RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 ZRSR1Q15695 479 aaKnown RBP10.94□□□□□ -0.66
CUX1-206ENST00000437600 CRY2Q49AN0 593 aa10.94□□□□□ -0.66
CUX1-206ENST00000437600 SHC4Q6S5L8 630 aa10.94□□□□□ -0.66
CUX1-206ENST00000437600 PLA2G4DQ86XP0 818 aa10.94□□□□□ -0.66
CUX1-206ENST00000437600 TDRD7Q8NHU6 1098 aaKnown RBP10.94□□□□□ -0.66
CUX1-206ENST00000437600 ZMYM6O95789 1325 aa10.94□□□□□ -0.66
CUX1-206ENST00000437600 RGL2O15211 777 aa10.94□□□□□ -0.66
CUX1-206ENST00000437600 UFL1O94874 794 aa10.94□□□□□ -0.66
CUX1-206ENST00000437600 ATP1A3P13637 1013 aa10.94□□□□□ -0.66
CUX1-206ENST00000437600 VEGFAP15692 232 aaPredicted RBP10.94□□□□□ -0.66
CUX1-206ENST00000437600 GPSM2P81274 684 aa10.94□□□□□ -0.66
CUX1-206ENST00000437600 STX1AQ16623 288 aa10.94□□□□□ -0.66
CUX1-206ENST00000437600 NOM1Q5C9Z4 860 aaKnown RBP10.94□□□□□ -0.66
CUX1-206ENST00000437600 FAM47AQ5JRC9 791 aa10.94□□□□□ -0.66
CUX1-206ENST00000437600 USP49Q70CQ1 688 aa10.94□□□□□ -0.66
CUX1-206ENST00000437600 GRAMD1CQ8IYS0 662 aa10.94□□□□□ -0.66
CUX1-206ENST00000437600 NACAP1Q9BZK3 213 aa10.94□□□□□ -0.66
CUX1-206ENST00000437600 KIAA1468Q9P260 1216 aa10.94□□□□□ -0.66
CUX1-206ENST00000437600 SLC3A2P08195 630 aaKnown RBP10.93□□□□□ -0.66
CUX1-206ENST00000437600 GOLGA8FQ08AF8 430 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 GOLGA8DPQ0D2H9 430 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 LONRF3Q496Y0 759 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 NSUN4Q96CB9 384 aaKnown RBP10.93□□□□□ -0.66
CUX1-206ENST00000437600 RIOK1Q9BRS2 568 aaKnown RBP10.93□□□□□ -0.66
CUX1-206ENST00000437600 BRIP1Q9BX63 1249 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 PRDM10Q9NQV6 1147 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 SLX4Q8IY92 1834 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 GOLGA6L6A8MZA4 724 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 RIMBP2O15034 1052 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 CYP2D6P10635 497 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 SSRP1Q08945 709 aaKnown RBP10.93□□□□□ -0.66
CUX1-206ENST00000437600 WTAPQ15007 396 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 C2CD5Q86YS7 1000 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 FOXP4Q8IVH2 680 aaPredicted RBP10.93□□□□□ -0.66
CUX1-206ENST00000437600 ANKRD2Q9GZV1 360 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 USP17L12C9JPN9 530 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 USP17L21D6R901 530 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 C6orf229H3BNL8 230 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 SMC2O95347 1197 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 PPARAQ07869 468 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 TRIM29Q14134 588 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 SLC39A14Q15043 492 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 TICAM2Q86XR7 235 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 DZIP1Q86YF9 867 aaKnown RBP10.93□□□□□ -0.66
CUX1-206ENST00000437600 FBXL16Q8N461 479 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 MAP7D2Q96T17 732 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.93□□□□□ -0.66
CUX1-206ENST00000437600 CABP5Q9NP86 173 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 POLR3EQ9NVU0 708 aa10.93□□□□□ -0.66
CUX1-206ENST00000437600 CASP1P29466 404 aa10.92□□□□□ -0.66
CUX1-206ENST00000437600 SYKP43405 635 aa10.92□□□□□ -0.66
CUX1-206ENST00000437600 CPLX2Q6PUV4 134 aaKnown RBP10.92□□□□□ -0.66
CUX1-206ENST00000437600 DIS3L2Q8IYB7 885 aaKnown RBP10.92□□□□□ -0.66
CUX1-206ENST00000437600 KCNG4Q8TDN1 519 aa10.92□□□□□ -0.66
CUX1-206ENST00000437600 RBM17Q96I25 401 aaKnown RBP10.92□□□□□ -0.66
CUX1-206ENST00000437600 ANO10Q9NW15 660 aa10.92□□□□□ -0.66
CUX1-206ENST00000437600 VPS54Q9P1Q0 977 aa10.92□□□□□ -0.66
CUX1-206ENST00000437600 PCDHB6Q9Y5E3 794 aa10.92□□□□□ -0.66
CUX1-206ENST00000437600 BAZ2AQ9UIF9 1905 aaKnown RBP10.92□□□□□ -0.66
CUX1-206ENST00000437600 TOB1P50616 345 aaPredicted RBP10.92□□□□□ -0.66
CUX1-206ENST00000437600 EARS2Q5JPH6 523 aaKnown RBP10.92□□□□□ -0.66
CUX1-206ENST00000437600 UBAC1Q9BSL1 405 aa10.92□□□□□ -0.66
CUX1-206ENST00000437600 IFNKQ9P0W0 207 aa10.92□□□□□ -0.66
CUX1-206ENST00000437600 ZHX1Q9UKY1 873 aaPredicted RBP10.92□□□□□ -0.66
CUX1-206ENST00000437600 V9GY48 417 aaPredicted RBP10.92□□□□□ -0.66
CUX1-206ENST00000437600 NRXN2Q9P2S2 1712 aa10.92□□□□□ -0.66
CUX1-206ENST00000437600 ERICH2A1L162 156 aa10.91□□□□□ -0.66
CUX1-206ENST00000437600 RIOK3O14730 519 aaKnown RBP10.91□□□□□ -0.66
CUX1-206ENST00000437600 COBLO75128 1261 aa10.91□□□□□ -0.66
CUX1-206ENST00000437600 RTN1Q16799 776 aa10.91□□□□□ -0.66
CUX1-206ENST00000437600 CCDC125Q86Z20 511 aa10.91□□□□□ -0.66
CUX1-206ENST00000437600 FANCBQ8NB91 859 aa10.91□□□□□ -0.66
CUX1-206ENST00000437600 SHISA4Q96DD7 197 aa10.91□□□□□ -0.66
CUX1-206ENST00000437600 TMEM87BQ96K49 555 aa10.91□□□□□ -0.66
CUX1-206ENST00000437600 MYH13Q9UKX3 1938 aa10.91□□□□□ -0.66
CUX1-206ENST00000437600 F8W031 263 aaPredicted RBP10.91□□□□□ -0.66
CUX1-206ENST00000437600 WNT7AO00755 349 aa10.91□□□□□ -0.66
CUX1-206ENST00000437600 PPEF1O14829 653 aaPredicted RBP10.91□□□□□ -0.66
CUX1-206ENST00000437600 PLEKHA8P1O95397 391 aa10.91□□□□□ -0.66
CUX1-206ENST00000437600 CEP57L1Q8IYX8 460 aa10.91□□□□□ -0.66
CUX1-206ENST00000437600 STAMQ92783 540 aa10.91□□□□□ -0.66
CUX1-206ENST00000437600 XPO4Q9C0E2 1151 aaKnown RBP10.91□□□□□ -0.66
CUX1-206ENST00000437600 POLLQ9UGP5 575 aa10.91□□□□□ -0.66
CUX1-206ENST00000437600 TNKSO95271 1327 aa10.91□□□□□ -0.66
CUX1-206ENST00000437600 CHD4Q14839 1912 aa10.9□□□□□ -0.66
CUX1-206ENST00000437600 ADAMTS3O15072 1205 aa10.9□□□□□ -0.66
CUX1-206ENST00000437600 SKILP12757 684 aa10.9□□□□□ -0.66
CUX1-206ENST00000437600 PTPAQ15257 358 aa10.9□□□□□ -0.66
CUX1-206ENST00000437600 TPD52L1Q16890 204 aaPredicted RBP10.9□□□□□ -0.66
CUX1-206ENST00000437600 BRAPQ7Z569 592 aa10.9□□□□□ -0.66
CUX1-206ENST00000437600 LRRC8AQ8IWT6 810 aa10.9□□□□□ -0.66
CUX1-206ENST00000437600 MAP3K14Q99558 947 aa10.9□□□□□ -0.66
CUX1-206ENST00000437600 ARAP2Q8WZ64 1704 aa10.9□□□□□ -0.66
CUX1-206ENST00000437600 XDHP47989 1333 aa10.9□□□□□ -0.66
CUX1-206ENST00000437600 CTAGE5O15320 804 aa10.9□□□□□ -0.66
CUX1-206ENST00000437600 USP17L8P0C7I0 530 aa10.9□□□□□ -0.66
CUX1-206ENST00000437600 ZNF654Q8IZM8 581 aa10.9□□□□□ -0.66
CUX1-206ENST00000437600 H0YIN7 160 aa10.9□□□□□ -0.67
CUX1-206ENST00000437600 YEATS4O95619 227 aa10.9□□□□□ -0.67
CUX1-206ENST00000437600 GNAT2P19087 354 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms