RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 PLCD1P51178 756 aa17.92■□□□□ 0.46
SHANK1-204ENST00000391814 LETM2Q2VYF4 491 aa17.92■□□□□ 0.46
SHANK1-204ENST00000391814 FAM227BQ96M60 508 aa17.92■□□□□ 0.46
SHANK1-204ENST00000391814 PFDN4Q9NQP4 134 aa17.92■□□□□ 0.46
SHANK1-204ENST00000391814 POLKQ9UBT6 870 aa17.92■□□□□ 0.46
SHANK1-204ENST00000391814 ZBTB12Q9Y330 459 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-204ENST00000391814 SATB1Q01826 763 aa17.92■□□□□ 0.46
SHANK1-204ENST00000391814 HS2ST1Q7LGA3 356 aa17.92■□□□□ 0.46
SHANK1-204ENST00000391814 CXorf38Q8TB03 319 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 DPH5Q9H2P9 285 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 DBN1Q16643 649 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 FAM133BQ5BKY9 247 aaKnown RBP17.91■□□□□ 0.46
SHANK1-204ENST00000391814 RRAGAQ7L523 313 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 SBNO1A3KN83 1393 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 GAS8O95995 478 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 RILPL1Q5EBL4 403 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 CTTNBP2NLQ9P2B4 639 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 RPL13P26373 211 aaKnown RBP17.91■□□□□ 0.46
SHANK1-204ENST00000391814 LMBR1LQ6UX01 489 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 HDAC9Q9UKV0 1011 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 USTQ9Y2C2 406 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 KCNK3O14649 394 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 CLCN6P51797 869 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 GSTO1P78417 241 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 UHMK1Q8TAS1 419 aaKnown RBP17.91■□□□□ 0.46
SHANK1-204ENST00000391814 HYOU1Q9Y4L1 999 aa17.91■□□□□ 0.46
SHANK1-204ENST00000391814 B4E1Z4 1266 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 ZMYND10O75800 440 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 GYS2P54840 703 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 PARP2Q9UGN5 583 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 SERTAD1Q9UHV2 236 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 HLA-DOAP06340 250 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 PPP1R2P41236 205 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 SNX16P57768 344 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 NBPF14Q5TI25 921 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 TCP11Q8WWU5 503 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 TBC1D7Q9P0N9 293 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 MYO1AQ9UBC5 1043 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 RAD51AP2Q09MP3 1159 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 C2CD5Q86YS7 1000 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 TEX11Q8IYF3 940 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 RAPGEF3O95398 923 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 ATP8B1O43520 1251 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 ETF1P62495 437 aaKnown RBP17.9■□□□□ 0.46
SHANK1-204ENST00000391814 KLHL30Q0D2K2 578 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 SRGAP1Q7Z6B7 1085 aa17.9■□□□□ 0.46
SHANK1-204ENST00000391814 ME3Q16798 604 aa17.89■□□□□ 0.46
SHANK1-204ENST00000391814 CWF19L2Q2TBE0 894 aaKnown RBP17.89■□□□□ 0.46
SHANK1-204ENST00000391814 TRIM58Q8NG06 486 aa17.89■□□□□ 0.46
SHANK1-204ENST00000391814 CDC5LQ99459 802 aaKnown RBP17.89■□□□□ 0.46
SHANK1-204ENST00000391814 WASLO00401 505 aaPredicted RBP17.89■□□□□ 0.45
SHANK1-204ENST00000391814 KRIT1O00522 736 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 ALDH1L1O75891 902 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 IL15P40933 162 aaPredicted RBP17.89■□□□□ 0.45
SHANK1-204ENST00000391814 IRX4P78413 519 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 CCDC197Q8NCU1 140 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 MRFAP1Q9Y605 127 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 SPECC1L-ADORA2AF8WAN1 911 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 SERPINB6P35237 376 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 TAF11Q15544 211 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 Q9H521 79 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 FAM207AQ9NSI2 230 aaPredicted RBP17.89■□□□□ 0.45
SHANK1-204ENST00000391814 KCNJ18B7U540 433 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 KCNJ12Q14500 433 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 NAA16Q6N069 864 aaPredicted RBP17.89■□□□□ 0.45
SHANK1-204ENST00000391814 RABGGTAQ92696 567 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 STAMQ92783 540 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 CCDC51Q96ER9 411 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 C2orf54Q08AI8 447 aa17.89■□□□□ 0.45
SHANK1-204ENST00000391814 LARSQ9P2J5 1176 aaKnown RBP17.89■□□□□ 0.45
SHANK1-204ENST00000391814 DEXIO95424 95 aa17.88■□□□□ 0.45
SHANK1-204ENST00000391814 LDHCP07864 332 aa17.88■□□□□ 0.45
SHANK1-204ENST00000391814 PICALMQ13492 652 aa17.88■□□□□ 0.45
SHANK1-204ENST00000391814 KSR2Q6VAB6 950 aa17.88■□□□□ 0.45
SHANK1-204ENST00000391814 CFAP61Q8NHU2 1237 aa17.88■□□□□ 0.45
SHANK1-204ENST00000391814 LSM14BQ9BX40 385 aaKnown RBP17.88■□□□□ 0.45
SHANK1-204ENST00000391814 XAB2Q9HCS7 855 aaKnown RBP17.88■□□□□ 0.45
SHANK1-204ENST00000391814 POLR3AO14802 1390 aaPredicted RBP17.88■□□□□ 0.45
SHANK1-204ENST00000391814 PTPN21Q16825 1174 aa17.88■□□□□ 0.45
SHANK1-204ENST00000391814 GRIN2BQ13224 1484 aa17.88■□□□□ 0.45
SHANK1-204ENST00000391814 PFKFB1P16118 471 aa17.88■□□□□ 0.45
SHANK1-204ENST00000391814 COPS6Q7L5N1 327 aa17.88■□□□□ 0.45
SHANK1-204ENST00000391814 GNAT2P19087 354 aa17.88■□□□□ 0.45
SHANK1-204ENST00000391814 PHKBQ93100 1093 aa17.88■□□□□ 0.45
SHANK1-204ENST00000391814 KIAA1468Q9P260 1216 aa17.88■□□□□ 0.45
SHANK1-204ENST00000391814 MORC3Q14149 939 aa17.87■□□□□ 0.45
SHANK1-204ENST00000391814 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.87■□□□□ 0.45
SHANK1-204ENST00000391814 SNRPA1P09661 255 aaKnown RBP17.87■□□□□ 0.45
SHANK1-204ENST00000391814 TTC38Q5R3I4 469 aa17.87■□□□□ 0.45
SHANK1-204ENST00000391814 THEMISQ8N1K5 641 aaPredicted RBP17.87■□□□□ 0.45
SHANK1-204ENST00000391814 KIFC2Q96AC6 838 aa17.87■□□□□ 0.45
SHANK1-204ENST00000391814 PSDA5PKW4 1024 aaPredicted RBP17.87■□□□□ 0.45
SHANK1-204ENST00000391814 TERF2Q15554 542 aa17.87■□□□□ 0.45
SHANK1-204ENST00000391814 DYMQ7RTS9 669 aa17.87■□□□□ 0.45
SHANK1-204ENST00000391814 PHLPP2Q6ZVD8 1323 aa17.87■□□□□ 0.45
SHANK1-204ENST00000391814 ENC1O14682 589 aa17.87■□□□□ 0.45
SHANK1-204ENST00000391814 MSANTD4Q8NCY6 345 aa17.87■□□□□ 0.45
SHANK1-204ENST00000391814 LIN9Q5TKA1 542 aa17.86■□□□□ 0.45
SHANK1-204ENST00000391814 ADAT2Q7Z6V5 191 aaKnown RBP17.86■□□□□ 0.45
SHANK1-204ENST00000391814 ANKRD65E5RJM6 399 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms