RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 GPHNQ9NQX3 736 aaPredicted RBP16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 RBM28Q9NW13 759 aaKnown RBP16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 DAGLAQ9Y4D2 1042 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 TACC3Q9Y6A5 838 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 TNKSO95271 1327 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 MYO3BQ8WXR4 1341 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 USP17L3A6NCW0 530 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 USP17L4A6NCW7 530 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 ECE2O60344 883 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 GRIK5Q16478 980 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 DOK7Q18PE1 504 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 USP17L1Q7RTZ2 530 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 CATIPQ7Z7H3 387 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 TGFBRAP1Q8WUH2 860 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 DDX11Q96FC9 970 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 TCP11L1Q9NUJ3 509 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 ORC3Q9UBD5 711 aaPredicted RBP16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 TTF2Q9UNY4 1162 aaKnown RBP16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 MYH15Q9Y2K3 1946 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 ELP1O95163 1332 aa16.07■□□□□ 0.16
TNFSF13-203ENST00000380535 ZNF646O15015 1829 aaPredicted RBP16.06■□□□□ 0.16
TNFSF13-203ENST00000380535 RHBDL3P58872 404 aa16.06■□□□□ 0.16
TNFSF13-203ENST00000380535 UBE2HP62256 183 aa16.06■□□□□ 0.16
TNFSF13-203ENST00000380535 IFIT1BQ5T764 474 aaKnown RBP16.06■□□□□ 0.16
TNFSF13-203ENST00000380535 TRIM22Q8IYM9 498 aa16.06■□□□□ 0.16
TNFSF13-203ENST00000380535 GPATCH11Q8N954 259 aa16.06■□□□□ 0.16
TNFSF13-203ENST00000380535 CFAP45Q9UL16 551 aa16.06■□□□□ 0.16
TNFSF13-203ENST00000380535 ECM29Q5VYK3 1845 aa16.06■□□□□ 0.16
TNFSF13-203ENST00000380535 IFNAR1P17181 557 aa16.06■□□□□ 0.16
TNFSF13-203ENST00000380535 RTN1Q16799 776 aa16.06■□□□□ 0.16
TNFSF13-203ENST00000380535 TTC6Q86TZ1 520 aa16.06■□□□□ 0.16
TNFSF13-203ENST00000380535 ZNF654Q8IZM8 581 aa16.06■□□□□ 0.16
TNFSF13-203ENST00000380535 C8orf76Q96K31 380 aa16.06■□□□□ 0.16
TNFSF13-203ENST00000380535 RBSNQ9H1K0 784 aa16.06■□□□□ 0.16
TNFSF13-203ENST00000380535 FIBPO43427 364 aa16.05■□□□□ 0.16
TNFSF13-203ENST00000380535 IARSP41252 1262 aaKnown RBP16.05■□□□□ 0.16
TNFSF13-203ENST00000380535 LRSAM1Q6UWE0 723 aa16.05■□□□□ 0.16
TNFSF13-203ENST00000380535 OLFM4Q6UX06 510 aa16.05■□□□□ 0.16
TNFSF13-203ENST00000380535 FERMT3Q86UX7 667 aa16.05■□□□□ 0.16
TNFSF13-203ENST00000380535 MICU3Q86XE3 530 aa16.05■□□□□ 0.16
TNFSF13-203ENST00000380535 DGKHQ86XP1 1220 aa16.05■□□□□ 0.16
TNFSF13-203ENST00000380535 ANKS1AQ92625 1134 aa16.05■□□□□ 0.16
TNFSF13-203ENST00000380535 ZNF396Q96N95 335 aaPredicted RBP16.05■□□□□ 0.16
TNFSF13-203ENST00000380535 MAP3K14Q99558 947 aa16.05■□□□□ 0.16
TNFSF13-203ENST00000380535 MKNK2Q9HBH9 465 aa16.05■□□□□ 0.16
TNFSF13-203ENST00000380535 FLT1P17948 1338 aa16.05■□□□□ 0.16
TNFSF13-203ENST00000380535 TSPY2A6NKD2 308 aa16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 NPM3O75607 178 aaKnown RBP16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 USP17L8P0C7I0 530 aa16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 SSRP1Q08945 709 aaKnown RBP16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 RESTQ13127 1097 aa16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 DACT2Q5SW24 774 aa16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 ZNF444Q8N0Y2 327 aaPredicted RBP16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 ZNF526Q8TF50 670 aaPredicted RBP16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 ZDHHC15Q96MV8 337 aa16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 PDCL3Q9H2J4 239 aa16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 INCENPQ9NQS7 918 aa16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 CYP2D7A0A087X1C5 515 aa16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 C16orf86Q6ZW13 317 aa16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 BRAPQ7Z569 592 aa16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 CERS5Q8N5B7 392 aa16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 ENAHQ8N8S7 591 aaPredicted RBP16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 FANCBQ8NB91 859 aa16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 PIM2Q9P1W9 311 aa16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 SERPINA10Q9UK55 444 aa16.04■□□□□ 0.16
TNFSF13-203ENST00000380535 PPIP5K2O43314 1243 aa16.03■□□□□ 0.16
TNFSF13-203ENST00000380535 FMNL1O95466 1100 aaPredicted RBP16.03■□□□□ 0.16
TNFSF13-203ENST00000380535 FDPSP14324 419 aaKnown RBP16.03■□□□□ 0.16
TNFSF13-203ENST00000380535 TRIM29Q14134 588 aa16.03■□□□□ 0.16
TNFSF13-203ENST00000380535 PPP4R3BQ5MIZ7 849 aa16.03■□□□□ 0.16
TNFSF13-203ENST00000380535 FBXO18Q8NFZ0 1043 aa16.03■□□□□ 0.16
TNFSF13-203ENST00000380535 DBNDD1Q9H9R9 158 aa16.03■□□□□ 0.16
TNFSF13-203ENST00000380535 C21orf2O43822 256 aa16.03■□□□□ 0.16
TNFSF13-203ENST00000380535 DPEP1P16444 411 aa16.03■□□□□ 0.16
TNFSF13-203ENST00000380535 NTRK3Q16288 839 aa16.03■□□□□ 0.16
TNFSF13-203ENST00000380535 MAPKAPK5Q8IW41 473 aa16.03■□□□□ 0.16
TNFSF13-203ENST00000380535 SWAP70Q9UH65 585 aa16.03■□□□□ 0.16
TNFSF13-203ENST00000380535 SYCE3A1L190 88 aa16.02■□□□□ 0.16
TNFSF13-203ENST00000380535 KIF5BP33176 963 aa16.02■□□□□ 0.16
TNFSF13-203ENST00000380535 CRKP46108 304 aa16.02■□□□□ 0.16
TNFSF13-203ENST00000380535 ZKSCAN3Q9BRR0 538 aa16.02■□□□□ 0.16
TNFSF13-203ENST00000380535 DEXIO95424 95 aa16.02■□□□□ 0.15
TNFSF13-203ENST00000380535 CYP2D6P10635 497 aa16.02■□□□□ 0.15
TNFSF13-203ENST00000380535 ADD1P35611 737 aaKnown RBP16.02■□□□□ 0.15
TNFSF13-203ENST00000380535 AOC3Q16853 763 aa16.02■□□□□ 0.15
TNFSF13-203ENST00000380535 FAM173BQ6P4H8 233 aa16.02■□□□□ 0.15
TNFSF13-203ENST00000380535 NKX2-3Q8TAU0 364 aa16.02■□□□□ 0.15
TNFSF13-203ENST00000380535 RNF26Q9BY78 433 aaPredicted RBP16.02■□□□□ 0.15
TNFSF13-203ENST00000380535 PDGFDQ9GZP0 370 aaPredicted RBP16.02■□□□□ 0.15
TNFSF13-203ENST00000380535 USP40Q9NVE5 1235 aa16.02■□□□□ 0.15
TNFSF13-203ENST00000380535 HLA-DOAP06340 250 aa16.01■□□□□ 0.15
TNFSF13-203ENST00000380535 TSPY3P0CV98 308 aa16.01■□□□□ 0.15
TNFSF13-203ENST00000380535 TSPY8P0CW00 308 aa16.01■□□□□ 0.15
TNFSF13-203ENST00000380535 XBP1P17861 261 aa16.01■□□□□ 0.15
TNFSF13-203ENST00000380535 KCNA3P22001 575 aa16.01■□□□□ 0.15
TNFSF13-203ENST00000380535 CDC27P30260 824 aa16.01■□□□□ 0.15
TNFSF13-203ENST00000380535 AKAP17AQ02040 695 aaKnown RBP16.01■□□□□ 0.15
TNFSF13-203ENST00000380535 ZSCAN30Q86W11 494 aa16.01■□□□□ 0.15
TNFSF13-203ENST00000380535 CTCFLQ8NI51 663 aaPredicted RBP16.01■□□□□ 0.15
TNFSF13-203ENST00000380535 PDLIM2Q96JY6 352 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms