RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 MMP10P09238 476 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 SLC4A3P48751 1232 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 GPSM2P81274 684 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 LSM11P83369 360 aaKnown RBP eCLIP6.53□□□□□ -1.36
RFC3-202ENST00000434425 ARID5AQ03989 594 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 PPP2R5AQ15172 486 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 GRAMD1BQ3KR37 738 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 KMT5BQ4FZB7 885 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 HYIQ5T013 277 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 ERAP2Q6P179 960 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 ARHGAP27Q6ZUM4 889 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 ARL6IP6Q8N6S5 226 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 NKAIN3Q8N8D7 197 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 APPL2Q8NEU8 664 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 GIMAP1Q8WWP7 306 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 ZNF496Q96IT1 587 aaPredicted RBP6.53□□□□□ -1.36
RFC3-202ENST00000434425 PAWRQ96IZ0 340 aaKnown RBP6.53□□□□□ -1.36
RFC3-202ENST00000434425 MAP3K14Q99558 947 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 TSPY26PQ9H489 355 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 C12orf49Q9H741 205 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 NMRK2Q9NPI5 230 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 HOXC10Q9NYD6 342 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 HDAC9Q9UKV0 1011 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 BCS1LQ9Y276 419 aa6.53□□□□□ -1.36
RFC3-202ENST00000434425 MYBBP1AQ9BQG0 1328 aaKnown RBP6.52□□□□□ -1.37
RFC3-202ENST00000434425 FANCIQ9NVI1 1328 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 K7ELQ4 463 aaPredicted RBP6.52□□□□□ -1.37
RFC3-202ENST00000434425 CTAGE5O15320 804 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 KIF5CO60282 957 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 NR1I2O75469 434 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 NBPF7P0C2Y1 421 aaPredicted RBP6.52□□□□□ -1.37
RFC3-202ENST00000434425 CCDC159P0C7I6 412 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 BCAMP50895 628 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 NAP1L1P55209 391 aaKnown RBP6.52□□□□□ -1.37
RFC3-202ENST00000434425 GEMIN4P57678 1058 aaKnown RBP6.52□□□□□ -1.37
RFC3-202ENST00000434425 EXOSC10Q01780 885 aaKnown RBP6.52□□□□□ -1.37
RFC3-202ENST00000434425 Q3C1V9 767 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 ALFQ53S48 1182 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 COL13A1Q5TAT6 717 aaPredicted RBP6.52□□□□□ -1.37
RFC3-202ENST00000434425 RETREG3Q86VR2 466 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 BRSK2Q8IWQ3 736 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 HELQQ8TDG4 1101 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 E2F7Q96AV8 911 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 LRCH3Q96II8 777 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 TMEM87BQ96K49 555 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 ATG3Q9NT62 314 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.52□□□□□ -1.37
RFC3-202ENST00000434425 IP6K2Q9UHH9 426 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 FBXO2Q9UK22 296 aaPredicted RBP6.52□□□□□ -1.37
RFC3-202ENST00000434425 NUDCQ9Y266 331 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 CEP83Q9Y592 693 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 EMILIN1Q9Y6C2 1016 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 RTL1A6NKG5 1358 aa6.52□□□□□ -1.37
RFC3-202ENST00000434425 KIF13BQ9NQT8 1826 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 TMEM110-MUSTN1A8MSY1 372 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 DIAPH1O60610 1272 aaKnown RBP6.51□□□□□ -1.37
RFC3-202ENST00000434425 TPM2P07951 284 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 U2AF1L5P0DN76 240 aaPredicted RBP6.51□□□□□ -1.37
RFC3-202ENST00000434425 DPEP1P16444 411 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 LMNB1P20700 586 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 KCNA3P22001 575 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 ZNF131P52739 623 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 TGFB2P61812 414 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 CCT2P78371 535 aaKnown RBP6.51□□□□□ -1.37
RFC3-202ENST00000434425 U2AF1Q01081 240 aaKnown RBP eCLIP6.51□□□□□ -1.37
RFC3-202ENST00000434425 PTK7Q13308 1070 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 WASHC4Q2M389 1173 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 ZNF394Q53GI3 561 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 EAPPQ56P03 285 aaPredicted RBP6.51□□□□□ -1.37
RFC3-202ENST00000434425 TRAPPC3LQ5T215 181 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 JAKMIP3Q5VZ66 844 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 ARMC3Q5W041 872 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 MCF2L2Q86YR7 1114 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 FAM43AQ8N2R8 423 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 ATRIPQ8WXE1 791 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 JARID2Q92833 1246 aaPredicted RBP6.51□□□□□ -1.37
RFC3-202ENST00000434425 RNF34Q969K3 372 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 CENPTQ96BT3 561 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 TBC1D20Q96BZ9 403 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 ZNF594Q96JF6 807 aaPredicted RBP6.51□□□□□ -1.37
RFC3-202ENST00000434425 SLC4A9Q96Q91 983 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 IWS1Q96ST2 819 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 FAM167BQ9BTA0 163 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 XPO4Q9C0E2 1151 aaKnown RBP6.51□□□□□ -1.37
RFC3-202ENST00000434425 RIC8AQ9NPQ8 531 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 HOMER2Q9NSB8 354 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 DCAF16Q9NXF7 216 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 PARP2Q9UGN5 583 aa6.51□□□□□ -1.37
RFC3-202ENST00000434425 KIAA1551Q9HCM1 1747 aa6.5□□□□□ -1.37
RFC3-202ENST00000434425 PXDNLA1KZ92 1463 aa6.5□□□□□ -1.37
RFC3-202ENST00000434425 FGRP09769 529 aa6.5□□□□□ -1.37
RFC3-202ENST00000434425 TMF1P82094 1093 aa6.5□□□□□ -1.37
RFC3-202ENST00000434425 TMED1Q13445 227 aa6.5□□□□□ -1.37
RFC3-202ENST00000434425 MORC3Q14149 939 aa6.5□□□□□ -1.37
RFC3-202ENST00000434425 C16orf54Q6UWD8 224 aa6.5□□□□□ -1.37
RFC3-202ENST00000434425 TMEM87AQ8NBN3 555 aa6.5□□□□□ -1.37
RFC3-202ENST00000434425 CARD14Q9BXL6 1004 aa6.5□□□□□ -1.37
RFC3-202ENST00000434425 SRRTQ9BXP5 876 aaKnown RBP6.5□□□□□ -1.37
RFC3-202ENST00000434425 PPCSQ9HAB8 311 aa6.5□□□□□ -1.37
RFC3-202ENST00000434425 PTPRHQ9HD43 1115 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms