RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 FANCD2OSQ96PS1 177 aa4.86□□□□□ -1.63
HMGB1P9-201ENST00000429856 NOC4LQ9BVI4 516 aaKnown RBP4.86□□□□□ -1.63
HMGB1P9-201ENST00000429856 DUSP23Q9BVJ7 150 aa4.86□□□□□ -1.63
HMGB1P9-201ENST00000429856 TNKS2Q9H2K2 1166 aa4.86□□□□□ -1.63
HMGB1P9-201ENST00000429856 SSU72Q9NP77 194 aaKnown RBP4.86□□□□□ -1.63
HMGB1P9-201ENST00000429856 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 E9PSI1 815 aa4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 TMPRSS2O15393 492 aa4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 FBXO24O75426 580 aa4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 LEFTY1O75610 366 aa4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 ITIH2P19823 946 aa4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 CCDC85BQ15834 202 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 CIAPIN1Q6FI81 312 aa4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 CYFIP1Q7L576 1253 aa4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 PDZD3Q86UT5 571 aa4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 KCNB2Q92953 911 aa4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 KIRREL1Q96J84 757 aa4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 CBX8Q9HC52 389 aa4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 GTF2IRD1Q9UHL9 959 aa4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 CYP8B1Q9UNU6 501 aa4.85□□□□□ -1.63
HMGB1P9-201ENST00000429856 USP31Q70CQ4 1352 aa4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 NPIPB6E9PJ23 425 aa4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 TRIM37O94972 964 aa4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 CELA3AP09093 270 aa4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 INHBBP09529 407 aa4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 LIG1P18858 919 aa4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 LMNB1P20700 586 aa4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 RPS26P62854 115 aaKnown RBP4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 ZNF252P-AS1Q0IIN9 211 aa4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 MRPL58Q14197 206 aaKnown RBP4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 KIF4BQ2VIQ3 1234 aa4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 MEI1Q5TIA1 1274 aa4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 FYB2Q5VWT5 728 aa4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 LLGL2Q6P1M3 1020 aa4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 CCDC86Q9H6F5 360 aaKnown RBP4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 DISC1Q9NRI5 854 aa4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 U3KQE9 123 aa4.84□□□□□ -1.63
HMGB1P9-201ENST00000429856 PAGE1O75459 146 aa4.83□□□□□ -1.64
HMGB1P9-201ENST00000429856 CTSHP09668 335 aa4.83□□□□□ -1.64
HMGB1P9-201ENST00000429856 BMP6P22004 513 aa4.83□□□□□ -1.64
HMGB1P9-201ENST00000429856 PCNX4Q63HM2 1172 aa4.83□□□□□ -1.64
HMGB1P9-201ENST00000429856 MAP1SQ66K74 1059 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P9-201ENST00000429856 DIEXFQ68CQ4 756 aaKnown RBP4.83□□□□□ -1.64
HMGB1P9-201ENST00000429856 TTBK2Q6IQ55 1244 aa4.83□□□□□ -1.64
HMGB1P9-201ENST00000429856 ZC3H12CQ9C0D7 883 aaKnown RBP4.83□□□□□ -1.64
HMGB1P9-201ENST00000429856 IGF2BP3O00425 579 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 ZNF862O60290 1169 aa4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 KRT1P04264 644 aa4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 LIG3P49916 1009 aa4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 PWP1Q13610 501 aa4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 TTLL4Q14679 1199 aa4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 KCNA10Q16322 511 aa4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 TOP6BLQ8N6T0 577 aa4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 STK35Q8TDR2 534 aa4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 RELTQ969Z4 430 aa4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 WDR89Q96FK6 387 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 ACSBG1Q96GR2 724 aa4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 DIRC2Q96SL1 478 aa4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 NSUN3Q9H649 340 aaKnown RBP4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 CACNA2D2Q9NY47 1150 aa4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 KIAA1522Q9P206 1035 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P9-201ENST00000429856 TCAF2A6NFQ2 919 aa4.81□□□□□ -1.64
HMGB1P9-201ENST00000429856 HCLS1P14317 486 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P9-201ENST00000429856 VAMP1P23763 118 aa4.81□□□□□ -1.64
HMGB1P9-201ENST00000429856 AGMOQ6ZNB7 445 aa4.81□□□□□ -1.64
HMGB1P9-201ENST00000429856 ATG14Q6ZNE5 492 aa4.81□□□□□ -1.64
HMGB1P9-201ENST00000429856 DBX2Q6ZNG2 339 aa4.81□□□□□ -1.64
HMGB1P9-201ENST00000429856 GPBAR1Q8TDU6 330 aa4.81□□□□□ -1.64
HMGB1P9-201ENST00000429856 CCDC120Q96HB5 630 aa4.81□□□□□ -1.64
HMGB1P9-201ENST00000429856 HEXIM2Q96MH2 286 aaKnown RBP4.81□□□□□ -1.64
HMGB1P9-201ENST00000429856 IGSF5Q9NSI5 407 aa4.81□□□□□ -1.64
HMGB1P9-201ENST00000429856 GNAT3A8MTJ3 354 aa4.8□□□□□ -1.64
HMGB1P9-201ENST00000429856 GDNFP39905 211 aa4.8□□□□□ -1.64
HMGB1P9-201ENST00000429856 ERVK-24P63145 666 aa4.8□□□□□ -1.64
HMGB1P9-201ENST00000429856 RELL1Q8IUW5 271 aa4.8□□□□□ -1.64
HMGB1P9-201ENST00000429856 GRIN3AQ8TCU5 1115 aa4.8□□□□□ -1.64
HMGB1P9-201ENST00000429856 KCNN1Q92952 543 aa4.8□□□□□ -1.64
HMGB1P9-201ENST00000429856 RSRP1Q9BUV0 290 aa4.8□□□□□ -1.64
HMGB1P9-201ENST00000429856 DCP1AQ9NPI6 582 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P9-201ENST00000429856 JAG2Q9Y219 1238 aa4.8□□□□□ -1.64
HMGB1P9-201ENST00000429856 PCDHGC5Q9Y5F6 944 aa4.8□□□□□ -1.64
HMGB1P9-201ENST00000429856 HOXA5P20719 270 aa4.79□□□□□ -1.64
HMGB1P9-201ENST00000429856 CLCN7P51798 805 aa4.79□□□□□ -1.64
HMGB1P9-201ENST00000429856 MAP3K11Q16584 847 aa4.79□□□□□ -1.64
HMGB1P9-201ENST00000429856 ZC3H12AQ5D1E8 599 aaKnown RBP4.79□□□□□ -1.64
HMGB1P9-201ENST00000429856 SPACA3Q8IXA5 215 aa4.79□□□□□ -1.64
HMGB1P9-201ENST00000429856 MIR1-1HGQ9H1L0 117 aa4.79□□□□□ -1.64
HMGB1P9-201ENST00000429856 CD320Q9NPF0 282 aa4.79□□□□□ -1.64
HMGB1P9-201ENST00000429856 METTL5Q9NRN9 209 aaKnown RBP4.79□□□□□ -1.64
HMGB1P9-201ENST00000429856 PCDHA4Q9UN74 947 aa4.79□□□□□ -1.64
HMGB1P9-201ENST00000429856 SMG5Q9UPR3 1016 aaKnown RBP4.79□□□□□ -1.64
HMGB1P9-201ENST00000429856 NUAK1O60285 661 aa4.78□□□□□ -1.64
HMGB1P9-201ENST00000429856 MED14OSP0DP75 135 aa4.78□□□□□ -1.64
HMGB1P9-201ENST00000429856 RASIP1Q5U651 963 aa4.78□□□□□ -1.64
HMGB1P9-201ENST00000429856 FAM214BQ7L5A3 538 aa4.78□□□□□ -1.64
HMGB1P9-201ENST00000429856 HS2ST1Q7LGA3 356 aa4.78□□□□□ -1.64
HMGB1P9-201ENST00000429856 CCDC84Q86UT8 332 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P9-201ENST00000429856 TMEM87AQ8NBN3 555 aa4.78□□□□□ -1.64
HMGB1P9-201ENST00000429856 RNF214Q8ND24 703 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms