RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SHMT1P34896 483 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 RBM25P49756 843 aaKnown RBP17.12■□□□□ 0.33
SGCE-202ENST00000415788 FMR1Q06787 632 aaKnown RBP eCLIP17.12■□□□□ 0.33
SGCE-202ENST00000415788 TTLL12Q14166 644 aaPredicted RBP17.12■□□□□ 0.33
SGCE-202ENST00000415788 SKOR2Q2VWA4 1001 aaPredicted RBP17.12■□□□□ 0.33
SGCE-202ENST00000415788 CCDC17Q96LX7 622 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 NAP1L5Q96NT1 182 aaPredicted RBP17.12■□□□□ 0.33
SGCE-202ENST00000415788 GINM1Q9NU53 330 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 FAM196BA6NMK8 535 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 PHF20L1A8MW92 1017 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 SMIM22K7EJ46 135 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 ORC4O43929 436 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 CTNND1O60716 968 aaKnown RBP17.12■□□□□ 0.33
SGCE-202ENST00000415788 DDIT3P35638 169 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 TSGA10IPQ3SY00 556 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 CST9Q5W186 159 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 TBC1D10CQ8IV04 446 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 SLC44A5Q8NCS7 719 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.12■□□□□ 0.33
SGCE-202ENST00000415788 KCNB2Q92953 911 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 WRNIP1Q96S55 665 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 NBPF3Q9H094 633 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 CNNM2Q9H8M5 875 aa17.12■□□□□ 0.33
SGCE-202ENST00000415788 ANGEL1Q9UNK9 670 aaKnown RBP17.12■□□□□ 0.33
SGCE-202ENST00000415788 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.12■□□□□ 0.33
SGCE-202ENST00000415788 TRDNQ13061 729 aa17.11■□□□□ 0.33
SGCE-202ENST00000415788 KRT32Q14532 448 aa17.11■□□□□ 0.33
SGCE-202ENST00000415788 CERKLQ49MI3 558 aaPredicted RBP17.11■□□□□ 0.33
SGCE-202ENST00000415788 SIPA1L1O43166 1804 aa17.11■□□□□ 0.33
SGCE-202ENST00000415788 PAPPA2Q9BXP8 1791 aa17.11■□□□□ 0.33
SGCE-202ENST00000415788 RRP9O43818 475 aaKnown RBP17.1■□□□□ 0.33
SGCE-202ENST00000415788 MAP3K9P80192 1104 aa17.1■□□□□ 0.33
SGCE-202ENST00000415788 PRKG1Q13976 671 aa17.1■□□□□ 0.33
SGCE-202ENST00000415788 ANKRD13AQ8IZ07 590 aa17.1■□□□□ 0.33
SGCE-202ENST00000415788 ZNF444Q8N0Y2 327 aaPredicted RBP17.1■□□□□ 0.33
SGCE-202ENST00000415788 STK11IPQ8N1F8 1099 aa17.1■□□□□ 0.33
SGCE-202ENST00000415788 PANK2Q9BZ23 570 aa17.1■□□□□ 0.33
SGCE-202ENST00000415788 KRT23Q9C075 422 aa17.1■□□□□ 0.33
SGCE-202ENST00000415788 GZF1Q9H116 711 aaPredicted RBP17.1■□□□□ 0.33
SGCE-202ENST00000415788 GBP4Q96PP9 640 aa17.1■□□□□ 0.33
SGCE-202ENST00000415788 CSADQ9Y600 493 aa17.1■□□□□ 0.33
SGCE-202ENST00000415788 LAMA4Q16363 1823 aa17.09■□□□□ 0.33
SGCE-202ENST00000415788 TMEM88BA6NKF7 163 aa17.09■□□□□ 0.33
SGCE-202ENST00000415788 E7EWF7 191 aa17.09■□□□□ 0.33
SGCE-202ENST00000415788 HSP90AA1P07900 732 aaKnown RBP17.09■□□□□ 0.33
SGCE-202ENST00000415788 SLURP2P0DP57 97 aa17.09■□□□□ 0.33
SGCE-202ENST00000415788 RASA1P20936 1047 aa17.09■□□□□ 0.33
SGCE-202ENST00000415788 CAP2P40123 477 aa17.09■□□□□ 0.33
SGCE-202ENST00000415788 NOL9Q5SY16 702 aaKnown RBP17.09■□□□□ 0.33
SGCE-202ENST00000415788 LDLRAD1Q5T700 205 aa17.09■□□□□ 0.33
SGCE-202ENST00000415788 ESR2Q92731 530 aa17.09■□□□□ 0.33
SGCE-202ENST00000415788 TOMM22Q9NS69 142 aa17.09■□□□□ 0.33
SGCE-202ENST00000415788 PRDM1O75626 825 aa17.08■□□□□ 0.33
SGCE-202ENST00000415788 ASNSP08243 561 aa17.08■□□□□ 0.33
SGCE-202ENST00000415788 ANAPC15P60006 121 aa17.08■□□□□ 0.33
SGCE-202ENST00000415788 ABCB5Q2M3G0 1257 aa17.08■□□□□ 0.33
SGCE-202ENST00000415788 RALYLQ86SE5 291 aaKnown RBP17.08■□□□□ 0.33
SGCE-202ENST00000415788 SCYL3Q8IZE3 742 aa17.08■□□□□ 0.33
SGCE-202ENST00000415788 SPRYD3Q8NCJ5 442 aa17.08■□□□□ 0.33
SGCE-202ENST00000415788 NCOA7Q8NI08 942 aa17.08■□□□□ 0.33
SGCE-202ENST00000415788 CABP5Q9NP86 173 aa17.08■□□□□ 0.33
SGCE-202ENST00000415788 FZD1Q9UP38 647 aa17.08■□□□□ 0.33
SGCE-202ENST00000415788 NEDD4P46934 1319 aa17.08■□□□□ 0.32
SGCE-202ENST00000415788 INPP5BP32019 993 aa17.07■□□□□ 0.32
SGCE-202ENST00000415788 TMEM179Q6ZVK1 233 aa17.07■□□□□ 0.32
SGCE-202ENST00000415788 PICK1Q9NRD5 415 aa17.07■□□□□ 0.32
SGCE-202ENST00000415788 PLIN4Q96Q06 1357 aa17.07■□□□□ 0.32
SGCE-202ENST00000415788 TSPY2A6NKD2 308 aa17.07■□□□□ 0.32
SGCE-202ENST00000415788 ESPNB1AK53 854 aa17.07■□□□□ 0.32
SGCE-202ENST00000415788 RANBP6O60518 1105 aaKnown RBP17.07■□□□□ 0.32
SGCE-202ENST00000415788 APLP1P51693 650 aa17.07■□□□□ 0.32
SGCE-202ENST00000415788 VGLL4Q14135 290 aa17.07■□□□□ 0.32
SGCE-202ENST00000415788 RRP12Q5JTH9 1297 aaKnown RBP17.07■□□□□ 0.32
SGCE-202ENST00000415788 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.07■□□□□ 0.32
SGCE-202ENST00000415788 MOB2Q70IA6 237 aa17.07■□□□□ 0.32
SGCE-202ENST00000415788 RASEFQ8IZ41 740 aa17.07■□□□□ 0.32
SGCE-202ENST00000415788 SNX14Q9Y5W7 946 aa17.07■□□□□ 0.32
SGCE-202ENST00000415788 TACC3Q9Y6A5 838 aa17.07■□□□□ 0.32
SGCE-202ENST00000415788 UBE2Q2LH0YL09 131 aa17.06■□□□□ 0.32
SGCE-202ENST00000415788 GDF11O95390 407 aa17.06■□□□□ 0.32
SGCE-202ENST00000415788 HMGB1P09429 215 aaKnown RBP17.06■□□□□ 0.32
SGCE-202ENST00000415788 TSPY3P0CV98 308 aa17.06■□□□□ 0.32
SGCE-202ENST00000415788 TSPY8P0CW00 308 aa17.06■□□□□ 0.32
SGCE-202ENST00000415788 AKR1B1P15121 316 aa17.06■□□□□ 0.32
SGCE-202ENST00000415788 PPP4R3BQ5MIZ7 849 aa17.06■□□□□ 0.32
SGCE-202ENST00000415788 STOX1Q6ZVD7 989 aa17.06■□□□□ 0.32
SGCE-202ENST00000415788 SAPCD2Q86UD0 394 aa17.06■□□□□ 0.32
SGCE-202ENST00000415788 INCENPQ9NQS7 918 aa17.06■□□□□ 0.32
SGCE-202ENST00000415788 ZBTB21Q9ULJ3 1066 aa17.06■□□□□ 0.32
SGCE-202ENST00000415788 TAF6LQ9Y6J9 622 aa17.06■□□□□ 0.32
SGCE-202ENST00000415788 TLL2Q9Y6L7 1015 aa17.06■□□□□ 0.32
SGCE-202ENST00000415788 TRPM7Q96QT4 1865 aa17.06■□□□□ 0.32
SGCE-202ENST00000415788 MPHOSPH10O00566 681 aaKnown RBP17.05■□□□□ 0.32
SGCE-202ENST00000415788 GH2P01242 217 aa17.05■□□□□ 0.32
SGCE-202ENST00000415788 PSMA5P28066 241 aa17.05■□□□□ 0.32
SGCE-202ENST00000415788 HUNKP57058 714 aa17.05■□□□□ 0.32
SGCE-202ENST00000415788 TFAP4Q01664 338 aa17.05■□□□□ 0.32
SGCE-202ENST00000415788 RRP1BQ14684 758 aaKnown RBP17.05■□□□□ 0.32
SGCE-202ENST00000415788 NEDD1Q8NHV4 660 aa17.05■□□□□ 0.32
SGCE-202ENST00000415788 ZKSCAN4Q969J2 545 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms