RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 CDAN1Q8IWY9 1227 aa21.43■■□□□ 1.02
MBD1-208ENST00000398493 NSUN7Q8NE18 718 aaKnown RBP21.43■■□□□ 1.02
MBD1-208ENST00000398493 GDPD2Q9HCC8 539 aa21.43■■□□□ 1.02
MBD1-208ENST00000398493 CNTNAP1P78357 1384 aa21.42■■□□□ 1.02
MBD1-208ENST00000398493 GSG1L2A8MUP6 293 aa21.42■■□□□ 1.02
MBD1-208ENST00000398493 ADM5C9JUS6 153 aa21.42■■□□□ 1.02
MBD1-208ENST00000398493 TDO2P48775 406 aa21.42■■□□□ 1.02
MBD1-208ENST00000398493 UBE2HP62256 183 aa21.42■■□□□ 1.02
MBD1-208ENST00000398493 CDC37L1Q7L3B6 337 aa21.42■■□□□ 1.02
MBD1-208ENST00000398493 DCPSQ96C86 337 aaKnown RBP21.42■■□□□ 1.02
MBD1-208ENST00000398493 TMEM87BQ96K49 555 aa21.42■■□□□ 1.02
MBD1-208ENST00000398493 GLIS2Q9BZE0 524 aaPredicted RBP21.42■■□□□ 1.02
MBD1-208ENST00000398493 KRT23Q9C075 422 aa21.42■■□□□ 1.02
MBD1-208ENST00000398493 ZSCAN16Q9H4T2 348 aaPredicted RBP21.42■■□□□ 1.02
MBD1-208ENST00000398493 XRCC6P12956 609 aaKnown RBP eCLIP21.41■■□□□ 1.022e-6■■■■■ 29.9
MBD1-208ENST00000398493 PLCG2P16885 1265 aa21.41■■□□□ 1.02
MBD1-208ENST00000398493 DNM1Q05193 864 aaKnown RBP21.41■■□□□ 1.02
MBD1-208ENST00000398493 DDX11Q96FC9 970 aa21.41■■□□□ 1.02
MBD1-208ENST00000398493 TMEM39BQ9GZU3 492 aa21.41■■□□□ 1.02
MBD1-208ENST00000398493 DEFB129Q9H1M3 183 aa21.41■■□□□ 1.02
MBD1-208ENST00000398493 KLF18A0A0U1RQI7 1052 aa21.41■■□□□ 1.02
MBD1-208ENST00000398493 PTPDC1A2A3K4 754 aa21.41■■□□□ 1.02
MBD1-208ENST00000398493 DTNBO60941 627 aa21.41■■□□□ 1.02
MBD1-208ENST00000398493 FMR1Q06787 632 aaKnown RBP eCLIP21.41■■□□□ 1.02
MBD1-208ENST00000398493 RASA3Q14644 834 aa21.41■■□□□ 1.02
MBD1-208ENST00000398493 TMOD2Q9NZR1 351 aa21.41■■□□□ 1.02
MBD1-208ENST00000398493 MKRN1Q9UHC7 482 aaKnown RBP21.41■■□□□ 1.02
MBD1-208ENST00000398493 TCHHQ07283 1943 aa21.41■■□□□ 1.02
MBD1-208ENST00000398493 PITPNM2Q9BZ72 1349 aa21.41■■□□□ 1.02
MBD1-208ENST00000398493 POLR2AP24928 1970 aaKnown RBP21.4■■□□□ 1.02
MBD1-208ENST00000398493 FIBPO43427 364 aa21.4■■□□□ 1.02
MBD1-208ENST00000398493 ANTXR2P58335 489 aa21.4■■□□□ 1.02
MBD1-208ENST00000398493 SH3BP5LQ7L8J4 393 aa21.4■■□□□ 1.02
MBD1-208ENST00000398493 KRT26Q7Z3Y9 468 aa21.4■■□□□ 1.02
MBD1-208ENST00000398493 TBC1D10CQ8IV04 446 aa21.4■■□□□ 1.02
MBD1-208ENST00000398493 CRNKL1Q9BZJ0 848 aaKnown RBP21.4■■□□□ 1.02
MBD1-208ENST00000398493 NBPF3Q9H094 633 aa21.4■■□□□ 1.02
MBD1-208ENST00000398493 BRPF3Q9ULD4 1205 aa21.4■■□□□ 1.02
MBD1-208ENST00000398493 ANGEL1Q9UNK9 670 aaKnown RBP21.4■■□□□ 1.02
MBD1-208ENST00000398493 FLT1P17948 1338 aa21.4■■□□□ 1.02
MBD1-208ENST00000398493 FKBP1CQ5VVH2 108 aa21.39■■□□□ 1.02
MBD1-208ENST00000398493 MFSD6Q6ZSS7 791 aa21.39■■□□□ 1.02
MBD1-208ENST00000398493 APOBEC3FQ8IUX4 373 aaKnown RBP21.39■■□□□ 1.02
MBD1-208ENST00000398493 RNF41Q9H4P4 317 aaPredicted RBP21.39■■□□□ 1.02
MBD1-208ENST00000398493 EPB41L4AQ9HCS5 686 aaPredicted RBP21.39■■□□□ 1.02
MBD1-208ENST00000398493 DCP1AQ9NPI6 582 aaPredicted RBP21.39■■□□□ 1.02
MBD1-208ENST00000398493 TRAF5O00463 557 aa21.39■■□□□ 1.01
MBD1-208ENST00000398493 USP5P45974 858 aa21.39■■□□□ 1.01
MBD1-208ENST00000398493 EVX2Q03828 476 aa21.39■■□□□ 1.01
MBD1-208ENST00000398493 AKNAD1Q5T1N1 836 aa21.39■■□□□ 1.01
MBD1-208ENST00000398493 CHADLQ6NUI6 762 aa21.39■■□□□ 1.01
MBD1-208ENST00000398493 FERMT3Q86UX7 667 aa21.39■■□□□ 1.01
MBD1-208ENST00000398493 GAS2L3Q86XJ1 694 aa21.39■■□□□ 1.01
MBD1-208ENST00000398493 CERS3Q8IU89 383 aa21.39■■□□□ 1.01
MBD1-208ENST00000398493 SULF1Q8IWU6 871 aa21.39■■□□□ 1.01
MBD1-208ENST00000398493 SCAND2PQ9GZW5 306 aaPredicted RBP21.39■■□□□ 1.01
MBD1-208ENST00000398493 OSBPL5Q9H0X9 879 aaPredicted RBP21.39■■□□□ 1.01
MBD1-208ENST00000398493 TMEM63CQ9P1W3 806 aa21.39■■□□□ 1.01
MBD1-208ENST00000398493 DDTLA6NHG4 134 aaPredicted RBP21.38■■□□□ 1.01
MBD1-208ENST00000398493 GOLGA8BA8MQT2 603 aa21.38■■□□□ 1.01
MBD1-208ENST00000398493 CPLX1O14810 134 aa21.38■■□□□ 1.01
MBD1-208ENST00000398493 GADD45BO75293 160 aaPredicted RBP21.38■■□□□ 1.01
MBD1-208ENST00000398493 CTDNEP1O95476 244 aa21.38■■□□□ 1.01
MBD1-208ENST00000398493 SLURP2P0DP57 97 aa21.38■■□□□ 1.01
MBD1-208ENST00000398493 SLC4A8Q2Y0W8 1093 aa21.38■■□□□ 1.01
MBD1-208ENST00000398493 ECM29Q5VYK3 1845 aa21.38■■□□□ 1.01
MBD1-208ENST00000398493 FAM83AQ86UY5 434 aa21.38■■□□□ 1.01
MBD1-208ENST00000398493 FAM151AQ8WW52 585 aa21.38■■□□□ 1.01
MBD1-208ENST00000398493 TEPSINQ96N21 525 aa21.38■■□□□ 1.01
MBD1-208ENST00000398493 NCOA5Q9HCD5 579 aaKnown RBP21.38■■□□□ 1.01
MBD1-208ENST00000398493 RBM27Q9P2N5 1060 aaKnown RBP21.38■■□□□ 1.01
MBD1-208ENST00000398493 B4E1Z4 1266 aa21.37■■□□□ 1.01
MBD1-208ENST00000398493 SMIM22K7EJ46 135 aa21.37■■□□□ 1.01
MBD1-208ENST00000398493 ENTPD3O75355 529 aa21.37■■□□□ 1.01
MBD1-208ENST00000398493 STAG1Q8WVM7 1258 aa21.37■■□□□ 1.01
MBD1-208ENST00000398493 SAP30BPQ9UHR5 308 aaKnown RBP21.37■■□□□ 1.01
MBD1-208ENST00000398493 NPM3O75607 178 aaKnown RBP21.36■■□□□ 1.01
MBD1-208ENST00000398493 TOMM70O94826 608 aa21.36■■□□□ 1.01
MBD1-208ENST00000398493 LETM1O95202 739 aaPredicted RBP21.36■■□□□ 1.01
MBD1-208ENST00000398493 ITGBL1O95965 494 aaPredicted RBP21.36■■□□□ 1.01
MBD1-208ENST00000398493 CPLX2Q6PUV4 134 aaKnown RBP21.36■■□□□ 1.01
MBD1-208ENST00000398493 MTA3Q9BTC8 594 aa21.36■■□□□ 1.01
MBD1-208ENST00000398493 SH2B2O14492 632 aaPredicted RBP21.36■■□□□ 1.01
MBD1-208ENST00000398493 CTDSPL2Q05D32 466 aa21.36■■□□□ 1.01
MBD1-208ENST00000398493 TNFAIP1Q13829 316 aa21.36■■□□□ 1.01
MBD1-208ENST00000398493 SART3Q15020 963 aaKnown RBP21.36■■□□□ 1.01
MBD1-208ENST00000398493 NBPF12Q5TAG4 269 aaPredicted RBP21.36■■□□□ 1.01
MBD1-208ENST00000398493 CYB5R4Q7L1T6 521 aa21.36■■□□□ 1.01
MBD1-208ENST00000398493 GPHNQ9NQX3 736 aaPredicted RBP21.36■■□□□ 1.01
MBD1-208ENST00000398493 ELP1O95163 1332 aa21.35■■□□□ 1.01
MBD1-208ENST00000398493 TNNI2P48788 182 aa21.35■■□□□ 1.01
MBD1-208ENST00000398493 GIMAP6Q6P9H5 292 aa21.35■■□□□ 1.01
MBD1-208ENST00000398493 LRSAM1Q6UWE0 723 aa21.35■■□□□ 1.01
MBD1-208ENST00000398493 ATP8A2Q9NTI2 1148 aa21.35■■□□□ 1.01
MBD1-208ENST00000398493 CFAP45Q9UL16 551 aa21.35■■□□□ 1.01
MBD1-208ENST00000398493 CDK5RAP2Q96SN8 1893 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 CYP2D7A0A087X1C5 515 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 CDKL5O76039 1030 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 CYP2D6P10635 497 aa21.34■■□□□ 1.01
MBD1-208ENST00000398493 LIFRP42702 1097 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms