RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 ST3GAL1Q11201 340 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 NFIAQ12857 509 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 CIAPIN1Q6FI81 312 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 GIMAP6Q6P9H5 292 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 ARHGAP27Q6ZUM4 889 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 AGBL3Q8NEM8 1001 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 TEKT1Q969V4 418 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 JAKMIP1Q96N16 626 aaKnown RBP8.14□□□□□ -1.11
CPS1-202ENST00000417946 INCENPQ9NQS7 918 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 ANAPC4Q9UJX5 808 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 SERPINA10Q9UK55 444 aa8.14□□□□□ -1.11
CPS1-202ENST00000417946 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.14□□□□□ -1.11
CPS1-202ENST00000417946 COL2A1P02458 1487 aaPredicted RBP8.13□□□□□ -1.11
CPS1-202ENST00000417946 MAP3K7O43318 606 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 FGRP09769 529 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 USP17L8P0C7I0 530 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 GMPSP49915 693 aaPredicted RBP8.13□□□□□ -1.11
CPS1-202ENST00000417946 EXOSC10Q01780 885 aaKnown RBP8.13□□□□□ -1.11
CPS1-202ENST00000417946 CTDSPL2Q05D32 466 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 PPARAQ07869 468 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 TOB2Q14106 344 aaPredicted RBP8.13□□□□□ -1.11
CPS1-202ENST00000417946 CFAP100Q494V2 611 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 SBK1Q52WX2 424 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 SH3BP5LQ7L8J4 393 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 MAPKAPK5Q8IW41 473 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 ZFPM1Q8IX07 1006 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 TEX11Q8IYF3 940 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 MTMR14Q8NCE2 650 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 DDX12PQ92771 950 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 PRMT6Q96LA8 375 aaPredicted RBP8.13□□□□□ -1.11
CPS1-202ENST00000417946 TCEANC2Q96MN5 208 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 CRNKL1Q9BZJ0 848 aaKnown RBP8.13□□□□□ -1.11
CPS1-202ENST00000417946 NAPBQ9H115 298 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 ATP8A2Q9NTI2 1148 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 FAM198AQ9UFP1 575 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 CTNNA3Q9UI47 895 aa8.13□□□□□ -1.11
CPS1-202ENST00000417946 CNTNAP1P78357 1384 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 ATRNL1Q5VV63 1379 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 ASTN2O75129 1339 aaPredicted RBP8.12□□□□□ -1.11
CPS1-202ENST00000417946 USP17L12C9JPN9 530 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 USP17L21D6R901 530 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 LARGE1O95461 756 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 BAG3O95817 575 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 APPP05067 770 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 CASTP20810 708 aaKnown RBP8.12□□□□□ -1.11
CPS1-202ENST00000417946 RPS6KB1P23443 525 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 ANP32AP39687 249 aaKnown RBP8.12□□□□□ -1.11
CPS1-202ENST00000417946 SLC4A3P48751 1232 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 TDO2P48775 406 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 NEK4P51957 841 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 CACNB3P54284 484 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 GPR162Q16538 588 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 C12orf60Q5U649 245 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 RNF20Q5VTR2 975 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 RUFY3Q7L099 469 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 CYB5R4Q7L1T6 521 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 SLF2Q8IX21 1173 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 TGFBRAP1Q8WUH2 860 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 STAG1Q8WVM7 1258 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 JDP2Q8WYK2 163 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 LRCH3Q96II8 777 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 IPO9Q96P70 1041 aaKnown RBP8.12□□□□□ -1.11
CPS1-202ENST00000417946 IDI2Q9BXS1 227 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 AGXT2Q9BYV1 514 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 IRX2Q9BZI1 471 aaPredicted RBP8.12□□□□□ -1.11
CPS1-202ENST00000417946 ALDH8A1Q9H2A2 487 aaPredicted RBP8.12□□□□□ -1.11
CPS1-202ENST00000417946 USP40Q9NVE5 1235 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.12□□□□□ -1.11
CPS1-202ENST00000417946 PGAP2Q9UHJ9 254 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 PAPPA2Q9BXP8 1791 aa8.12□□□□□ -1.11
CPS1-202ENST00000417946 ZC3H4Q9UPT8 1303 aaKnown RBP8.11□□□□□ -1.11
CPS1-202ENST00000417946 ORC4O43929 436 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 SLURP2P0DP57 97 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 ZKSCAN1P17029 563 aaPredicted RBP8.11□□□□□ -1.11
CPS1-202ENST00000417946 RPS12P25398 132 aaKnown RBP8.11□□□□□ -1.11
CPS1-202ENST00000417946 PLCD1P51178 756 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 AK2P54819 239 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 GABPAQ06546 454 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 KRT32Q14532 448 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 TNIP1Q15025 636 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 E2F4Q16254 413 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 IMMTQ16891 758 aaKnown RBP8.11□□□□□ -1.11
CPS1-202ENST00000417946 AKNAD1Q5T1N1 836 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 C9orf131Q5VYM1 1079 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 CERS3Q8IU89 383 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 DYNLL2Q96FJ2 89 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 NEK1Q96PY6 1258 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 NACAP1Q9BZK3 213 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 OSBPL5Q9H0X9 879 aaPredicted RBP8.11□□□□□ -1.11
CPS1-202ENST00000417946 TDRD3Q9H7E2 651 aaKnown RBP8.11□□□□□ -1.11
CPS1-202ENST00000417946 DNAJC18Q9H819 358 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 SENP2Q9HC62 589 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 RNF181Q9P0P0 153 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 ARPP21Q9UBL0 812 aaPredicted RBP8.11□□□□□ -1.11
CPS1-202ENST00000417946 SAP30BPQ9UHR5 308 aaKnown RBP8.11□□□□□ -1.11
CPS1-202ENST00000417946 POLR2AP24928 1970 aaKnown RBP8.11□□□□□ -1.11
CPS1-202ENST00000417946 WDR90Q96KV7 1748 aa8.11□□□□□ -1.11
CPS1-202ENST00000417946 WDR19Q8NEZ3 1342 aa8.1□□□□□ -1.11
CPS1-202ENST00000417946 DDTLA6NHG4 134 aaPredicted RBP8.1□□□□□ -1.11
CPS1-202ENST00000417946 B4E1Z4 1266 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms