGRA1Q86SQ6 560 aa17.58■□□□□ 0.41
APP-208ENST00000439274 MLKLQ8NB16 471 aa17.58■□□□□ 0.41
APP-208ENST00000439274 ENOX1Q8TC92 643 aaKnown RBP17.58■□□□□ 0.41
APP-208ENST00000439274 SDR42E1Q8WUS8 393 aa17.58■□□□□ 0.41
APP-208ENST00000439274 NACAP1Q9BZK3 213 aa17.58■□□□□ 0.41
APP-208ENST00000439274 SRPRBQ9Y5M8 271 aaKnown RBP17.58■□□□□ 0.41
APP-208ENST00000439274 LRP5O75197 1615 aa17.58■□□□□ 0.4
APP-208ENST00000439274 A0A087X0B3 334 aa17.58■□□□□ 0.4
APP-208ENST00000439274 MINDY4BA8MYZ0 360 aa17.58■□□□□ 0.4
APP-208ENST00000439274 GNG11P61952 73 aa17.58■□□□□ 0.4
APP-208ENST00000439274 EARS2Q5JPH6 523 aaKnown RBP17.58■□□□□ 0.4
APP-208ENST00000439274 FCHSD1Q86WN1 690 aa17.58■□□□□ 0.4
APP-208ENST00000439274 ELOA2Q8IYF1 753 aaPredicted RBP17.58■□□□□ 0.4
APP-208ENST00000439274 BMS1Q14692 1282 aaKnown RBP17.57■□□□□ 0.4
APP-208ENST00000439274 DHX58Q96C10 678 aa17.57■□□□□ 0.4
APP-208ENST00000439274 VPS54Q9P1Q0 977 aa17.57■□□□□ 0.4
APP-208ENST00000439274 LRP2BPQ9P2M1 347 aa17.57■□□□□ 0.4
APP-208ENST00000439274 BCL9O00512 1426 aa17.57■□□□□ 0.4
APP-208ENST00000439274 DOCK2Q92608 1830 aa17.57■□□□□ 0.4
APP-208ENST00000439274 PRDM1O75626 825 aa17.57■□□□□ 0.4
APP-208ENST00000439274 PNMA6AP0CW24 399 aaPredicted RBP17.57■□□□□ 0.4
APP-208ENST00000439274 PPARAQ07869 468 aa17.57■□□□□ 0.4
APP-208ENST00000439274 MTF1Q14872 753 aa17.57■□□□□ 0.4
APP-208ENST00000439274 EPSTI1Q96J88 318 aa17.57■□□□□ 0.4
APP-208ENST00000439274 ARAP2Q8WZ64 1704 aa17.56■□□□□ 0.4
APP-208ENST00000439274 UBAP1LF5GYI3 381 aa17.56■□□□□ 0.4
APP-208ENST00000439274 SEC31AO94979 1220 aaKnown RBP17.56■□□□□ 0.4
APP-208ENST00000439274 AFMP43652 599 aa17.56■□□□□ 0.4
APP-208ENST00000439274 KLHL10Q6JEL2 608 aa17.56■□□□□ 0.4
APP-208ENST00000439274 UBAC1Q9BSL1 405 aa17.56■□□□□ 0.4
APP-208ENST00000439274 RAI14Q9P0K7 980 aa17.56■□□□□ 0.4
APP-208ENST00000439274 PNPLA7Q6ZV29 1317 aa17.56■□□□□ 0.4
APP-208ENST00000439274 ERVV-1B6SEH8 477 aa17.56■□□□□ 0.4
APP-208ENST00000439274 WNT7AO00755 349 aa17.56■□□□□ 0.4
APP-208ENST00000439274 TEX33O43247 280 aa17.56■□□□□ 0.4
APP-208ENST00000439274 CASQ1P31415 396 aa17.56■□□□□ 0.4
APP-208ENST00000439274 STX17P56962 302 aa17.56■□□□□ 0.4
APP-208ENST00000439274 KARSQ15046 597 aaKnown RBP17.56■□□□□ 0.4
APP-208ENST00000439274 ZNF579Q8NAF0 562 aaKnown RBP17.56■□□□□ 0.4
APP-208ENST00000439274 DACH1Q9UI36 760 aa17.56■□□□□ 0.4
APP-208ENST00000439274 TNKSO95271 1327 aa17.56■□□□□ 0.4
APP-208ENST00000439274 NUTM2BA6NNL0 878 aaPredicted RBP17.55■□□□□ 0.4
APP-208ENST00000439274 NUTM2EB1AL46 878 aaPredicted RBP17.55■□□□□ 0.4
APP-208ENST00000439274 STX10O60499 249 aa17.55■□□□□ 0.4
APP-208ENST00000439274 GNAT2P19087 354 aa17.55■□□□□ 0.4
APP-208ENST00000439274 PLCD1P51178 756 aa17.55■□□□□ 0.4
APP-208ENST00000439274 NUTM2AQ8IVF1 878 aaPredicted RBP17.55■□□□□ 0.4
APP-208ENST00000439274 CCDC196A0A1B0GTZ2 297 aa17.55■□□□□ 0.4
APP-208ENST00000439274 CD44P16070 742 aaKnown RBP17.55■□□□□ 0.4
APP-208ENST00000439274 CYP7A1P22680 504 aa17.55■□□□□ 0.4
APP-208ENST00000439274 IL6STP40189 918 aaPredicted RBP17.55■□□□□ 0.4
APP-208ENST00000439274 PLA2G4AP47712 749 aa17.55■□□□□ 0.4
APP-208ENST00000439274 NR1I3Q14994 352 aa17.55■□□□□ 0.4
APP-208ENST00000439274 NOM1Q5C9Z4 860 aaKnown RBP17.55■□□□□ 0.4
APP-208ENST00000439274 SMYD4Q8IYR2 804 aaPredicted RBP17.55■□□□□ 0.4
APP-208ENST00000439274 CYP2D7A0A087X1C5 515 aa17.54■□□□□ 0.4
APP-208ENST00000439274 WTIPA6NIX2 430 aaPredicted RBP17.54■□□□□ 0.4
APP-208ENST00000439274 ZRANB2O95218 330 aaKnown RBP eCLIP17.54■□□□□ 0.4
APP-208ENST00000439274 SRRTQ9BXP5 876 aaKnown RBP17.54■□□□□ 0.4
APP-208ENST00000439274 IRX2Q9BZI1 471 aaPredicted RBP17.54■□□□□ 0.4
APP-208ENST00000439274 MRPL44Q9H9J2 332 aaKnown RBP17.54■□□□□ 0.4
APP-208ENST00000439274 ABCF2Q9UG63 623 aa17.54■□□□□ 0.4
APP-208ENST00000439274 CEP131Q9UPN4 1083 aa17.54■□□□□ 0.4
APP-208ENST00000439274 A0A0G2JS52 829 aa17.54■□□□□ 0.4
APP-208ENST00000439274 SOWAHDA6NJG2 315 aa17.54■□□□□ 0.4
APP-208ENST00000439274 EFCAB8A8MWE9 144 aa17.54■□□□□ 0.4
APP-208ENST00000439274 SEC23AQ15436 765 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms