RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 PTPN21Q16825 1174 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 RRAGAQ7L523 313 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 CCDC13Q8IYE1 715 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 CCDC89Q8N998 374 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 DPH5Q9H2P9 285 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
SEC16A-206ENST00000431893 PCF11O94913 1555 aaKnown RBP12.68□□□□□ -0.38
SEC16A-206ENST00000431893 GIPC1O14908 333 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 MX2P20592 715 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 DCUN1D2Q6PH85 259 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 SEPT10Q9P0V9 454 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 JAK2O60674 1132 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 STRN3Q13033 797 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.68□□□□□ -0.38
SEC16A-206ENST00000431893 CCDC117Q8IWD4 279 aaPredicted RBP12.68□□□□□ -0.38
SEC16A-206ENST00000431893 DCLK2Q8N568 766 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 LSM14BQ9BX40 385 aaKnown RBP12.68□□□□□ -0.38
SEC16A-206ENST00000431893 ANO3Q9BYT9 981 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 MRPL46Q9H2W6 279 aaKnown RBP12.68□□□□□ -0.38
SEC16A-206ENST00000431893 EFCC1Q9HA90 598 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 GRIN2BQ13224 1484 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 PEX26Q7Z412 305 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 CTAGE3PQ8IX95 158 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.68□□□□□ -0.38
SEC16A-206ENST00000431893 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.68□□□□□ -0.38
SEC16A-206ENST00000431893 TTC41PQ6P2S7 1318 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 RSPH3Q86UC2 560 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 DDX41Q9UJV9 622 aaKnown RBP12.68□□□□□ -0.38
SEC16A-206ENST00000431893 STX2P32856 288 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 CTNNA1P35221 906 aaKnown RBP12.68□□□□□ -0.38
SEC16A-206ENST00000431893 ADCY1Q08828 1119 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 ZSCAN26Q16670 478 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 SLC9C1Q4G0N8 1177 aa12.68□□□□□ -0.38
SEC16A-206ENST00000431893 MAP3K1Q13233 1512 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 IL16Q14005 1332 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 STK10O94804 968 aaKnown RBP12.67□□□□□ -0.38
SEC16A-206ENST00000431893 MAGEA1P43355 309 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 KLHL30Q0D2K2 578 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 PRKG1Q13976 671 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 PLCD1P51178 756 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 PAK2Q13177 524 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 TRIM14Q14142 442 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 PPP2R5AQ15172 486 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 TTC38Q5R3I4 469 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 MRPL44Q9H9J2 332 aaKnown RBP12.67□□□□□ -0.38
SEC16A-206ENST00000431893 POSTNQ15063 836 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 VWA3BQ502W6 1294 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 PHLDB2Q86SQ0 1253 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 LCA5Q86VQ0 697 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 CCDC24Q8N4L8 307 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 U2AF1L4Q8WU68 220 aaKnown RBP12.67□□□□□ -0.38
SEC16A-206ENST00000431893 SPECC1L-ADORA2AF8WAN1 911 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 ARHGAP25P42331 645 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 RPS6KA1Q15418 735 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 AATFQ9NY61 560 aaKnown RBP eCLIP12.67□□□□□ -0.38
SEC16A-206ENST00000431893 SCAF11Q99590 1463 aaKnown RBP12.67□□□□□ -0.38
SEC16A-206ENST00000431893 SFMBT2Q5VUG0 894 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.67□□□□□ -0.38
SEC16A-206ENST00000431893 SNX29Q8TEQ0 813 aa12.67□□□□□ -0.38
SEC16A-206ENST00000431893 TSPYL2Q9H2G4 693 aaPredicted RBP12.67□□□□□ -0.38
SEC16A-206ENST00000431893 GOLGA8FQ08AF8 430 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 GOLGA8DPQ0D2H9 430 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 XAB2Q9HCS7 855 aaKnown RBP12.66□□□□□ -0.38
SEC16A-206ENST00000431893 NFE2L3Q9Y4A8 694 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 GJA3Q9Y6H8 435 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 EIF4A2Q14240 407 aaKnown RBP12.66□□□□□ -0.38
SEC16A-206ENST00000431893 G2E3Q7L622 706 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 C2CD5Q86YS7 1000 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 ARHGAP45Q92619 1136 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 ARHGEF35A5YM69 484 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 CASP2P42575 452 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 ANKRD20A3Q5VUR7 823 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 AFAP1L2Q8N4X5 818 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 XPO4Q9C0E2 1151 aaKnown RBP12.66□□□□□ -0.38
SEC16A-206ENST00000431893 BZW2Q9Y6E2 419 aaKnown RBP12.66□□□□□ -0.38
SEC16A-206ENST00000431893 RGS16O15492 202 aaPredicted RBP12.66□□□□□ -0.38
SEC16A-206ENST00000431893 CD19P15391 556 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 SMTNP53814 917 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 CFAP221Q4G0U5 840 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 RUFY4Q6ZNE9 571 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 PLCB1Q9NQ66 1216 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 CLTAP09496 248 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 FOXD4Q12950 439 aaPredicted RBP12.66□□□□□ -0.38
SEC16A-206ENST00000431893 TEX11Q8IYF3 940 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 KRT12Q99456 494 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 DCTPP1Q9H773 170 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 RAD50Q92878 1312 aa12.66□□□□□ -0.38
SEC16A-206ENST00000431893 KCNK3O14649 394 aa12.65□□□□□ -0.38
SEC16A-206ENST00000431893 TAF5LO75529 589 aa12.65□□□□□ -0.38
SEC16A-206ENST00000431893 HERC4Q5GLZ8 1057 aaPredicted RBP12.65□□□□□ -0.38
SEC16A-206ENST00000431893 PALM2Q8IXS6 379 aa12.65□□□□□ -0.38
SEC16A-206ENST00000431893 SCYL1Q96KG9 808 aa12.65□□□□□ -0.38
SEC16A-206ENST00000431893 NACA2Q9H009 215 aa12.65□□□□□ -0.38
SEC16A-206ENST00000431893 DEXIO95424 95 aa12.65□□□□□ -0.38
SEC16A-206ENST00000431893 IFIH1Q9BYX4 1025 aaKnown RBP12.65□□□□□ -0.38
SEC16A-206ENST00000431893 SEC31AO94979 1220 aaKnown RBP12.65□□□□□ -0.38
SEC16A-206ENST00000431893 IFRD2Q12894 506 aaPredicted RBP12.65□□□□□ -0.38
SEC16A-206ENST00000431893 KAZNQ674X7 775 aa12.65□□□□□ -0.38
SEC16A-206ENST00000431893 BIN2Q9UBW5 565 aaPredicted RBP12.65□□□□□ -0.38
SEC16A-206ENST00000431893 SERTAD1Q9UHV2 236 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 204.2 ms