RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 DCAF15Q66K64 600 aa7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 NAA16Q6N069 864 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 ZSCAN29Q8IWY8 852 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 SH3RF3Q8TEJ3 882 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 ZNF296Q8WUU4 475 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 BRI3BPQ8WY22 251 aa7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 ABHD8Q96I13 439 aa7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 ZNF512BQ96KM6 892 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 ANTXR1Q9H6X2 564 aa7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 AATFQ9NY61 560 aaKnown RBP eCLIP7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 ATRNL1Q5VV63 1379 aa7.05□□□□□ -1.28
HMGB1P20-201ENST00000402555 CCL15-CCL14A0A0B4J2E2 113 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 GPR25O00155 361 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 IRF6O14896 467 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 SMARCA5O60264 1052 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 IDH1O75874 414 aaKnown RBP7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 CYP7A1P22680 504 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 RRP1P56182 461 aaKnown RBP7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 DYNLL1P63167 89 aaKnown RBP7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 CRHR2Q13324 411 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 CCL15Q16663 113 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 CCDC84Q86UT8 332 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 ERO1BQ86YB8 467 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 TEX11Q8IYF3 940 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 FAM43AQ8N2R8 423 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 MIGA1Q8NAN2 632 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 DDX12PQ92771 950 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 HOOK2Q96ED9 719 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 KIF1BPQ96EK5 621 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 EDC3Q96F86 508 aaKnown RBP7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 CHMP4BQ9H444 224 aaKnown RBP7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 ZNF112Q9UJU3 913 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 ARIH1Q9Y4X5 557 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 LAMB1P07942 1786 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 CDK5RAP2Q96SN8 1893 aa7.04□□□□□ -1.28
HMGB1P20-201ENST00000402555 TESPA1A2RU30 521 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 CCDC85CA6NKD9 419 aa7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 SPDYE16A6NNV3 312 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 PHF20L1A8MW92 1017 aa7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 RAB11FIP3O75154 756 aa7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 ALDH1A1P00352 501 aa7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 IFIT2P09913 472 aaKnown RBP7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 GTF2A2P52657 109 aa7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 INHBEP58166 350 aa7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 PPIL2Q13356 520 aa7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 SLC4A8Q2Y0W8 1093 aa7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 LAPTM4BQ86VI4 370 aa7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 MAPKAPK5Q8IW41 473 aa7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 CLASRPQ8N2M8 674 aaKnown RBP7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 MAGEB6Q8N7X4 407 aa7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 DNAJC2Q99543 621 aaKnown RBP7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 NOL10Q9BSC4 688 aaKnown RBP7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 OSBPL5Q9H0X9 879 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P20-201ENST00000402555 SIPA1L1O43166 1804 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 GOLIM4O00461 696 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 FKTNO75072 461 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 BAG3O95817 575 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 CETPP11597 493 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 PPP4CP60510 307 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 CAP1Q01518 475 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 PPATQ06203 517 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 SNAPC2Q13487 334 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 RRP1BQ14684 758 aaKnown RBP7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 TAF1CQ15572 869 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 E2F4Q16254 413 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 SLFNL1Q499Z3 407 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 NOL9Q5SY16 702 aaKnown RBP7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 OTUD7BQ6GQQ9 843 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 CTU1Q7Z7A3 348 aaKnown RBP7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 TGFBRAP1Q8WUH2 860 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 CRBNQ96SW2 442 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 CFHR5Q9BXR6 569 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 LRRCC1Q9C099 1032 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 BOLA2Q9H3K6 86 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 SAP30BPQ9UHR5 308 aaKnown RBP7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 PCDHB15Q9Y5E8 787 aa7.02□□□□□ -1.29
HMGB1P20-201ENST00000402555 FLT1P17948 1338 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 DOCK1Q14185 1865 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 TRIM6-TRIM34B2RNG4 842 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 BTBD19C9JJ37 291 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 MAP4K4O95819 1239 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 CHGBP05060 677 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 PDE6AP16499 860 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 MAP3K10Q02779 954 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 MAP3K12Q12852 859 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 MOGSQ13724 837 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 SHROOM1Q2M3G4 852 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 TSHZ3Q63HK5 1081 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 SCYL3Q8IZE3 742 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 CD99L2Q8TCZ2 262 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 DCTPP1Q9H773 170 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 PICK1Q9NRD5 415 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 KIAA1468Q9P260 1216 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 PALD1Q9ULE6 856 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 KCNH4Q9UQ05 1017 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 ZHX2Q9Y6X8 837 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 FOCADQ5VW36 1801 aa7.01□□□□□ -1.29
HMGB1P20-201ENST00000402555 COL2A1P02458 1487 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms