RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 PPP2R3AQ06190 1150 aa20.33■□□□□ 0.84
COL18A1-204ENST00000400337 CCDC25Q86WR0 208 aa20.33■□□□□ 0.84
COL18A1-204ENST00000400337 CFBP00751 764 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 UGGT1Q9NYU2 1555 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 TLDC2A0PJX2 215 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 TNFAIP3P21580 790 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 PPP1R7Q15435 360 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 GREM2Q9H772 168 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 USP40Q9NVE5 1235 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 TTF2Q9UNY4 1162 aaKnown RBP20.32■□□□□ 0.84
COL18A1-204ENST00000400337 MLH3Q9UHC1 1453 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 CA8P35219 290 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 PNOCQ13519 176 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 ZSCAN10Q96SZ4 725 aaPredicted RBP20.32■□□□□ 0.84
COL18A1-204ENST00000400337 SERTAD1Q9UHV2 236 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 DNM3Q9UQ16 869 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 MYO5CQ9NQX4 1742 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 COPRSQ9NQ92 184 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 VPS18Q9P253 973 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 IGSF1Q8N6C5 1336 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 CAPN2P17655 700 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 NAPGQ99747 312 aaPredicted RBP20.32■□□□□ 0.84
COL18A1-204ENST00000400337 SELENOSQ9BQE4 189 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 STMN4Q9H169 189 aaPredicted RBP20.32■□□□□ 0.84
COL18A1-204ENST00000400337 MTUS1Q9ULD2 1270 aa20.32■□□□□ 0.84
COL18A1-204ENST00000400337 MAP3K15Q6ZN16 1313 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 PFKFB2O60825 505 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 ALDH1B1P30837 517 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 ADALQ6DHV7 355 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 USP28Q96RU2 1077 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 NSRP1Q9H0G5 558 aaKnown RBP20.31■□□□□ 0.84
COL18A1-204ENST00000400337 DNAJC21Q5F1R6 531 aaKnown RBP20.31■□□□□ 0.84
COL18A1-204ENST00000400337 ARHGEF25Q86VW2 580 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 NELFBQ8WX92 580 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 PUS3Q9BZE2 481 aaKnown RBP20.31■□□□□ 0.84
COL18A1-204ENST00000400337 SMCO2A6NFE2 343 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 KRT9P35527 623 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 GPIHBP1Q8IV16 184 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 TTC16Q8NEE8 873 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 BIN2Q9UBW5 565 aaPredicted RBP20.31■□□□□ 0.84
COL18A1-204ENST00000400337 KDM6BO15054 1643 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 PKP1Q13835 747 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 MTMR6Q9Y217 621 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.31■□□□□ 0.843e-6■■■■□ 25.3
COL18A1-204ENST00000400337 EFCAB6Q5THR3 1501 aa20.31■□□□□ 0.84
COL18A1-204ENST00000400337 APBA3O96018 575 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 TUBBP07437 444 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 CHRNDQ07001 517 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 NSMFQ6X4W1 530 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 NELFCDQ8IXH7 590 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 MTRF1LQ9UGC7 380 aaKnown RBP20.3■□□□□ 0.84
COL18A1-204ENST00000400337 IMPACTQ9P2X3 320 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 ASAP1Q9ULH1 1129 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 TMEM94Q12767 1356 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 PLEKHG1Q9ULL1 1385 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 SEL1L2Q5TEA6 688 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 FANCBQ8NB91 859 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 SUPT20HQ8NEM7 779 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 ERO1AQ96HE7 468 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 IFT74Q96LB3 600 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 CCDC114Q96M63 670 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 DBNLQ9UJU6 430 aaKnown RBP20.3■□□□□ 0.84
COL18A1-204ENST00000400337 ASIC2Q16515 512 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 TICAM2Q86XR7 235 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 UNC5CLQ8IV45 518 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 NOSTRINQ8IVI9 506 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 FNBP4Q8N3X1 1017 aaPredicted RBP20.3■□□□□ 0.84
COL18A1-204ENST00000400337 JAKMIP2Q96AA8 810 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 TLR7Q9NYK1 1049 aaKnown RBP20.3■□□□□ 0.84
COL18A1-204ENST00000400337 TNKSO95271 1327 aa20.3■□□□□ 0.84
COL18A1-204ENST00000400337 PFKFB1P16118 471 aa20.29■□□□□ 0.84
COL18A1-204ENST00000400337 CALCOCO2Q13137 446 aa20.29■□□□□ 0.84
COL18A1-204ENST00000400337 KIFAP3Q92845 792 aa20.29■□□□□ 0.84
COL18A1-204ENST00000400337 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.29■□□□□ 0.841e-6■■■■□ 20.1
COL18A1-204ENST00000400337 SPOPO43791 374 aa20.29■□□□□ 0.84
COL18A1-204ENST00000400337 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.29■□□□□ 0.84
COL18A1-204ENST00000400337 NUP58Q9BVL2 599 aa20.29■□□□□ 0.84
COL18A1-204ENST00000400337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.29■□□□□ 0.84
COL18A1-204ENST00000400337 STAP2Q9UGK3 403 aa20.29■□□□□ 0.84
COL18A1-204ENST00000400337 RNASE9P60153 205 aaKnown RBP20.29■□□□□ 0.84
COL18A1-204ENST00000400337 PRKG1Q13976 671 aa20.29■□□□□ 0.84
COL18A1-204ENST00000400337 PRAMEF22A3QJZ6 481 aa20.29■□□□□ 0.84
COL18A1-204ENST00000400337 ADORA1P30542 326 aa20.29■□□□□ 0.84
COL18A1-204ENST00000400337 PHKA1P46020 1223 aa20.29■□□□□ 0.84
COL18A1-204ENST00000400337 MTX1Q13505 466 aa20.29■□□□□ 0.84
COL18A1-204ENST00000400337 DLGAP5Q15398 846 aa20.29■□□□□ 0.84
COL18A1-204ENST00000400337 LRRC45Q96CN5 670 aa20.29■□□□□ 0.84
COL18A1-204ENST00000400337 TIGD1Q96MW7 591 aa20.29■□□□□ 0.84
COL18A1-204ENST00000400337 NR1I2O75469 434 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 PPM1FP49593 454 aaPredicted RBP20.28■□□□□ 0.84
COL18A1-204ENST00000400337 LONRF3Q496Y0 759 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 MYCT1Q8N699 235 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 TEKT1Q969V4 418 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 SAMD9LQ8IVG5 1584 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 LSG1Q9H089 658 aaKnown RBP20.28■□□□□ 0.84
COL18A1-204ENST00000400337 ZEB2O60315 1214 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 PDE8BO95263 885 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 IVLP07476 585 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 LOC102724428A0A0B4J2F2 783 aa20.28■□□□□ 0.84
COL18A1-204ENST00000400337 PPIP5K2O43314 1243 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms