RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CD97P48960 835 aa6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 ETF1P62495 437 aaKnown RBP6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 RACK1P63244 317 aaKnown RBP6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 C9orf131Q5VYM1 1079 aa6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 ARMCX6Q7L4S7 300 aa6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 KIAA0825Q8IV33 1275 aa6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 HID1Q8IV36 788 aa6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 KCT2Q8NC54 265 aa6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 GIMAP7Q8NHV1 300 aa6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 TGIF2Q9GZN2 237 aa6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 PCMTD2Q9NV79 361 aa6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 TJP2Q9UDY2 1190 aa6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 LEMD3Q9Y2U8 911 aa6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 PCDHGB7Q9Y5F8 929 aa6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 U3KQE9 123 aa6.01□□□□□ -1.45
TRAPPC13-204ENST00000438419 TLR3O15455 904 aaKnown RBP6□□□□□ -1.45
TRAPPC13-204ENST00000438419 LRIG2O94898 1065 aa6□□□□□ -1.45
TRAPPC13-204ENST00000438419 BPNT1O95861 308 aa6□□□□□ -1.45
TRAPPC13-204ENST00000438419 FOSL1P15407 271 aa6□□□□□ -1.45
TRAPPC13-204ENST00000438419 TAL1P17542 331 aaPredicted RBP6□□□□□ -1.45
TRAPPC13-204ENST00000438419 SSTR4P31391 388 aa6□□□□□ -1.45
TRAPPC13-204ENST00000438419 CRKP46108 304 aa6□□□□□ -1.45
TRAPPC13-204ENST00000438419 MPP2Q14168 576 aa6□□□□□ -1.45
TRAPPC13-204ENST00000438419 CPSF6Q16630 551 aaKnown RBP eCLIP6□□□□□ -1.45
TRAPPC13-204ENST00000438419 DUSP27Q5VZP5 1158 aa6□□□□□ -1.45
TRAPPC13-204ENST00000438419 TOP6BLQ8N6T0 577 aa6□□□□□ -1.45
TRAPPC13-204ENST00000438419 SPON2Q9BUD6 331 aa6□□□□□ -1.45
TRAPPC13-204ENST00000438419 METTL22Q9BUU2 404 aaPredicted RBP6□□□□□ -1.45
TRAPPC13-204ENST00000438419 CCSER2Q9H7U1 834 aa6□□□□□ -1.45
TRAPPC13-204ENST00000438419 EPB41L3Q9Y2J2 1087 aaPredicted RBP6□□□□□ -1.45
TRAPPC13-204ENST00000438419 PRR36Q9H6K5 1346 aa6□□□□□ -1.45
TRAPPC13-204ENST00000438419 ROBO2Q9HCK4 1378 aa6□□□□□ -1.45
TRAPPC13-204ENST00000438419 RBAK-RBAKDNI3L0D1 243 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 PGRP06401 933 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 JAG1P78504 1218 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 CYP27A1Q02318 531 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 REC114Q7Z4M0 266 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 ACSF2Q96CM8 615 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 EAF1Q96JC9 268 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 LRRC3Q9BY71 257 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 FOXQ1Q9C009 403 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 PRDM10Q9NQV6 1147 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 UBP1Q9NZI7 540 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 KIAA1324LA8MWY0 1029 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 CYP26A1O43174 497 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 GRIN3BO60391 1043 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 SLITRK5O94991 958 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 EOMESO95936 686 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 CST3P01034 146 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 SPINK2P20155 84 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 RAD51AP2Q09MP3 1159 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 MSMPQ1L6U9 139 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 CYP27C1Q4G0S4 372 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 PRAMEF13Q5VWM6 474 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 KRTAP5-3Q6L8H2 238 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 INTS5Q6P9B9 1019 aaKnown RBP5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 MCATQ8IVS2 390 aaKnown RBP5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 MRPL41Q8IXM3 137 aaKnown RBP5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 RIN3Q8TB24 985 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 HEXIM2Q96MH2 286 aaKnown RBP5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 ADAM30Q9UKF2 790 aa5.99□□□□□ -1.45
TRAPPC13-204ENST00000438419 CNTNAP4Q9C0A0 1308 aa5.98□□□□□ -1.45
TRAPPC13-204ENST00000438419 UPK3BL1B0FP48 263 aa5.98□□□□□ -1.45
TRAPPC13-204ENST00000438419 UPK3BL2E5RIL1 263 aa5.98□□□□□ -1.45
TRAPPC13-204ENST00000438419 PLCG1P19174 1290 aa5.98□□□□□ -1.45
TRAPPC13-204ENST00000438419 PDE4BQ07343 736 aa5.98□□□□□ -1.45
TRAPPC13-204ENST00000438419 CWF19L2Q2TBE0 894 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-204ENST00000438419 TMEM201Q5SNT2 666 aa5.98□□□□□ -1.45
TRAPPC13-204ENST00000438419 DTX1Q86Y01 620 aa5.98□□□□□ -1.45
TRAPPC13-204ENST00000438419 TMEM87BQ96K49 555 aa5.98□□□□□ -1.45
TRAPPC13-204ENST00000438419 DPH2Q9BQC3 489 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-204ENST00000438419 NT5C1AQ9BXI3 368 aa5.98□□□□□ -1.45
TRAPPC13-204ENST00000438419 LRRC4CQ9HCJ2 640 aa5.98□□□□□ -1.45
TRAPPC13-204ENST00000438419 BRMS1Q9HCU9 246 aa5.98□□□□□ -1.45
TRAPPC13-204ENST00000438419 ZC3H7BQ9UGR2 993 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-204ENST00000438419 DNAJA2O60884 412 aa5.97□□□□□ -1.45
TRAPPC13-204ENST00000438419 ADAMTS4O75173 837 aa5.97□□□□□ -1.45
TRAPPC13-204ENST00000438419 HTR3BO95264 441 aa5.97□□□□□ -1.45
TRAPPC13-204ENST00000438419 GRIK1P39086 918 aa5.97□□□□□ -1.45
TRAPPC13-204ENST00000438419 APOBRQ0VD83 1088 aa5.97□□□□□ -1.45
TRAPPC13-204ENST00000438419 SLC6A19Q695T7 634 aa5.97□□□□□ -1.45
TRAPPC13-204ENST00000438419 FAM181AQ8N9Y4 354 aa5.97□□□□□ -1.45
TRAPPC13-204ENST00000438419 MFSD2AQ8NA29 543 aa5.97□□□□□ -1.45
TRAPPC13-204ENST00000438419 SPATA32Q96LK8 384 aa5.97□□□□□ -1.45
TRAPPC13-204ENST00000438419 REV1Q9UBZ9 1251 aa5.97□□□□□ -1.45
TRAPPC13-204ENST00000438419 OXCT1P55809 520 aa5.96□□□□□ -1.46
TRAPPC13-204ENST00000438419 SEZ6Q53EL9 994 aa5.96□□□□□ -1.46
TRAPPC13-204ENST00000438419 SLITRK4Q8IW52 837 aa5.96□□□□□ -1.46
TRAPPC13-204ENST00000438419 XAGE3Q8WTP9 111 aa5.96□□□□□ -1.46
TRAPPC13-204ENST00000438419 MIPEPQ99797 713 aa5.96□□□□□ -1.46
TRAPPC13-204ENST00000438419 CHURC1-FNTBB4DL54 471 aa5.95□□□□□ -1.46
TRAPPC13-204ENST00000438419 CLCQ05315 142 aa5.95□□□□□ -1.46
TRAPPC13-204ENST00000438419 PAK2Q13177 524 aa5.95□□□□□ -1.46
TRAPPC13-204ENST00000438419 NFXL1Q6ZNB6 911 aa5.95□□□□□ -1.46
TRAPPC13-204ENST00000438419 NKD1Q969G9 470 aa5.95□□□□□ -1.46
TRAPPC13-204ENST00000438419 GPRASP2Q96D09 838 aa5.95□□□□□ -1.46
TRAPPC13-204ENST00000438419 ACBD3Q9H3P7 528 aa5.95□□□□□ -1.46
TRAPPC13-204ENST00000438419 EHMT1Q9H9B1 1298 aa5.95□□□□□ -1.46
TRAPPC13-204ENST00000438419 PLAGL2Q9UPG8 496 aa5.95□□□□□ -1.46
TRAPPC13-204ENST00000438419 INPP5FQ9Y2H2 1132 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms