RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 KLHL14Q9P2G3 628 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 HYOU1Q9Y4L1 999 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 CLGNO14967 610 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 CADPS2Q86UW7 1296 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 CAPS2Q9BXY5 557 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 TYW1Q9NV66 732 aaKnown RBP10.63□□□□□ -0.71
SNX1-202ENST00000380285 TNRQ92752 1358 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 PEX26Q7Z412 305 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 RABGAP1Q9Y3P9 1069 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 KIAA0556O60303 1618 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 PHLPP2Q6ZVD8 1323 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 DNM2P50570 870 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 TNNI3KQ59H18 835 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 DCAF5Q96JK2 942 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 THEGQ9P2T0 379 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.63□□□□□ -0.71
SNX1-202ENST00000380285 FPGT-TNNI3KV9GXZ4 949 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 GBP5Q96PP8 586 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 MCM9Q9NXL9 1143 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 A0A1W2PP64 1363 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 KDM3AQ9Y4C1 1321 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 RGS16O15492 202 aaPredicted RBP10.63□□□□□ -0.71
SNX1-202ENST00000380285 ZNF131P52739 623 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 ANKRD20A3Q5VUR7 823 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 TTC6Q86TZ1 520 aa10.63□□□□□ -0.71
SNX1-202ENST00000380285 KRT71Q3SY84 523 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 SND1Q7KZF4 910 aaKnown RBP eCLIP10.62□□□□□ -0.719e-6■■□□□ 12.1
SNX1-202ENST00000380285 NELFBQ8WX92 580 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 NT5C3AQ9H0P0 336 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 PHBP35232 272 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 MTX1Q13505 466 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 SETDB2Q96T68 719 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 XPO4Q9C0E2 1151 aaKnown RBP10.62□□□□□ -0.71
SNX1-202ENST00000380285 PA2G4Q9UQ80 394 aaKnown RBP10.62□□□□□ -0.71
SNX1-202ENST00000380285 IGSF3O75054 1194 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 MRPS9P82933 396 aaKnown RBP10.62□□□□□ -0.71
SNX1-202ENST00000380285 MTHFSDQ2M296 383 aaKnown RBP10.62□□□□□ -0.71
SNX1-202ENST00000380285 PNMA8AQ86V59 439 aaPredicted RBP10.62□□□□□ -0.71
SNX1-202ENST00000380285 CCT6BQ92526 530 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 DDX41Q9UJV9 622 aaKnown RBP10.62□□□□□ -0.71
SNX1-202ENST00000380285 SLC8A3P57103 927 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 BBOF1Q8ND07 529 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 AMFRQ9UKV5 643 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 EYA2O00167 538 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 FOXO3O43524 673 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 PUM3Q15397 648 aaKnown RBP10.62□□□□□ -0.71
SNX1-202ENST00000380285 ZNF174Q15697 407 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 FNBP1Q96RU3 617 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 PPP1R12CQ9BZL4 782 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 ASIC3Q9UHC3 531 aa10.62□□□□□ -0.71
SNX1-202ENST00000380285 ARL1P40616 181 aaPredicted RBP10.61□□□□□ -0.71
SNX1-202ENST00000380285 RNASELQ05823 741 aaKnown RBP10.61□□□□□ -0.71
SNX1-202ENST00000380285 KLHL30Q0D2K2 578 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 ABCC10Q5T3U5 1492 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 SYNMO15061 1565 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 H7C1D1 291 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 DIS3L2Q8IYB7 885 aaKnown RBP10.61□□□□□ -0.71
SNX1-202ENST00000380285 IWS1Q96ST2 819 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 TCHPQ9BT92 498 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 METTL22Q9BUU2 404 aaPredicted RBP10.61□□□□□ -0.71
SNX1-202ENST00000380285 GJC1P36383 396 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 TBC1D31Q96DN5 1066 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 SBNO1A3KN83 1393 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 LDHBP07195 334 aaKnown RBP10.61□□□□□ -0.71
SNX1-202ENST00000380285 CEP104O60308 925 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 HSPA1LP34931 641 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 GALNT17Q6IS24 598 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 PPP2R2CQ9Y2T4 447 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 CAPN7Q9Y6W3 813 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 CCDC169A6NNP5 214 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 CMA1P23946 247 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 CTNNA1P35221 906 aaKnown RBP10.61□□□□□ -0.71
SNX1-202ENST00000380285 RFC4P35249 363 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 SNCBQ16143 134 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 HSP90AA5PQ58FG0 334 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 CDC37L1Q7L3B6 337 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 CDAN1Q8IWY9 1227 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 TSPYL6Q8N831 410 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 PLBD2Q8NHP8 589 aa10.61□□□□□ -0.71
SNX1-202ENST00000380285 A0A1W2PQ27 194 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 A0A1W2PQ64 194 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 A0A1W2PQD8 194 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 NUP153P49790 1475 aaKnown RBP10.6□□□□□ -0.71
SNX1-202ENST00000380285 YTHDC2Q9H6S0 1430 aaKnown RBP10.6□□□□□ -0.71
SNX1-202ENST00000380285 MAN1A1P33908 653 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 MUM1Q2TAK8 710 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 CHST3Q7LGC8 479 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 TSC1Q92574 1164 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 RNF14Q9UBS8 474 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 GOLGA8QA0A0J9YX86 632 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 GOLGA8OA6NCC3 632 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 GOLGA8NF8WBI6 632 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 GADD45BO75293 160 aaPredicted RBP10.6□□□□□ -0.71
SNX1-202ENST00000380285 CHL1O00533 1208 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 CCNT1O60563 726 aaKnown RBP10.6□□□□□ -0.71
SNX1-202ENST00000380285 UNC13AQ9UPW8 1703 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 ARHGEF10O15013 1369 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 ABCC4O15439 1325 aa10.6□□□□□ -0.71
SNX1-202ENST00000380285 TDRD7Q8NHU6 1098 aaKnown RBP10.6□□□□□ -0.71
SNX1-202ENST00000380285 BZW2Q9Y6E2 419 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms