RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 FMNL1O95466 1100 aaPredicted RBP16.79■□□□□ 0.28
CDK3-201ENST00000425876 PLCD1P51178 756 aa16.79■□□□□ 0.28
CDK3-201ENST00000425876 SSRP1Q08945 709 aaKnown RBP16.79■□□□□ 0.28
CDK3-201ENST00000425876 DGKHQ86XP1 1220 aa16.79■□□□□ 0.28
CDK3-201ENST00000425876 WASF1Q92558 559 aa16.79■□□□□ 0.28
CDK3-201ENST00000425876 MXD3Q9BW11 206 aa16.79■□□□□ 0.28
CDK3-201ENST00000425876 MKNK2Q9HBH9 465 aa16.79■□□□□ 0.28
CDK3-201ENST00000425876 PPIP5K2O43314 1243 aa16.78■□□□□ 0.28
CDK3-201ENST00000425876 FIBPO43427 364 aa16.78■□□□□ 0.28
CDK3-201ENST00000425876 CRKP46108 304 aa16.78■□□□□ 0.28
CDK3-201ENST00000425876 TROAPQ12815 778 aa16.78■□□□□ 0.28
CDK3-201ENST00000425876 APOBEC3HQ6NTF7 200 aaKnown RBP16.78■□□□□ 0.28
CDK3-201ENST00000425876 KCNQ5Q9NR82 932 aa16.78■□□□□ 0.28
CDK3-201ENST00000425876 RBM28Q9NW13 759 aaKnown RBP16.78■□□□□ 0.28
CDK3-201ENST00000425876 SAP30BPQ9UHR5 308 aaKnown RBP16.78■□□□□ 0.28
CDK3-201ENST00000425876 CFAP45Q9UL16 551 aa16.78■□□□□ 0.28
CDK3-201ENST00000425876 CD2APQ9Y5K6 639 aa16.78■□□□□ 0.28
CDK3-201ENST00000425876 SCN9AQ15858 1988 aa16.78■□□□□ 0.28
CDK3-201ENST00000425876 ZNF646O15015 1829 aaPredicted RBP16.78■□□□□ 0.28
CDK3-201ENST00000425876 WDHD1O75717 1129 aaPredicted RBP16.77■□□□□ 0.28
CDK3-201ENST00000425876 TFAP4Q01664 338 aa16.77■□□□□ 0.28
CDK3-201ENST00000425876 FAM47AQ5JRC9 791 aa16.77■□□□□ 0.28
CDK3-201ENST00000425876 TTC6Q86TZ1 520 aa16.77■□□□□ 0.28
CDK3-201ENST00000425876 CCDC144CPQ8IYA2 1237 aa16.77■□□□□ 0.28
CDK3-201ENST00000425876 TRIM22Q8IYM9 498 aa16.77■□□□□ 0.28
CDK3-201ENST00000425876 ZNF444Q8N0Y2 327 aaPredicted RBP16.77■□□□□ 0.28
CDK3-201ENST00000425876 DYNLL2Q96FJ2 89 aa16.77■□□□□ 0.28
CDK3-201ENST00000425876 MAP3K14Q99558 947 aa16.77■□□□□ 0.28
CDK3-201ENST00000425876 ALG1Q9BT22 464 aa16.77■□□□□ 0.28
CDK3-201ENST00000425876 USP40Q9NVE5 1235 aa16.77■□□□□ 0.28
CDK3-201ENST00000425876 PIM2Q9P1W9 311 aa16.77■□□□□ 0.28
CDK3-201ENST00000425876 SERPINA10Q9UK55 444 aa16.77■□□□□ 0.28
CDK3-201ENST00000425876 NPM3O75607 178 aaKnown RBP16.77■□□□□ 0.27
CDK3-201ENST00000425876 RASA1P20936 1047 aa16.77■□□□□ 0.27
CDK3-201ENST00000425876 CDK8P49336 464 aa16.77■□□□□ 0.27
CDK3-201ENST00000425876 SCNN1DP51172 638 aa16.77■□□□□ 0.27
CDK3-201ENST00000425876 RCSD1Q6JBY9 416 aa16.77■□□□□ 0.27
CDK3-201ENST00000425876 CDC42EP5Q6NZY7 148 aa16.77■□□□□ 0.27
CDK3-201ENST00000425876 BRAPQ7Z569 592 aa16.77■□□□□ 0.27
CDK3-201ENST00000425876 NBPF11Q86T75 865 aa16.77■□□□□ 0.27
CDK3-201ENST00000425876 CRACR2BQ8N4Y2 399 aaPredicted RBP16.77■□□□□ 0.27
CDK3-201ENST00000425876 NUP133Q8WUM0 1156 aa16.77■□□□□ 0.27
CDK3-201ENST00000425876 PHKBQ93100 1093 aa16.77■□□□□ 0.27
CDK3-201ENST00000425876 TAOK2Q9UL54 1235 aa16.77■□□□□ 0.27
CDK3-201ENST00000425876 PPFIA3O75145 1194 aa16.76■□□□□ 0.27
CDK3-201ENST00000425876 GADD45BO75293 160 aaPredicted RBP16.76■□□□□ 0.27
CDK3-201ENST00000425876 CAVIN1Q6NZI2 390 aaKnown RBP16.76■□□□□ 0.27
CDK3-201ENST00000425876 FAM173BQ6P4H8 233 aa16.76■□□□□ 0.27
CDK3-201ENST00000425876 ZNF396Q96N95 335 aaPredicted RBP16.76■□□□□ 0.27
CDK3-201ENST00000425876 SLC26A6Q9BXS9 759 aa16.76■□□□□ 0.27
CDK3-201ENST00000425876 RNF26Q9BY78 433 aaPredicted RBP16.76■□□□□ 0.27
CDK3-201ENST00000425876 MYO3BQ8WXR4 1341 aa16.76■□□□□ 0.27
CDK3-201ENST00000425876 MYH1P12882 1939 aa16.76■□□□□ 0.27
CDK3-201ENST00000425876 FSD2A1L4K1 749 aa16.75■□□□□ 0.27
CDK3-201ENST00000425876 YDJCA8MPS7 323 aa16.75■□□□□ 0.27
CDK3-201ENST00000425876 DEXIO95424 95 aa16.75■□□□□ 0.27
CDK3-201ENST00000425876 TSPY3P0CV98 308 aa16.75■□□□□ 0.27
CDK3-201ENST00000425876 TSPY8P0CW00 308 aa16.75■□□□□ 0.27
CDK3-201ENST00000425876 GUCY1B3Q02153 619 aa16.75■□□□□ 0.27
CDK3-201ENST00000425876 KIAA0825Q8IV33 1275 aa16.75■□□□□ 0.27
CDK3-201ENST00000425876 NEDD1Q8NHV4 660 aa16.75■□□□□ 0.27
CDK3-201ENST00000425876 SYAP1Q96A49 352 aaPredicted RBP16.75■□□□□ 0.27
CDK3-201ENST00000425876 IL17RBQ9NRM6 502 aa16.75■□□□□ 0.27
CDK3-201ENST00000425876 NMT2O60551 498 aa16.74■□□□□ 0.27
CDK3-201ENST00000425876 FOSBP53539 338 aa16.74■□□□□ 0.27
CDK3-201ENST00000425876 ZNF445P59923 1031 aa16.74■□□□□ 0.27
CDK3-201ENST00000425876 GABPAQ06546 454 aa16.74■□□□□ 0.27
CDK3-201ENST00000425876 SLC4A8Q2Y0W8 1093 aa16.74■□□□□ 0.27
CDK3-201ENST00000425876 LEO1Q8WVC0 666 aaPredicted RBP16.74■□□□□ 0.27
CDK3-201ENST00000425876 SPATA32Q96LK8 384 aa16.74■□□□□ 0.27
CDK3-201ENST00000425876 OSBPL5Q9H0X9 879 aaPredicted RBP16.74■□□□□ 0.27
CDK3-201ENST00000425876 DDX4Q9NQI0 724 aaKnown RBP16.74■□□□□ 0.27
CDK3-201ENST00000425876 PSME4Q14997 1843 aa16.74■□□□□ 0.27
CDK3-201ENST00000425876 BRCA1P38398 1863 aaKnown RBP16.73■□□□□ 0.27
CDK3-201ENST00000425876 KIF23Q02241 960 aaPredicted RBP16.73■□□□□ 0.27
CDK3-201ENST00000425876 FUT2Q10981 343 aa16.73■□□□□ 0.27
CDK3-201ENST00000425876 TRIM29Q14134 588 aa16.73■□□□□ 0.27
CDK3-201ENST00000425876 KRT40Q6A162 431 aa16.73■□□□□ 0.27
CDK3-201ENST00000425876 SLC44A5Q8NCS7 719 aa16.73■□□□□ 0.27
CDK3-201ENST00000425876 CTCFLQ8NI51 663 aaPredicted RBP16.73■□□□□ 0.27
CDK3-201ENST00000425876 IDI2Q9BXS1 227 aa16.73■□□□□ 0.27
CDK3-201ENST00000425876 KAT14Q9H8E8 782 aa16.73■□□□□ 0.27
CDK3-201ENST00000425876 TFIP11Q9UBB9 837 aaKnown RBP16.73■□□□□ 0.27
CDK3-201ENST00000425876 SWAP70Q9UH65 585 aa16.73■□□□□ 0.27
CDK3-201ENST00000425876 PRPF3O43395 683 aaKnown RBP16.72■□□□□ 0.27
CDK3-201ENST00000425876 VIL1P09327 827 aaKnown RBP16.72■□□□□ 0.27
CDK3-201ENST00000425876 KIF5BP33176 963 aa16.72■□□□□ 0.27
CDK3-201ENST00000425876 NOVP48745 357 aa16.72■□□□□ 0.27
CDK3-201ENST00000425876 PICALMQ13492 652 aa16.72■□□□□ 0.27
CDK3-201ENST00000425876 ZSCAN23Q3MJ62 389 aa16.72■□□□□ 0.27
CDK3-201ENST00000425876 DALRD3Q5D0E6 543 aaKnown RBP16.72■□□□□ 0.27
CDK3-201ENST00000425876 OTUD7BQ6GQQ9 843 aa16.72■□□□□ 0.27
CDK3-201ENST00000425876 TMTC3Q6ZXV5 915 aa16.72■□□□□ 0.27
CDK3-201ENST00000425876 LARGE2Q8N3Y3 721 aa16.72■□□□□ 0.27
CDK3-201ENST00000425876 EHD4Q9H223 541 aa16.72■□□□□ 0.27
CDK3-201ENST00000425876 TMEM63CQ9P1W3 806 aa16.72■□□□□ 0.27
CDK3-201ENST00000425876 RCOR1Q9UKL0 485 aa16.72■□□□□ 0.27
CDK3-201ENST00000425876 PLIN4Q96Q06 1357 aa16.72■□□□□ 0.27
CDK3-201ENST00000425876 GOLGA6L3A6NEY3 463 aa16.72■□□□□ 0.27
CDK3-201ENST00000425876 DCAF8L1A6NGE4 600 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms