RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 ELF2Q15723 593 aa21.22■□□□□ 0.99
CHD1L-204ENST00000431239 PHLPP1O60346 1717 aa21.22■□□□□ 0.99
CHD1L-204ENST00000431239 KDM4FA0A1W2PPD8 638 aa21.22■□□□□ 0.99
CHD1L-204ENST00000431239 NUTM2BA6NNL0 878 aaPredicted RBP21.22■□□□□ 0.99
CHD1L-204ENST00000431239 NUTM2EB1AL46 878 aaPredicted RBP21.22■□□□□ 0.99
CHD1L-204ENST00000431239 TOP1P11387 765 aaKnown RBP21.22■□□□□ 0.99
CHD1L-204ENST00000431239 KLRK1P26718 216 aa21.22■□□□□ 0.99
CHD1L-204ENST00000431239 NUTM2AQ8IVF1 878 aaPredicted RBP21.22■□□□□ 0.99
CHD1L-204ENST00000431239 RGS22Q8NE09 1264 aa21.22■□□□□ 0.99
CHD1L-204ENST00000431239 GTF2E1P29083 439 aaPredicted RBP21.21■□□□□ 0.99
CHD1L-204ENST00000431239 CASP1P29466 404 aa21.21■□□□□ 0.99
CHD1L-204ENST00000431239 MDM2Q00987 491 aaPredicted RBP21.21■□□□□ 0.99
CHD1L-204ENST00000431239 NOM1Q5C9Z4 860 aaKnown RBP21.21■□□□□ 0.99
CHD1L-204ENST00000431239 INTS13Q9NVM9 706 aa21.21■□□□□ 0.99
CHD1L-204ENST00000431239 COL16A1Q07092 1604 aaPredicted RBP21.21■□□□□ 0.99
CHD1L-204ENST00000431239 BCORQ6W2J9 1755 aa21.21■□□□□ 0.99
CHD1L-204ENST00000431239 SEC23AQ15436 765 aa21.21■□□□□ 0.99
CHD1L-204ENST00000431239 TMTC2Q8N394 836 aa21.21■□□□□ 0.99
CHD1L-204ENST00000431239 LRRN4CLQ8ND94 238 aa21.21■□□□□ 0.99
CHD1L-204ENST00000431239 NFE2L3Q9Y4A8 694 aa21.21■□□□□ 0.99
CHD1L-204ENST00000431239 IFIT1BQ5T764 474 aaKnown RBP21.2■□□□□ 0.98
CHD1L-204ENST00000431239 DHX58Q96C10 678 aa21.2■□□□□ 0.98
CHD1L-204ENST00000431239 RIOK1Q9BRS2 568 aaKnown RBP21.2■□□□□ 0.98
CHD1L-204ENST00000431239 V9GY48 417 aaPredicted RBP21.2■□□□□ 0.98
CHD1L-204ENST00000431239 CICQ96RK0 1608 aaPredicted RBP21.2■□□□□ 0.98
CHD1L-204ENST00000431239 WNT7AO00755 349 aa21.2■□□□□ 0.98
CHD1L-204ENST00000431239 CBFA2T2O43439 604 aa21.2■□□□□ 0.98
CHD1L-204ENST00000431239 NMT2O60551 498 aa21.2■□□□□ 0.98
CHD1L-204ENST00000431239 CDK11BP21127 795 aaKnown RBP21.2■□□□□ 0.98
CHD1L-204ENST00000431239 FAM177A1Q8N128 213 aaPredicted RBP21.2■□□□□ 0.98
CHD1L-204ENST00000431239 SMARCE1Q969G3 411 aa21.2■□□□□ 0.98
CHD1L-204ENST00000431239 GNL3LQ9NVN8 582 aaKnown RBP21.2■□□□□ 0.98
CHD1L-204ENST00000431239 SPATA31A1Q5TZJ5 1347 aa21.19■□□□□ 0.98
CHD1L-204ENST00000431239 AFMP43652 599 aa21.19■□□□□ 0.98
CHD1L-204ENST00000431239 VSTM4Q8IW00 320 aa21.19■□□□□ 0.98
CHD1L-204ENST00000431239 ZNF384Q8TF68 577 aa21.19■□□□□ 0.98
CHD1L-204ENST00000431239 CELF1Q92879 486 aaKnown RBP21.19■□□□□ 0.98
CHD1L-204ENST00000431239 EPSTI1Q96J88 318 aa21.19■□□□□ 0.98
CHD1L-204ENST00000431239 ZSCAN10Q96SZ4 725 aaPredicted RBP21.19■□□□□ 0.98
CHD1L-204ENST00000431239 HOOK1Q9UJC3 728 aaKnown RBP21.19■□□□□ 0.98
CHD1L-204ENST00000431239 MYH6P13533 1939 aa21.19■□□□□ 0.98
CHD1L-204ENST00000431239 BCL9LQ86UU0 1499 aa21.19■□□□□ 0.98
CHD1L-204ENST00000431239 NID2Q14112 1375 aa21.19■□□□□ 0.98
CHD1L-204ENST00000431239 CAVIN4Q5BKX8 364 aa21.18■□□□□ 0.98
CHD1L-204ENST00000431239 KLHL10Q6JEL2 608 aa21.18■□□□□ 0.98
CHD1L-204ENST00000431239 SYCP1Q15431 976 aa21.18■□□□□ 0.98
CHD1L-204ENST00000431239 PKN1Q16512 942 aa21.18■□□□□ 0.98
CHD1L-204ENST00000431239 SMAP1Q8IYB5 467 aaPredicted RBP21.18■□□□□ 0.98
CHD1L-204ENST00000431239 TFCP2L1Q9NZI6 479 aa21.18■□□□□ 0.98
CHD1L-204ENST00000431239 DNAI1Q9UI46 699 aa21.18■□□□□ 0.98
CHD1L-204ENST00000431239 ZNF652Q9Y2D9 606 aa21.18■□□□□ 0.98
CHD1L-204ENST00000431239 SRPRBQ9Y5M8 271 aaKnown RBP21.18■□□□□ 0.98
CHD1L-204ENST00000431239 ZNF804BA4D1E1 1349 aa21.17■□□□□ 0.98
CHD1L-204ENST00000431239 PLCH1Q4KWH8 1693 aa21.17■□□□□ 0.98
CHD1L-204ENST00000431239 RTL9Q8NET4 1388 aa21.17■□□□□ 0.98
CHD1L-204ENST00000431239 A0A087X0B3 334 aa21.17■□□□□ 0.98
CHD1L-204ENST00000431239 USP17L12C9JPN9 530 aa21.17■□□□□ 0.98
CHD1L-204ENST00000431239 USP17L21D6R901 530 aa21.17■□□□□ 0.98
CHD1L-204ENST00000431239 SLU7O95391 586 aaKnown RBP21.17■□□□□ 0.98
CHD1L-204ENST00000431239 CATIPQ7Z7H3 387 aa21.17■□□□□ 0.98
CHD1L-204ENST00000431239 TMX1Q9H3N1 280 aa21.17■□□□□ 0.98
CHD1L-204ENST00000431239 SAMSN1Q9NSI8 373 aaKnown RBP21.17■□□□□ 0.98
CHD1L-204ENST00000431239 AATFQ9NY61 560 aaKnown RBP eCLIP21.17■□□□□ 0.98
CHD1L-204ENST00000431239 CGNQ9P2M7 1197 aaKnown RBP21.17■□□□□ 0.98
CHD1L-204ENST00000431239 MINPP1Q9UNW1 487 aa21.17■□□□□ 0.98
CHD1L-204ENST00000431239 PSDA5PKW4 1024 aaPredicted RBP21.17■□□□□ 0.98
CHD1L-204ENST00000431239 ACTN4O43707 911 aaKnown RBP21.17■□□□□ 0.98
CHD1L-204ENST00000431239 FAM47AQ5JRC9 791 aa21.17■□□□□ 0.98
CHD1L-204ENST00000431239 RNF26Q9BY78 433 aaPredicted RBP21.17■□□□□ 0.98
CHD1L-204ENST00000431239 KCND1Q9NSA2 647 aa21.17■□□□□ 0.98
CHD1L-204ENST00000431239 TRIM75PA6NK02 468 aa21.16■□□□□ 0.98
CHD1L-204ENST00000431239 STAMQ92783 540 aa21.16■□□□□ 0.98
CHD1L-204ENST00000431239 FAM84BQ96KN1 310 aaPredicted RBP21.16■□□□□ 0.98
CHD1L-204ENST00000431239 IGSF3O75054 1194 aa21.16■□□□□ 0.98
CHD1L-204ENST00000431239 ADKP55263 362 aaKnown RBP21.16■□□□□ 0.98
CHD1L-204ENST00000431239 ZNF174Q15697 407 aa21.16■□□□□ 0.98
CHD1L-204ENST00000431239 CEP131Q9UPN4 1083 aa21.16■□□□□ 0.98
CHD1L-204ENST00000431239 KIF2AO00139 706 aaPredicted RBP21.15■□□□□ 0.98
CHD1L-204ENST00000431239 KRT2P35908 639 aa21.15■□□□□ 0.98
CHD1L-204ENST00000431239 STX17P56962 302 aa21.15■□□□□ 0.98
CHD1L-204ENST00000431239 KMT5BQ4FZB7 885 aa21.15■□□□□ 0.98
CHD1L-204ENST00000431239 IQCA1Q86XH1 822 aa21.15■□□□□ 0.98
CHD1L-204ENST00000431239 SMYD4Q8IYR2 804 aaPredicted RBP21.15■□□□□ 0.98
CHD1L-204ENST00000431239 ERO1AQ96HE7 468 aa21.15■□□□□ 0.98
CHD1L-204ENST00000431239 MED15Q96RN5 788 aa21.15■□□□□ 0.98
CHD1L-204ENST00000431239 ROBO1Q9Y6N7 1651 aa21.15■□□□□ 0.98
CHD1L-204ENST00000431239 CTR9Q6PD62 1173 aa21.15■□□□□ 0.98
CHD1L-204ENST00000431239 XBP1P17861 261 aa21.15■□□□□ 0.98
CHD1L-204ENST00000431239 FBXO38Q6PIJ6 1188 aa21.15■□□□□ 0.98
CHD1L-204ENST00000431239 LINC00116Q8NCU8 138 aa21.15■□□□□ 0.98
CHD1L-204ENST00000431239 COBLO75128 1261 aa21.14■□□□□ 0.97
CHD1L-204ENST00000431239 CYP2D6P10635 497 aa21.14■□□□□ 0.97
CHD1L-204ENST00000431239 MORC3Q14149 939 aa21.14■□□□□ 0.97
CHD1L-204ENST00000431239 ERCC6LQ2NKX8 1250 aa21.14■□□□□ 0.97
CHD1L-204ENST00000431239 SYMPKQ92797 1274 aaKnown RBP21.14■□□□□ 0.97
CHD1L-204ENST00000431239 ANAPC4Q9UJX5 808 aa21.14■□□□□ 0.97
CHD1L-204ENST00000431239 WNK3Q9BYP7 1800 aa21.14■□□□□ 0.97
CHD1L-204ENST00000431239 ZSCAN20P17040 1043 aaPredicted RBP21.14■□□□□ 0.97
CHD1L-204ENST00000431239 FUT2Q10981 343 aa21.14■□□□□ 0.97
CHD1L-204ENST00000431239 UBE4AQ14139 1066 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms