RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 OSBPL5Q9H0X9 879 aaPredicted RBP13.88□□□□□ -0.19
GTF2A2-202ENST00000396060 EHD4Q9H223 541 aa13.88□□□□□ -0.19
GTF2A2-202ENST00000396060 TAOK3Q9H2K8 898 aa13.88□□□□□ -0.19
GTF2A2-202ENST00000396060 DHX36Q9H2U1 1008 aaKnown RBP13.88□□□□□ -0.19
GTF2A2-202ENST00000396060 MKNK2Q9HBH9 465 aa13.88□□□□□ -0.19
GTF2A2-202ENST00000396060 DDX4Q9NQI0 724 aaKnown RBP13.88□□□□□ -0.19
GTF2A2-202ENST00000396060 ORC3Q9UBD5 711 aaPredicted RBP13.88□□□□□ -0.19
GTF2A2-202ENST00000396060 TSPY2A6NKD2 308 aa13.87□□□□□ -0.19
GTF2A2-202ENST00000396060 RESTQ13127 1097 aa13.87□□□□□ -0.19
GTF2A2-202ENST00000396060 KLHL40Q2TBA0 621 aa13.87□□□□□ -0.19
GTF2A2-202ENST00000396060 FOXD4L5Q5VV16 416 aaPredicted RBP13.87□□□□□ -0.19
GTF2A2-202ENST00000396060 MICU3Q86XE3 530 aa13.87□□□□□ -0.19
GTF2A2-202ENST00000396060 NIM1KQ8IY84 436 aa13.87□□□□□ -0.19
GTF2A2-202ENST00000396060 FBXO18Q8NFZ0 1043 aa13.87□□□□□ -0.19
GTF2A2-202ENST00000396060 FOXD4L4Q8WXT5 416 aaPredicted RBP13.87□□□□□ -0.19
GTF2A2-202ENST00000396060 IL17RBQ9NRM6 502 aa13.87□□□□□ -0.19
GTF2A2-202ENST00000396060 RBM28Q9NW13 759 aaKnown RBP13.87□□□□□ -0.19
GTF2A2-202ENST00000396060 SWAP70Q9UH65 585 aa13.87□□□□□ -0.19
GTF2A2-202ENST00000396060 SAP30BPQ9UHR5 308 aaKnown RBP13.87□□□□□ -0.19
GTF2A2-202ENST00000396060 COL4A5P29400 1685 aa13.86□□□□□ -0.19
GTF2A2-202ENST00000396060 COL2A1P02458 1487 aaPredicted RBP13.86□□□□□ -0.19
GTF2A2-202ENST00000396060 ECM29Q5VYK3 1845 aa13.86□□□□□ -0.19
GTF2A2-202ENST00000396060 H3BQV1 296 aa13.86□□□□□ -0.19
GTF2A2-202ENST00000396060 ENTPD3O75355 529 aa13.86□□□□□ -0.19
GTF2A2-202ENST00000396060 FMNL1O95466 1100 aaPredicted RBP13.86□□□□□ -0.19
GTF2A2-202ENST00000396060 FAM47AQ5JRC9 791 aa13.86□□□□□ -0.19
GTF2A2-202ENST00000396060 IFFO2Q5TF58 517 aa13.86□□□□□ -0.19
GTF2A2-202ENST00000396060 ATL3Q6DD88 541 aa13.86□□□□□ -0.19
GTF2A2-202ENST00000396060 NBPF11Q86T75 865 aa13.86□□□□□ -0.19
GTF2A2-202ENST00000396060 METTL16Q86W50 562 aaKnown RBP13.86□□□□□ -0.19
GTF2A2-202ENST00000396060 CRACR2BQ8N4Y2 399 aaPredicted RBP13.86□□□□□ -0.19
GTF2A2-202ENST00000396060 PLIN4Q96Q06 1357 aa13.86□□□□□ -0.19
GTF2A2-202ENST00000396060 NFKBIEO00221 500 aa13.85□□□□□ -0.19
GTF2A2-202ENST00000396060 PSMD14O00487 310 aa13.85□□□□□ -0.19
GTF2A2-202ENST00000396060 DTNBO60941 627 aa13.85□□□□□ -0.19
GTF2A2-202ENST00000396060 PRPF40AO75400 957 aaKnown RBP13.85□□□□□ -0.19
GTF2A2-202ENST00000396060 CSPP1Q1MSJ5 1256 aa13.85□□□□□ -0.19
GTF2A2-202ENST00000396060 WASF1Q92558 559 aa13.85□□□□□ -0.19
GTF2A2-202ENST00000396060 HDAC9Q9UKV0 1011 aa13.85□□□□□ -0.19
GTF2A2-202ENST00000396060 TCHHQ07283 1943 aa13.85□□□□□ -0.19
GTF2A2-202ENST00000396060 PSDA5PKW4 1024 aaPredicted RBP13.84□□□□□ -0.19
GTF2A2-202ENST00000396060 TSPY3P0CV98 308 aa13.84□□□□□ -0.19
GTF2A2-202ENST00000396060 TSPY8P0CW00 308 aa13.84□□□□□ -0.19
GTF2A2-202ENST00000396060 SSRP1Q08945 709 aaKnown RBP13.84□□□□□ -0.19
GTF2A2-202ENST00000396060 FUT2Q10981 343 aa13.84□□□□□ -0.19
GTF2A2-202ENST00000396060 CFAP100Q494V2 611 aa13.84□□□□□ -0.19
GTF2A2-202ENST00000396060 FKBP1CQ5VVH2 108 aa13.84□□□□□ -0.19
GTF2A2-202ENST00000396060 RAB11FIP4Q86YS3 637 aa13.84□□□□□ -0.19
GTF2A2-202ENST00000396060 FOXP4Q8IVH2 680 aaPredicted RBP13.84□□□□□ -0.19
GTF2A2-202ENST00000396060 C8orf76Q96K31 380 aa13.84□□□□□ -0.19
GTF2A2-202ENST00000396060 MYL10Q9BUA6 226 aa13.84□□□□□ -0.19
GTF2A2-202ENST00000396060 FAM198AQ9UFP1 575 aa13.84□□□□□ -0.19
GTF2A2-202ENST00000396060 SERPINB13Q9UIV8 391 aa13.84□□□□□ -0.19
GTF2A2-202ENST00000396060 HLA-DOAP06340 250 aa13.83□□□□□ -0.19
GTF2A2-202ENST00000396060 RXRAP19793 462 aa13.83□□□□□ -0.19
GTF2A2-202ENST00000396060 CXCL9Q07325 125 aa13.83□□□□□ -0.19
GTF2A2-202ENST00000396060 NFIAQ12857 509 aa13.83□□□□□ -0.19
GTF2A2-202ENST00000396060 USP48Q86UV5 1035 aa13.83□□□□□ -0.19
GTF2A2-202ENST00000396060 SLC44A5Q8NCS7 719 aa13.83□□□□□ -0.19
GTF2A2-202ENST00000396060 ZBED3Q96IU2 234 aaPredicted RBP13.83□□□□□ -0.19
GTF2A2-202ENST00000396060 RNF26Q9BY78 433 aaPredicted RBP13.83□□□□□ -0.19
GTF2A2-202ENST00000396060 SPON1Q9HCB6 807 aa13.83□□□□□ -0.19
GTF2A2-202ENST00000396060 ELP1O95163 1332 aa13.83□□□□□ -0.19
GTF2A2-202ENST00000396060 ATRNL1Q5VV63 1379 aa13.83□□□□□ -0.19
GTF2A2-202ENST00000396060 ARFGEF1Q9Y6D6 1849 aa13.83□□□□□ -0.19
GTF2A2-202ENST00000396060 IGKV6D-41A0A0C4DH26 115 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 SPDYE2BA6NHP3 402 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 PRPF3O43395 683 aaKnown RBP13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 NMT2O60551 498 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 RAD17O75943 681 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 DEXIO95424 95 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 MBD3O95983 291 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 SPDYE6P0CI01 402 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 KRT85P78386 507 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 DNM1Q05193 864 aaKnown RBP13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 PICALMQ13492 652 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 TNIP1Q15025 636 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 TRIM22Q8IYM9 498 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 OGFOD1Q8N543 542 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 JDP2Q8WYK2 163 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 CHAMP1Q96JM3 812 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 PRMT6Q96LA8 375 aaPredicted RBP13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 CCDC17Q96LX7 622 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 SCAND2PQ9GZW5 306 aaPredicted RBP13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 PI4KBQ9UBF8 816 aa13.83□□□□□ -0.2
GTF2A2-202ENST00000396060 ADAMTSL1Q8N6G6 1762 aa13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 RPS12P25398 132 aaKnown RBP13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 KIF5BP33176 963 aa13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 RBM5P52756 815 aaKnown RBP eCLIP13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 PPP4R3BQ5MIZ7 849 aa13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 CIAPIN1Q6FI81 312 aa13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 TMTC3Q6ZXV5 915 aa13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 BRAPQ7Z569 592 aa13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 FERMT3Q86UX7 667 aa13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 CCDC144CPQ8IYA2 1237 aa13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 NUP133Q8WUM0 1156 aa13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 ALG1Q9BT22 464 aa13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 KAT14Q9H8E8 782 aa13.82□□□□□ -0.2
GTF2A2-202ENST00000396060 CNPY2Q9Y2B0 182 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms