RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 GPHNQ9NQX3 736 aaPredicted RBP12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 ZNF277Q9NRM2 450 aaPredicted RBP12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 TMOD2Q9NZR1 351 aa12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 ORC3Q9UBD5 711 aaPredicted RBP12.03□□□□□ -0.48
SNORD88C-201ENST00000408061 TSPY3P0CV98 308 aa12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 TSPY8P0CW00 308 aa12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 NCLP19338 710 aaKnown RBP12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 NOVP48745 357 aa12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 SCNN1DP51172 638 aa12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 PLCD1P51178 756 aa12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 SSRP1Q08945 709 aaKnown RBP12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 NTRK3Q16288 839 aa12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 CIAPIN1Q6FI81 312 aa12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 TMEM87AQ8NBN3 555 aa12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 LZTS2Q9BRK4 669 aa12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 RNF26Q9BY78 433 aaPredicted RBP12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 KCNQ5Q9NR82 932 aa12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 PI4KBQ9UBF8 816 aa12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 SERPINB13Q9UIV8 391 aa12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 PLIN4Q96Q06 1357 aa12.02□□□□□ -0.49
SNORD88C-201ENST00000408061 VPS37CA5D8V6 355 aaPredicted RBP12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 PSMD14O00487 310 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 TRAK2O60296 914 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 JAK2O60674 1132 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 FMNL1O95466 1100 aaPredicted RBP12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 MBD3O95983 291 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 CYP2D6P10635 497 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 XBP1P17861 261 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 RASA1P20936 1047 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 SMARCA1P28370 1054 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 ADD1P35611 737 aaKnown RBP12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 RBM5P52756 815 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 TROAPQ12815 778 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 DLGAP5Q15398 846 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 CFAP100Q494V2 611 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 MCTP1Q6DN14 999 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 METTL16Q86W50 562 aaKnown RBP12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 MICU3Q86XE3 530 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 FBXO18Q8NFZ0 1043 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 CTCFLQ8NI51 663 aaPredicted RBP12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 DPF2Q92785 391 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 C8orf76Q96K31 380 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 SCAND2PQ9GZW5 306 aaPredicted RBP12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 KAT14Q9H8E8 782 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 NCOA5Q9HCD5 579 aaKnown RBP12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 FAM217BQ9NTX9 383 aaPredicted RBP12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 CFAP45Q9UL16 551 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 BCS1LQ9Y276 419 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 ATRNL1Q5VV63 1379 aa12.01□□□□□ -0.49
SNORD88C-201ENST00000408061 MYO1BO43795 1136 aa12□□□□□ -0.49
SNORD88C-201ENST00000408061 PRDM1O75626 825 aa12□□□□□ -0.49
SNORD88C-201ENST00000408061 DEXIO95424 95 aa12□□□□□ -0.49
SNORD88C-201ENST00000408061 FDPSP14324 419 aaKnown RBP12□□□□□ -0.49
SNORD88C-201ENST00000408061 KRT85P78386 507 aa12□□□□□ -0.49
SNORD88C-201ENST00000408061 AKAP17AQ02040 695 aaKnown RBP12□□□□□ -0.49
SNORD88C-201ENST00000408061 CXCL9Q07325 125 aa12□□□□□ -0.49
SNORD88C-201ENST00000408061 TRIM29Q14134 588 aa12□□□□□ -0.49
SNORD88C-201ENST00000408061 KLHL40Q2TBA0 621 aa12□□□□□ -0.49
SNORD88C-201ENST00000408061 BRAPQ7Z569 592 aa12□□□□□ -0.49
SNORD88C-201ENST00000408061 CRACR2BQ8N4Y2 399 aaPredicted RBP12□□□□□ -0.49
SNORD88C-201ENST00000408061 DDX11Q96FC9 970 aa12□□□□□ -0.49
SNORD88C-201ENST00000408061 ZKSCAN3Q9BRR0 538 aa12□□□□□ -0.49
SNORD88C-201ENST00000408061 MXD3Q9BW11 206 aa12□□□□□ -0.49
SNORD88C-201ENST00000408061 PPP1R1BQ9UD71 204 aaPredicted RBP12□□□□□ -0.49
SNORD88C-201ENST00000408061 SAP30BPQ9UHR5 308 aaKnown RBP12□□□□□ -0.49
SNORD88C-201ENST00000408061 MYH8P13535 1937 aa11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 PSDA5PKW4 1024 aaPredicted RBP11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 SPDYE2BA6NHP3 402 aa11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 NFKBIEO00221 500 aa11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 PRPF3O43395 683 aaKnown RBP11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 SPDYE6P0CI01 402 aa11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 TOP1P11387 765 aaKnown RBP11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 CDC27P30260 824 aa11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 EIF6P56537 245 aaKnown RBP11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 RCSD1Q6JBY9 416 aa11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 FAM83AQ86UY5 434 aa11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 NKX2-3Q8TAU0 364 aa11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 FAM151AQ8WW52 585 aa11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 DYNLL2Q96FJ2 89 aa11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 ZNF396Q96N95 335 aaPredicted RBP11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 LMBRD1Q9NUN5 540 aa11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 HERC5Q9UII4 1024 aaKnown RBP11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 SYNPO2Q9UMS6 1093 aa11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 ELP1O95163 1332 aa11.99□□□□□ -0.49
SNORD88C-201ENST00000408061 TCHHQ07283 1943 aa11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 FZD9O00144 591 aa11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 RAD17O75943 681 aa11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 ZNF280AP59817 542 aaPredicted RBP11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 PICALMQ13492 652 aa11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 FAM47AQ5JRC9 791 aa11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 STK11IPQ8N1F8 1099 aa11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 PNMA1Q8ND90 353 aa11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 PRMT6Q96LA8 375 aaPredicted RBP11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 ALG1Q9BT22 464 aa11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 TRIM34Q9BYJ4 488 aa11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 SENP2Q9HC62 589 aa11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 DDX4Q9NQI0 724 aaKnown RBP11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 IL17RBQ9NRM6 502 aa11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 ISY1Q9ULR0 285 aaKnown RBP11.98□□□□□ -0.49
SNORD88C-201ENST00000408061 TBC1D12O60347 775 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms