RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 JAG1P78504 1218 aa20.67■□□□□ 0.9
UPF3AP3-201ENST00000420996 CRACR2BQ8N4Y2 399 aaPredicted RBP20.67■□□□□ 0.9
UPF3AP3-201ENST00000420996 SSH3Q8TE77 659 aa20.67■□□□□ 0.9
UPF3AP3-201ENST00000420996 ZNF512BQ96KM6 892 aaPredicted RBP20.67■□□□□ 0.9
UPF3AP3-201ENST00000420996 P2RX7Q99572 595 aaKnown RBP20.67■□□□□ 0.9
UPF3AP3-201ENST00000420996 DNAJC18Q9H819 358 aa20.67■□□□□ 0.9
UPF3AP3-201ENST00000420996 STAP2Q9UGK3 403 aa20.67■□□□□ 0.9
UPF3AP3-201ENST00000420996 SZT2Q5T011 3432 aa20.66■□□□□ 0.9
UPF3AP3-201ENST00000420996 USP17L10C9JJH3 530 aa20.66■□□□□ 0.9
UPF3AP3-201ENST00000420996 HERVK_113P62684 666 aa20.66■□□□□ 0.9
UPF3AP3-201ENST00000420996 TRIM32Q13049 653 aa20.66■□□□□ 0.9
UPF3AP3-201ENST00000420996 ADGRA1Q86SQ6 560 aa20.66■□□□□ 0.9
UPF3AP3-201ENST00000420996 TMEM57Q8N5G2 664 aa20.66■□□□□ 0.9
UPF3AP3-201ENST00000420996 GPRC5AQ8NFJ5 357 aa20.66■□□□□ 0.9
UPF3AP3-201ENST00000420996 TRIM34Q9BYJ4 488 aa20.66■□□□□ 0.9
UPF3AP3-201ENST00000420996 PALD1Q9ULE6 856 aa20.66■□□□□ 0.9
UPF3AP3-201ENST00000420996 ATP8B2P98198 1209 aa20.65■□□□□ 0.9
UPF3AP3-201ENST00000420996 OS9Q13438 667 aaPredicted RBP20.65■□□□□ 0.9
UPF3AP3-201ENST00000420996 TRIB2Q92519 343 aa20.65■□□□□ 0.9
UPF3AP3-201ENST00000420996 NUDT12Q9BQG2 462 aa20.65■□□□□ 0.9
UPF3AP3-201ENST00000420996 NBPF3Q9H094 633 aa20.65■□□□□ 0.9
UPF3AP3-201ENST00000420996 TXNRD2Q9NNW7 524 aa20.65■□□□□ 0.9
UPF3AP3-201ENST00000420996 XRCC5P13010 732 aaKnown RBP20.64■□□□□ 0.89
UPF3AP3-201ENST00000420996 CYP2B6P20813 491 aa20.64■□□□□ 0.89
UPF3AP3-201ENST00000420996 ZAP70P43403 619 aa20.64■□□□□ 0.89
UPF3AP3-201ENST00000420996 MAP3K21Q5TCX8 1036 aa20.64■□□□□ 0.89
UPF3AP3-201ENST00000420996 ZBTB21Q9ULJ3 1066 aa20.64■□□□□ 0.89
UPF3AP3-201ENST00000420996 DDX60LQ5H9U9 1706 aaKnown RBP20.64■□□□□ 0.89
UPF3AP3-201ENST00000420996 SURF6O75683 361 aaKnown RBP20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 GDF11O95390 407 aa20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 HLA-DOAP06340 250 aa20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 MAPK4P31152 587 aa20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 BMP8BP34820 402 aa20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 MNX1P50219 401 aaPredicted RBP20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 SHROOM1Q2M3G4 852 aaPredicted RBP20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 ZKSCAN2Q63HK3 967 aa20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 TRMT44Q8IYL2 757 aaKnown RBP20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 GTF3C2Q8WUA4 911 aaPredicted RBP20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 SOCS4Q8WXH5 440 aa20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 GDF15Q99988 308 aa20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 PIH1D3Q9NQM4 214 aaKnown RBP20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 RBPJLQ9UBG7 517 aa20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 OGDHLQ9ULD0 1010 aa20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 MYH1P12882 1939 aa20.63■□□□□ 0.89
UPF3AP3-201ENST00000420996 SOX1O00570 391 aaPredicted RBP20.62■□□□□ 0.89
UPF3AP3-201ENST00000420996 PEX10O60683 326 aa20.62■□□□□ 0.89
UPF3AP3-201ENST00000420996 C7orf61Q8IZ16 206 aa20.62■□□□□ 0.89
UPF3AP3-201ENST00000420996 SAP30BPQ9UHR5 308 aaKnown RBP20.62■□□□□ 0.89
UPF3AP3-201ENST00000420996 NOP58Q9Y2X3 529 aaKnown RBP20.62■□□□□ 0.89
UPF3AP3-201ENST00000420996 PRKAR2AP13861 404 aaKnown RBP20.61■□□□□ 0.89
UPF3AP3-201ENST00000420996 CYP7A1P22680 504 aa20.61■□□□□ 0.89
UPF3AP3-201ENST00000420996 ERVK-9P63128 1117 aa20.61■□□□□ 0.89
UPF3AP3-201ENST00000420996 ERVK-24P63145 666 aa20.61■□□□□ 0.89
UPF3AP3-201ENST00000420996 DYNLL1P63167 89 aaKnown RBP20.61■□□□□ 0.89
UPF3AP3-201ENST00000420996 PDE3AQ14432 1141 aa20.61■□□□□ 0.89
UPF3AP3-201ENST00000420996 Q3C1V9 767 aa20.61■□□□□ 0.89
UPF3AP3-201ENST00000420996 USP17L2Q6R6M4 530 aa20.61■□□□□ 0.89
UPF3AP3-201ENST00000420996 CCAR1Q8IX12 1150 aaKnown RBP20.61■□□□□ 0.89
UPF3AP3-201ENST00000420996 C11orf49Q9H6J7 331 aa20.61■□□□□ 0.89
UPF3AP3-201ENST00000420996 EMILIN3Q9NT22 766 aa20.61■□□□□ 0.89
UPF3AP3-201ENST00000420996 DBNLQ9UJU6 430 aaKnown RBP20.61■□□□□ 0.89
UPF3AP3-201ENST00000420996 CERS3Q8IU89 383 aa20.6■□□□□ 0.89
UPF3AP3-201ENST00000420996 USP6NLQ92738 828 aa20.6■□□□□ 0.89
UPF3AP3-201ENST00000420996 ZMYND8Q9ULU4 1186 aaPredicted RBP20.6■□□□□ 0.89
UPF3AP3-201ENST00000420996 ZKSCAN1P17029 563 aaPredicted RBP20.59■□□□□ 0.89
UPF3AP3-201ENST00000420996 GPR142Q7Z601 462 aa20.59■□□□□ 0.89
UPF3AP3-201ENST00000420996 PLEKHH3Q7Z736 793 aa20.59■□□□□ 0.89
UPF3AP3-201ENST00000420996 LRCH3Q96II8 777 aa20.59■□□□□ 0.89
UPF3AP3-201ENST00000420996 PORCNQ9H237 461 aa20.59■□□□□ 0.89
UPF3AP3-201ENST00000420996 IDH1O75874 414 aaKnown RBP20.58■□□□□ 0.89
UPF3AP3-201ENST00000420996 GH2P01242 217 aa20.58■□□□□ 0.89
UPF3AP3-201ENST00000420996 RGS2P41220 211 aa20.58■□□□□ 0.89
UPF3AP3-201ENST00000420996 CACNB2Q08289 660 aaPredicted RBP20.58■□□□□ 0.89
UPF3AP3-201ENST00000420996 MORN1Q5T089 497 aa20.58■□□□□ 0.89
UPF3AP3-201ENST00000420996 TATDN1Q6P1N9 297 aa20.58■□□□□ 0.89
UPF3AP3-201ENST00000420996 POTEEQ6S8J3 1075 aa20.58■□□□□ 0.89
UPF3AP3-201ENST00000420996 C12orf42Q96LP6 360 aa20.58■□□□□ 0.89
UPF3AP3-201ENST00000420996 PAGR1Q9BTK6 254 aa20.58■□□□□ 0.89
UPF3AP3-201ENST00000420996 CCDC8Q9H0W5 538 aaPredicted RBP20.58■□□□□ 0.89
UPF3AP3-201ENST00000420996 C1orf115Q9H7X2 142 aa20.58■□□□□ 0.89
UPF3AP3-201ENST00000420996 TLR7Q9NYK1 1049 aaKnown RBP20.58■□□□□ 0.89
UPF3AP3-201ENST00000420996 USP5P45974 858 aa20.57■□□□□ 0.88
UPF3AP3-201ENST00000420996 MIGA1Q8NAN2 632 aa20.57■□□□□ 0.88
UPF3AP3-201ENST00000420996 EAF2Q96CJ1 260 aaPredicted RBP20.57■□□□□ 0.88
UPF3AP3-201ENST00000420996 SERPINB13Q9UIV8 391 aa20.57■□□□□ 0.88
UPF3AP3-201ENST00000420996 RABGAP1Q9Y3P9 1069 aa20.57■□□□□ 0.88
UPF3AP3-201ENST00000420996 USP17L15C9J2P7 530 aa20.56■□□□□ 0.88
UPF3AP3-201ENST00000420996 USP17L13C9JLJ4 530 aa20.56■□□□□ 0.88
UPF3AP3-201ENST00000420996 USP17L11C9JVI0 530 aa20.56■□□□□ 0.88
UPF3AP3-201ENST00000420996 USP17L18D6R9N7 530 aa20.56■□□□□ 0.88
UPF3AP3-201ENST00000420996 USP17L22D6RA61 530 aa20.56■□□□□ 0.88
UPF3AP3-201ENST00000420996 USP17L17D6RBQ6 530 aa20.56■□□□□ 0.88
UPF3AP3-201ENST00000420996 USP17L19D6RCP7 530 aa20.56■□□□□ 0.88
UPF3AP3-201ENST00000420996 USP17L20D6RJB6 530 aa20.56■□□□□ 0.88
UPF3AP3-201ENST00000420996 USP17L24Q0WX57 530 aa20.56■□□□□ 0.88
UPF3AP3-201ENST00000420996 TMED8Q6PL24 325 aaPredicted RBP20.56■□□□□ 0.88
UPF3AP3-201ENST00000420996 MAGEB6Q8N7X4 407 aa20.56■□□□□ 0.88
UPF3AP3-201ENST00000420996 APBA2Q99767 749 aa20.56■□□□□ 0.88
UPF3AP3-201ENST00000420996 EHD4Q9H223 541 aa20.56■□□□□ 0.88
UPF3AP3-201ENST00000420996 PFASO15067 1338 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms