RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 SHISA4Q96DD7 197 aa17.68■□□□□ 0.42
MBD1-209ENST00000398495 BTBD18B2RXH4 712 aa17.67■□□□□ 0.42
MBD1-209ENST00000398495 PLSCR1O15162 318 aa17.67■□□□□ 0.42
MBD1-209ENST00000398495 CTAGE5O15320 804 aa17.67■□□□□ 0.42
MBD1-209ENST00000398495 WDHD1O75717 1129 aaPredicted RBP17.67■□□□□ 0.42
MBD1-209ENST00000398495 DDAH1O94760 285 aa17.67■□□□□ 0.42
MBD1-209ENST00000398495 MARCKSP29966 332 aaPredicted RBP17.67■□□□□ 0.42
MBD1-209ENST00000398495 PPP4CP60510 307 aa17.67■□□□□ 0.42
MBD1-209ENST00000398495 TROAPQ12815 778 aa17.67■□□□□ 0.42
MBD1-209ENST00000398495 LUZP1Q86V48 1076 aa17.67■□□□□ 0.42
MBD1-209ENST00000398495 NOSTRINQ8IVI9 506 aa17.67■□□□□ 0.42
MBD1-209ENST00000398495 DIS3L2Q8IYB7 885 aaKnown RBP17.67■□□□□ 0.42
MBD1-209ENST00000398495 DYNLL2Q96FJ2 89 aa17.67■□□□□ 0.42
MBD1-209ENST00000398495 DNAJC25Q9H1X3 360 aa17.67■□□□□ 0.42
MBD1-209ENST00000398495 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.67■□□□□ 0.42
MBD1-209ENST00000398495 ROBO3Q96MS0 1386 aa17.67■□□□□ 0.42
MBD1-209ENST00000398495 TNS1Q9HBL0 1735 aaKnown RBP17.67■□□□□ 0.42
MBD1-209ENST00000398495 C6orf229H3BNL8 230 aa17.67■□□□□ 0.42
MBD1-209ENST00000398495 PDE4BQ07343 736 aa17.67■□□□□ 0.42
MBD1-209ENST00000398495 ZNF772Q68DY9 489 aaPredicted RBP17.67■□□□□ 0.42
MBD1-209ENST00000398495 TGFBRAP1Q8WUH2 860 aa17.67■□□□□ 0.42
MBD1-209ENST00000398495 RNF26Q9BY78 433 aaPredicted RBP17.67■□□□□ 0.42
MBD1-209ENST00000398495 hCG_1642624A0A1W2PR95 340 aa17.66■□□□□ 0.42
MBD1-209ENST00000398495 BAG3O95817 575 aa17.66■□□□□ 0.42
MBD1-209ENST00000398495 LDHCP07864 332 aa17.66■□□□□ 0.42
MBD1-209ENST00000398495 BTDP43251 543 aa17.66■□□□□ 0.42
MBD1-209ENST00000398495 PPP2R5BQ15173 497 aa17.66■□□□□ 0.42
MBD1-209ENST00000398495 NOL10Q9BSC4 688 aaKnown RBP17.66■□□□□ 0.42
MBD1-209ENST00000398495 CALM1P0DP23 149 aa17.66■□□□□ 0.42
MBD1-209ENST00000398495 CALM2P0DP24 149 aa17.66■□□□□ 0.42
MBD1-209ENST00000398495 CALM3P0DP25 149 aa17.66■□□□□ 0.42
MBD1-209ENST00000398495 SAFBQ15424 915 aaKnown RBP eCLIP17.66■□□□□ 0.42
MBD1-209ENST00000398495 PKN1Q16512 942 aa17.66■□□□□ 0.42
MBD1-209ENST00000398495 TMTC3Q6ZXV5 915 aa17.66■□□□□ 0.42
MBD1-209ENST00000398495 MAPKAPK5Q8IW41 473 aa17.66■□□□□ 0.42
MBD1-209ENST00000398495 SP8Q8IXZ3 490 aa17.66■□□□□ 0.42
MBD1-209ENST00000398495 RBM28Q9NW13 759 aaKnown RBP17.66■□□□□ 0.42
MBD1-209ENST00000398495 NOL7Q9UMY1 257 aaKnown RBP17.66■□□□□ 0.42
MBD1-209ENST00000398495 TSPY2A6NKD2 308 aa17.65■□□□□ 0.42
MBD1-209ENST00000398495 PTMAP06454 111 aaKnown RBP17.65■□□□□ 0.42
MBD1-209ENST00000398495 PFKFB1P16118 471 aa17.65■□□□□ 0.42
MBD1-209ENST00000398495 PLCB2Q00722 1185 aa17.65■□□□□ 0.42
MBD1-209ENST00000398495 OLFM4Q6UX06 510 aa17.65■□□□□ 0.42
MBD1-209ENST00000398495 C11orf57Q6ZUT1 292 aaPredicted RBP17.65■□□□□ 0.42
MBD1-209ENST00000398495 TMC4Q7Z404 712 aa17.65■□□□□ 0.42
MBD1-209ENST00000398495 NLGN1Q8N2Q7 840 aa17.65■□□□□ 0.42
MBD1-209ENST00000398495 OXER1Q8TDS5 423 aa17.65■□□□□ 0.42
MBD1-209ENST00000398495 ERCC4Q92889 916 aaPredicted RBP17.65■□□□□ 0.42
MBD1-209ENST00000398495 SAP30BPQ9UHR5 308 aaKnown RBP17.65■□□□□ 0.42
MBD1-209ENST00000398495 A0A087WWV3 80 aa17.64■□□□□ 0.42
MBD1-209ENST00000398495 TOB1P50616 345 aaPredicted RBP17.64■□□□□ 0.42
MBD1-209ENST00000398495 MFSD14BQ5SR56 506 aa17.64■□□□□ 0.42
MBD1-209ENST00000398495 RCSD1Q6JBY9 416 aa17.64■□□□□ 0.42
MBD1-209ENST00000398495 ATP6V0A2Q9Y487 856 aa17.64■□□□□ 0.42
MBD1-209ENST00000398495 CNTNAP5Q8WYK1 1306 aa17.64■□□□□ 0.42
MBD1-209ENST00000398495 PRPF3O43395 683 aaKnown RBP17.64■□□□□ 0.41
MBD1-209ENST00000398495 PPP6R2O75170 966 aa17.64■□□□□ 0.41
MBD1-209ENST00000398495 CMA1P23946 247 aa17.64■□□□□ 0.41
MBD1-209ENST00000398495 HMGB2P26583 209 aaKnown RBP17.64■□□□□ 0.41
MBD1-209ENST00000398495 AKAP17AQ02040 695 aaKnown RBP17.64■□□□□ 0.41
MBD1-209ENST00000398495 NR5A1Q13285 461 aa17.64■□□□□ 0.41
MBD1-209ENST00000398495 STX1AQ16623 288 aa17.64■□□□□ 0.41
MBD1-209ENST00000398495 FOXP1Q9H334 677 aaPredicted RBP17.64■□□□□ 0.41
MBD1-209ENST00000398495 VPS54Q9P1Q0 977 aa17.64■□□□□ 0.41
MBD1-209ENST00000398495 GPR75-ASB3A0A0A6YYF3 556 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 RIMBP2O15034 1052 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 SRGNP10124 158 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 TFAP4Q01664 338 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 MPNDQ8N594 471 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 SLC44A5Q8NCS7 719 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 V9GY48 417 aaPredicted RBP17.63■□□□□ 0.41
MBD1-209ENST00000398495 FAM205AQ6ZU69 1335 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 MMP10P09238 476 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 NPR1P16066 1061 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 MSNP26038 577 aaKnown RBP17.63■□□□□ 0.41
MBD1-209ENST00000398495 ZNF165P49910 485 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 MSL1Q68DK7 614 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 SHC4Q6S5L8 630 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 CLIC6Q96NY7 704 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 IL17RBQ9NRM6 502 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 ZKSCAN5Q9Y2L8 839 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 FOCADQ5VW36 1801 aa17.63■□□□□ 0.41
MBD1-209ENST00000398495 PLCD1P51178 756 aa17.62■□□□□ 0.41
MBD1-209ENST00000398495 TEX11Q8IYF3 940 aa17.62■□□□□ 0.41
MBD1-209ENST00000398495 SRBD1Q8N5C6 995 aaKnown RBP17.62■□□□□ 0.41
MBD1-209ENST00000398495 JMYQ8N9B5 988 aa17.62■□□□□ 0.41
MBD1-209ENST00000398495 QSER1Q2KHR3 1735 aa17.62■□□□□ 0.41
MBD1-209ENST00000398495 GAKO14976 1311 aa17.62■□□□□ 0.41
MBD1-209ENST00000398495 MYH1P12882 1939 aa17.62■□□□□ 0.41
MBD1-209ENST00000398495 CTCFLQ8NI51 663 aaPredicted RBP17.62■□□□□ 0.41
MBD1-209ENST00000398495 TBC1D22AQ8WUA7 517 aa17.62■□□□□ 0.41
MBD1-209ENST00000398495 SDF4Q9BRK5 362 aa17.62■□□□□ 0.41
MBD1-209ENST00000398495 PHF20Q9BVI0 1012 aa17.62■□□□□ 0.41
MBD1-209ENST00000398495 FAM205CA6NFA0 338 aa17.61■□□□□ 0.41
MBD1-209ENST00000398495 ZNF202O95125 648 aa17.61■□□□□ 0.41
MBD1-209ENST00000398495 RHBDL3P58872 404 aa17.61■□□□□ 0.41
MBD1-209ENST00000398495 GTF2IP78347 998 aa17.61■□□□□ 0.41
MBD1-209ENST00000398495 AMOTL1Q8IY63 956 aa17.61■□□□□ 0.41
MBD1-209ENST00000398495 HPSEQ9Y251 543 aa17.61■□□□□ 0.41
MBD1-209ENST00000398495 PARP3Q9Y6F1 533 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms