RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 LMNB1P20700 586 aa7.76□□□□□ -1.17
HMGB1P13-201ENST00000406019 ETF1P62495 437 aaKnown RBP7.76□□□□□ -1.17
HMGB1P13-201ENST00000406019 PRAMEF13Q5VWM6 474 aa7.76□□□□□ -1.17
HMGB1P13-201ENST00000406019 PLD6Q8N2A8 252 aaKnown RBP7.76□□□□□ -1.17
HMGB1P13-201ENST00000406019 GOLM1Q8NBJ4 401 aa7.76□□□□□ -1.17
HMGB1P13-201ENST00000406019 TNKS2Q9H2K2 1166 aa7.76□□□□□ -1.17
HMGB1P13-201ENST00000406019 BSDC1Q9NW68 430 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P13-201ENST00000406019 OAS3Q9Y6K5 1087 aaKnown RBP7.76□□□□□ -1.17
HMGB1P13-201ENST00000406019 MINDY4BA8MYZ0 360 aa7.75□□□□□ -1.17
HMGB1P13-201ENST00000406019 CRKP46108 304 aa7.75□□□□□ -1.17
HMGB1P13-201ENST00000406019 ZC3H6P61129 1189 aaKnown RBP7.75□□□□□ -1.17
HMGB1P13-201ENST00000406019 TMEM201Q5SNT2 666 aa7.75□□□□□ -1.17
HMGB1P13-201ENST00000406019 CDC37L1Q7L3B6 337 aa7.75□□□□□ -1.17
HMGB1P13-201ENST00000406019 VSIG10LQ86VR7 867 aa7.75□□□□□ -1.17
HMGB1P13-201ENST00000406019 GGT7Q9UJ14 662 aa7.75□□□□□ -1.17
HMGB1P13-201ENST00000406019 DNAJA2O60884 412 aa7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 PGRP06401 933 aa7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 EIF4A3P38919 411 aaKnown RBP7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 GP2P55259 537 aaKnown RBP7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 MPP2Q14168 576 aa7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 SNAP47Q5SQN1 464 aa7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 C22orf34Q6ZV56 151 aa7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 HS2ST1Q7LGA3 356 aa7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 REC114Q7Z4M0 266 aa7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 MCATQ8IVS2 390 aaKnown RBP7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 TMEM87AQ8NBN3 555 aa7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 DNAJB8Q8NHS0 232 aa7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 RIN3Q8TB24 985 aa7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 BCL7CQ8WUZ0 217 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 TMEM87BQ96K49 555 aa7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 METTL5Q9NRN9 209 aaKnown RBP7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 COL17A1Q9UMD9 1497 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P13-201ENST00000406019 SCAMP3O14828 347 aaKnown RBP7.73□□□□□ -1.17
HMGB1P13-201ENST00000406019 CEACAM5P06731 702 aa7.73□□□□□ -1.17
HMGB1P13-201ENST00000406019 METTL16Q86W50 562 aaKnown RBP7.73□□□□□ -1.17
HMGB1P13-201ENST00000406019 SPACA3Q8IXA5 215 aa7.73□□□□□ -1.17
HMGB1P13-201ENST00000406019 MFSD2AQ8NA29 543 aa7.73□□□□□ -1.17
HMGB1P13-201ENST00000406019 NETO1Q8TDF5 533 aa7.73□□□□□ -1.17
HMGB1P13-201ENST00000406019 PPP1R13LQ8WUF5 828 aa7.73□□□□□ -1.17
HMGB1P13-201ENST00000406019 PAK6Q9NQU5 681 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P13-201ENST00000406019 WNT11O96014 354 aa7.72□□□□□ -1.17
HMGB1P13-201ENST00000406019 ZNF76P36508 570 aa7.72□□□□□ -1.17
HMGB1P13-201ENST00000406019 HDLBPQ00341 1268 aaKnown RBP7.72□□□□□ -1.17
HMGB1P13-201ENST00000406019 NKPD1Q17RQ9 610 aa7.72□□□□□ -1.17
HMGB1P13-201ENST00000406019 SLC6A19Q695T7 634 aa7.72□□□□□ -1.17
HMGB1P13-201ENST00000406019 SPRED2Q7Z698 418 aa7.72□□□□□ -1.17
HMGB1P13-201ENST00000406019 NBPF11Q86T75 865 aa7.72□□□□□ -1.17
HMGB1P13-201ENST00000406019 ZNF296Q8WUU4 475 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P13-201ENST00000406019 SREK1Q8WXA9 508 aaKnown RBP7.72□□□□□ -1.17
HMGB1P13-201ENST00000406019 MIPEPQ99797 713 aa7.72□□□□□ -1.17
HMGB1P13-201ENST00000406019 DPH2Q9BQC3 489 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P13-201ENST00000406019 MAPK8IP1Q9UQF2 711 aa7.72□□□□□ -1.17
HMGB1P13-201ENST00000406019 ROBO2Q9HCK4 1378 aa7.71□□□□□ -1.17
HMGB1P13-201ENST00000406019 PRR33A8MZF0 331 aa7.71□□□□□ -1.18
HMGB1P13-201ENST00000406019 HTR3BO95264 441 aa7.71□□□□□ -1.18
HMGB1P13-201ENST00000406019 ZNF865P0CJ78 1059 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P13-201ENST00000406019 PDE4BQ07343 736 aa7.71□□□□□ -1.18
HMGB1P13-201ENST00000406019 LETMD1Q6P1Q0 360 aa7.71□□□□□ -1.18
HMGB1P13-201ENST00000406019 DRC1Q96MC2 740 aa7.71□□□□□ -1.18
HMGB1P13-201ENST00000406019 SUPT16HQ9Y5B9 1047 aaKnown RBP7.71□□□□□ -1.18
HMGB1P13-201ENST00000406019 TLR3O15455 904 aaKnown RBP7.7□□□□□ -1.18
HMGB1P13-201ENST00000406019 BPNT1O95861 308 aa7.7□□□□□ -1.18
HMGB1P13-201ENST00000406019 IFI16Q16666 785 aaKnown RBP7.7□□□□□ -1.18
HMGB1P13-201ENST00000406019 ZNF574Q6ZN55 896 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P13-201ENST00000406019 EAF1Q96JC9 268 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P13-201ENST00000406019 REV1Q9UBZ9 1251 aa7.7□□□□□ -1.18
HMGB1P13-201ENST00000406019 GTF2IRD1Q9UHL9 959 aa7.7□□□□□ -1.18
HMGB1P13-201ENST00000406019 UPK3BL1B0FP48 263 aa7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 UPK3BL2E5RIL1 263 aa7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 GRIN3BO60391 1043 aa7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 ATE1O95260 518 aa7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 PLCG1P19174 1290 aa7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 ERCC5P28715 1186 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 RAD51AP2Q09MP3 1159 aa7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 ZNF394Q53GI3 561 aa7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 NAALADL2Q58DX5 795 aa7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 CBLL1Q75N03 491 aa7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 SLFN12Q8IYM2 578 aa7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 ABI1Q8IZP0 508 aa7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 MISP3Q96FF7 219 aa7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 PRDM5Q9NQX1 630 aaPredicted RBP7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 UBP1Q9NZI7 540 aa7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 ADGRE2Q9UHX3 823 aa7.69□□□□□ -1.18
HMGB1P13-201ENST00000406019 RACK1P63244 317 aaKnown RBP7.68□□□□□ -1.18
HMGB1P13-201ENST00000406019 PRKCQQ04759 706 aa7.68□□□□□ -1.18
HMGB1P13-201ENST00000406019 BNIP3Q12983 259 aa7.68□□□□□ -1.18
HMGB1P13-201ENST00000406019 XAGE3Q8WTP9 111 aa7.68□□□□□ -1.18
HMGB1P13-201ENST00000406019 CYB5D2Q8WUJ1 264 aa7.68□□□□□ -1.18
HMGB1P13-201ENST00000406019 NT5C1AQ9BXI3 368 aa7.68□□□□□ -1.18
HMGB1P13-201ENST00000406019 EHMT1Q9H9B1 1298 aa7.68□□□□□ -1.18
HMGB1P13-201ENST00000406019 BRMS1Q9HCU9 246 aa7.68□□□□□ -1.18
HMGB1P13-201ENST00000406019 VAV3Q9UKW4 847 aa7.68□□□□□ -1.18
HMGB1P13-201ENST00000406019 CAPN6Q9Y6Q1 641 aa7.68□□□□□ -1.18
HMGB1P13-201ENST00000406019 ITIH2P19823 946 aa7.67□□□□□ -1.18
HMGB1P13-201ENST00000406019 CD96P40200 585 aa7.67□□□□□ -1.18
HMGB1P13-201ENST00000406019 SLITRK4Q8IW52 837 aa7.67□□□□□ -1.18
HMGB1P13-201ENST00000406019 STK11IPQ8N1F8 1099 aa7.67□□□□□ -1.18
HMGB1P13-201ENST00000406019 FBXL18Q96ME1 805 aa7.67□□□□□ -1.18
HMGB1P13-201ENST00000406019 DDX41Q9UJV9 622 aaKnown RBP7.67□□□□□ -1.18
HMGB1P13-201ENST00000406019 PCDHGB7Q9Y5F8 929 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms