RNA–Protein interactions for RNA: ENST00000422026.1

SSX2IP-202, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-202ENST00000422026 PDIA3P30101 505 aaKnown RBP16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 NUCB2P80303 420 aa16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 TFAP4Q01664 338 aa16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 TCP10Q12799 353 aa16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 PPP2R5BQ15173 497 aa16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 KIF4BQ2VIQ3 1234 aa16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 SLC4A8Q2Y0W8 1093 aa16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 IFIT1BQ5T764 474 aaKnown RBP16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 C9orf131Q5VYM1 1079 aa16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 DPY19L2Q6NUT2 758 aa16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 CPLX2Q6PUV4 134 aaKnown RBP16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 DGKHQ86XP1 1220 aa16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 LARP6Q9BRS8 491 aaKnown RBP16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 GPRC5DQ9NZD1 345 aa16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 HERC5Q9UII4 1024 aaKnown RBP16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 NAP1L2Q9ULW6 460 aaPredicted RBP16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 NID2Q14112 1375 aa16.87■□□□□ 0.29
SSX2IP-202ENST00000422026 CLRN2A0PK11 232 aa16.86■□□□□ 0.29
SSX2IP-202ENST00000422026 ZBTB43O43298 467 aa16.86■□□□□ 0.29
SSX2IP-202ENST00000422026 RASA1P20936 1047 aa16.86■□□□□ 0.29
SSX2IP-202ENST00000422026 DDIT3P35638 169 aa16.86■□□□□ 0.29
SSX2IP-202ENST00000422026 CACNB3P54284 484 aa16.86■□□□□ 0.29
SSX2IP-202ENST00000422026 HMGN5P82970 282 aaKnown RBP16.86■□□□□ 0.29
SSX2IP-202ENST00000422026 SEC23AQ15436 765 aa16.86■□□□□ 0.29
SSX2IP-202ENST00000422026 APOA5Q6Q788 366 aa16.86■□□□□ 0.29
SSX2IP-202ENST00000422026 METTL16Q86W50 562 aaKnown RBP16.86■□□□□ 0.29
SSX2IP-202ENST00000422026 NEDD1Q8NHV4 660 aa16.86■□□□□ 0.29
SSX2IP-202ENST00000422026 VEZTQ9HBM0 779 aa16.86■□□□□ 0.29
SSX2IP-202ENST00000422026 CCDC196A0A1B0GTZ2 297 aa16.85■□□□□ 0.29
SSX2IP-202ENST00000422026 SMIM22K7EJ46 135 aa16.85■□□□□ 0.29
SSX2IP-202ENST00000422026 CDKL5O76039 1030 aa16.85■□□□□ 0.29
SSX2IP-202ENST00000422026 DDAH1O94760 285 aa16.85■□□□□ 0.29
SSX2IP-202ENST00000422026 METAP2P50579 478 aaKnown RBP eCLIP16.85■□□□□ 0.29
SSX2IP-202ENST00000422026 SCRN1Q12765 414 aa16.85■□□□□ 0.29
SSX2IP-202ENST00000422026 STK3Q13188 491 aa16.85■□□□□ 0.29
SSX2IP-202ENST00000422026 CATIPQ7Z7H3 387 aa16.85■□□□□ 0.29
SSX2IP-202ENST00000422026 ENAHQ8N8S7 591 aaPredicted RBP16.85■□□□□ 0.29
SSX2IP-202ENST00000422026 ANKS1AQ92625 1134 aa16.85■□□□□ 0.29
SSX2IP-202ENST00000422026 FOXD4L1Q9NU39 408 aa16.85■□□□□ 0.29
SSX2IP-202ENST00000422026 DDTLA6NHG4 134 aaPredicted RBP16.84■□□□□ 0.29
SSX2IP-202ENST00000422026 TCP10L2B9ZVM9 353 aa16.84■□□□□ 0.29
SSX2IP-202ENST00000422026 CPLX1O14810 134 aa16.84■□□□□ 0.29
SSX2IP-202ENST00000422026 PDCP20941 246 aa16.84■□□□□ 0.29
SSX2IP-202ENST00000422026 EVX2Q03828 476 aa16.84■□□□□ 0.29
SSX2IP-202ENST00000422026 NBPF9Q3BBW0 867 aa16.84■□□□□ 0.29
SSX2IP-202ENST00000422026 FAM47AQ5JRC9 791 aa16.84■□□□□ 0.29
SSX2IP-202ENST00000422026 APOBEC3FQ8IUX4 373 aaKnown RBP16.84■□□□□ 0.29
SSX2IP-202ENST00000422026 NECAB1Q8N987 351 aa16.84■□□□□ 0.29
SSX2IP-202ENST00000422026 SLC44A5Q8NCS7 719 aa16.84■□□□□ 0.29
SSX2IP-202ENST00000422026 CSRNP1Q96S65 589 aa16.84■□□□□ 0.29
SSX2IP-202ENST00000422026 ZKSCAN3Q9BRR0 538 aa16.84■□□□□ 0.29
SSX2IP-202ENST00000422026 GPHNQ9NQX3 736 aaPredicted RBP16.84■□□□□ 0.29
SSX2IP-202ENST00000422026 BRPF3Q9ULD4 1205 aa16.84■□□□□ 0.29
SSX2IP-202ENST00000422026 GOLGA8AA7E2F4 631 aa16.83■□□□□ 0.28
SSX2IP-202ENST00000422026 CNTNAP1P78357 1384 aa16.83■□□□□ 0.28
SSX2IP-202ENST00000422026 ZNF654Q8IZM8 581 aa16.83■□□□□ 0.28
SSX2IP-202ENST00000422026 HOOK2Q96ED9 719 aa16.83■□□□□ 0.28
SSX2IP-202ENST00000422026 MYH8P13535 1937 aa16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 TBC1D12O60347 775 aa16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 SHMT1P34896 483 aa16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 ST3GAL1Q11201 340 aa16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 TBC1D10BQ4KMP7 808 aaPredicted RBP16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 RBM26Q5T8P6 1007 aaKnown RBP16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 TATDN1Q6P1N9 297 aa16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 SH3BP5LQ7L8J4 393 aa16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 SAMD7Q7Z3H4 446 aa16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 MICU3Q86XE3 530 aa16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 ZFPM1Q8IX07 1006 aa16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 NKX2-3Q8TAU0 364 aa16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 MAP3K14Q99558 947 aa16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 KAT14Q9H8E8 782 aa16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 ADARB2Q9NS39 739 aaKnown RBP16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 RBM28Q9NW13 759 aaKnown RBP16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 HPS5Q9UPZ3 1129 aa16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 PPP2R3BQ9Y5P8 575 aa16.82■□□□□ 0.28
SSX2IP-202ENST00000422026 PITPNM2Q9BZ72 1349 aa16.81■□□□□ 0.28
SSX2IP-202ENST00000422026 SHTN1A0MZ66 631 aa16.81■□□□□ 0.28
SSX2IP-202ENST00000422026 GJB2P29033 226 aa16.81■□□□□ 0.28
SSX2IP-202ENST00000422026 CCT2P78371 535 aaKnown RBP16.81■□□□□ 0.28
SSX2IP-202ENST00000422026 RTN1Q16799 776 aa16.81■□□□□ 0.28
SSX2IP-202ENST00000422026 SMARCC2Q8TAQ2 1214 aa16.81■□□□□ 0.28
SSX2IP-202ENST00000422026 L3MBTL3Q96JM7 780 aaPredicted RBP16.81■□□□□ 0.28
SSX2IP-202ENST00000422026 SIPA1L1O43166 1804 aa16.81■□□□□ 0.28
SSX2IP-202ENST00000422026 DDNO94850 711 aaPredicted RBP16.8■□□□□ 0.28
SSX2IP-202ENST00000422026 TOP1P11387 765 aaKnown RBP16.8■□□□□ 0.28
SSX2IP-202ENST00000422026 KIF5BP33176 963 aa16.8■□□□□ 0.28
SSX2IP-202ENST00000422026 NOVP48745 357 aa16.8■□□□□ 0.28
SSX2IP-202ENST00000422026 CERKLQ49MI3 558 aaPredicted RBP16.8■□□□□ 0.28
SSX2IP-202ENST00000422026 TMEM179Q6ZVK1 233 aa16.8■□□□□ 0.28
SSX2IP-202ENST00000422026 FAM184AQ8NB25 1140 aa16.8■□□□□ 0.28
SSX2IP-202ENST00000422026 RGS22Q8NE09 1264 aa16.8■□□□□ 0.28
SSX2IP-202ENST00000422026 NSUN7Q8NE18 718 aaKnown RBP16.8■□□□□ 0.28
SSX2IP-202ENST00000422026 CTCFLQ8NI51 663 aaPredicted RBP16.8■□□□□ 0.28
SSX2IP-202ENST00000422026 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.8■□□□□ 0.28
SSX2IP-202ENST00000422026 IL17RBQ9NRM6 502 aa16.8■□□□□ 0.28
SSX2IP-202ENST00000422026 HACL1Q9UJ83 578 aa16.8■□□□□ 0.28
SSX2IP-202ENST00000422026 WDR33Q9C0J8 1336 aaKnown RBP16.79■□□□□ 0.28
SSX2IP-202ENST00000422026 IGKV6D-41A0A0C4DH26 115 aa16.79■□□□□ 0.28
SSX2IP-202ENST00000422026 PTPDC1A2A3K4 754 aa16.79■□□□□ 0.28
SSX2IP-202ENST00000422026 DCAF8L1A6NGE4 600 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms