RNA–Protein interactions for RNA: ENST00000384475.1

RNU6-393P-201, Transcript of RNA, U6 small nuclear 393, pseudogene, humanhuman

BASIC

Gene RNU6-393P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-393P-201ENST00000384475 FAM214BQ7L5A3 538 aa4.93□□□□□ -1.62
RNU6-393P-201ENST00000384475 REXO1Q8N1G1 1221 aaKnown RBP4.93□□□□□ -1.62
RNU6-393P-201ENST00000384475 TMEM87BQ96K49 555 aa4.93□□□□□ -1.62
RNU6-393P-201ENST00000384475 METTL22Q9BUU2 404 aaPredicted RBP4.93□□□□□ -1.62
RNU6-393P-201ENST00000384475 EHMT1Q9H9B1 1298 aa4.93□□□□□ -1.62
RNU6-393P-201ENST00000384475 PRDM10Q9NQV6 1147 aa4.93□□□□□ -1.62
RNU6-393P-201ENST00000384475 REV1Q9UBZ9 1251 aa4.93□□□□□ -1.62
RNU6-393P-201ENST00000384475 UPK3BL1B0FP48 263 aa4.92□□□□□ -1.62
RNU6-393P-201ENST00000384475 UPK3BL2E5RIL1 263 aa4.92□□□□□ -1.62
RNU6-393P-201ENST00000384475 TGFB1P01137 390 aa4.92□□□□□ -1.62
RNU6-393P-201ENST00000384475 ERCC5P28715 1186 aaPredicted RBP4.92□□□□□ -1.62
RNU6-393P-201ENST00000384475 CYP27C1Q4G0S4 372 aa4.92□□□□□ -1.62
RNU6-393P-201ENST00000384475 PRAMEF13Q5VWM6 474 aa4.92□□□□□ -1.62
RNU6-393P-201ENST00000384475 TOP6BLQ8N6T0 577 aa4.92□□□□□ -1.62
RNU6-393P-201ENST00000384475 MFSD2AQ8NA29 543 aa4.92□□□□□ -1.62
RNU6-393P-201ENST00000384475 ACBD3Q9H3P7 528 aa4.92□□□□□ -1.62
RNU6-393P-201ENST00000384475 PIM2Q9P1W9 311 aa4.92□□□□□ -1.62
RNU6-393P-201ENST00000384475 LEMD3Q9Y2U8 911 aa4.92□□□□□ -1.62
RNU6-393P-201ENST00000384475 PCDHB14Q9Y5E9 798 aa4.92□□□□□ -1.62
RNU6-393P-201ENST00000384475 CHURC1-FNTBB4DL54 471 aa4.91□□□□□ -1.62
RNU6-393P-201ENST00000384475 SLITRK5O94991 958 aa4.91□□□□□ -1.62
RNU6-393P-201ENST00000384475 EOMESO95936 686 aa4.91□□□□□ -1.62
RNU6-393P-201ENST00000384475 FOSL1P15407 271 aa4.91□□□□□ -1.62
RNU6-393P-201ENST00000384475 MCM4P33991 863 aa4.91□□□□□ -1.62
RNU6-393P-201ENST00000384475 GJA8P48165 433 aa4.91□□□□□ -1.62
RNU6-393P-201ENST00000384475 ZNF165P49910 485 aa4.91□□□□□ -1.62
RNU6-393P-201ENST00000384475 CLCQ05315 142 aa4.91□□□□□ -1.62
RNU6-393P-201ENST00000384475 GK5Q6ZS86 529 aa4.91□□□□□ -1.62
RNU6-393P-201ENST00000384475 RIN3Q8TB24 985 aa4.91□□□□□ -1.62
RNU6-393P-201ENST00000384475 RASGRP4Q8TDF6 673 aa4.91□□□□□ -1.62
RNU6-393P-201ENST00000384475 SLC22A31A6NKX4 558 aa4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 CYP26A1O43174 497 aa4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 DNAJA2O60884 412 aa4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 COBLO75128 1261 aa4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 MED26O95402 600 aa4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 HOXA10P31260 410 aaPredicted RBP4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 YARSP54577 528 aaKnown RBP4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 ZMYM1Q5SVZ6 1142 aa4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 LETMD1Q6P1Q0 360 aa4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 INTS5Q6P9B9 1019 aaKnown RBP4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 SLFN12Q8IYM2 578 aa4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 FAM13CQ8NE31 585 aa4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 XAGE3Q8WTP9 111 aa4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 GPRASP2Q96D09 838 aa4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 SPATA32Q96LK8 384 aa4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 HEXIM2Q96MH2 286 aaKnown RBP4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 DPH2Q9BQC3 489 aaPredicted RBP4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 CCSER2Q9H7U1 834 aa4.9□□□□□ -1.63
RNU6-393P-201ENST00000384475 IGF2BP3O00425 579 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU6-393P-201ENST00000384475 GRIK1P39086 918 aa4.89□□□□□ -1.63
RNU6-393P-201ENST00000384475 TNNI2P48788 182 aa4.89□□□□□ -1.63
RNU6-393P-201ENST00000384475 COL9A2Q14055 689 aaPredicted RBP4.89□□□□□ -1.63
RNU6-393P-201ENST00000384475 MLECQ14165 292 aa4.89□□□□□ -1.63
RNU6-393P-201ENST00000384475 MIPEPQ99797 713 aa4.89□□□□□ -1.63
RNU6-393P-201ENST00000384475 LRRC4CQ9HCJ2 640 aa4.89□□□□□ -1.63
RNU6-393P-201ENST00000384475 GINM1Q9NU53 330 aa4.89□□□□□ -1.63
RNU6-393P-201ENST00000384475 KLHL3Q9UH77 587 aa4.89□□□□□ -1.63
RNU6-393P-201ENST00000384475 INPP5FQ9Y2H2 1132 aa4.89□□□□□ -1.63
RNU6-393P-201ENST00000384475 CNTNAP4Q9C0A0 1308 aa4.89□□□□□ -1.63
RNU6-393P-201ENST00000384475 SSTR4P31391 388 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 SOX9P48436 509 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 CD97P48960 835 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 OXCT1P55809 520 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 LRRFIP1Q32MZ4 808 aaKnown RBP4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 CDCP2Q5VXM1 449 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 CDH24Q86UP0 819 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 DNAJB8Q8NHS0 232 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 PPP1R13LQ8WUF5 828 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 CYB5D2Q8WUJ1 264 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 CCDC74BQ96LY2 380 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 ANTXR1Q9H6X2 564 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 MKNK2Q9HBH9 465 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 GMIPQ9P107 970 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 ZC3H7BQ9UGR2 993 aaKnown RBP4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 GTF2IRD1Q9UHL9 959 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 ZNRF3Q9ULT6 936 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 CEP131Q9UPN4 1083 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 EFR3BQ9Y2G0 817 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 U3KQE9 123 aa4.88□□□□□ -1.63
RNU6-393P-201ENST00000384475 IMPDH2P12268 514 aa4.87□□□□□ -1.63
RNU6-393P-201ENST00000384475 MSMPQ1L6U9 139 aa4.87□□□□□ -1.63
RNU6-393P-201ENST00000384475 ARSHQ5FYA8 562 aa4.87□□□□□ -1.63
RNU6-393P-201ENST00000384475 FAM181AQ8N9Y4 354 aa4.87□□□□□ -1.63
RNU6-393P-201ENST00000384475 ATG4CQ96DT6 458 aa4.87□□□□□ -1.63
RNU6-393P-201ENST00000384475 SEC16BQ96JE7 1060 aa4.87□□□□□ -1.63
RNU6-393P-201ENST00000384475 CNNM2Q9H8M5 875 aa4.87□□□□□ -1.63
RNU6-393P-201ENST00000384475 PRDM5Q9NQX1 630 aaPredicted RBP4.87□□□□□ -1.63
RNU6-393P-201ENST00000384475 TPX2Q9ULW0 747 aaKnown RBP4.87□□□□□ -1.63
RNU6-393P-201ENST00000384475 PPT2Q9UMR5 302 aa4.87□□□□□ -1.63
RNU6-393P-201ENST00000384475 MEIS3P2A8K0S8 358 aa4.86□□□□□ -1.63
RNU6-393P-201ENST00000384475 KIAA1324LA8MWY0 1029 aaPredicted RBP4.86□□□□□ -1.63
RNU6-393P-201ENST00000384475 RBAK-RBAKDNI3L0D1 243 aa4.86□□□□□ -1.63
RNU6-393P-201ENST00000384475 RGS13O14921 159 aa4.86□□□□□ -1.63
RNU6-393P-201ENST00000384475 HYAL3O43820 417 aaPredicted RBP4.86□□□□□ -1.63
RNU6-393P-201ENST00000384475 NME1P15531 152 aaKnown RBP4.86□□□□□ -1.63
RNU6-393P-201ENST00000384475 SPINK2P20155 84 aa4.86□□□□□ -1.63
RNU6-393P-201ENST00000384475 ETV3P41162 512 aa4.86□□□□□ -1.63
RNU6-393P-201ENST00000384475 LRP8Q14114 963 aa4.86□□□□□ -1.63
RNU6-393P-201ENST00000384475 SFRP5Q5T4F7 317 aa4.86□□□□□ -1.63
RNU6-393P-201ENST00000384475 ARTNQ5T4W7 220 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms