RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 C6orf229H3BNL8 230 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 ONECUT3O60422 494 aaPredicted RBP9.44□□□□□ -0.9
VPS36-201ENST00000378060 CTNNA2P26232 953 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 TIMM10P62072 90 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 NKX1-1Q15270 411 aaPredicted RBP9.44□□□□□ -0.9
VPS36-201ENST00000378060 CFAP58Q5T655 872 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 ADALQ6DHV7 355 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 KRT27Q7Z3Y8 459 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 ZNF496Q96IT1 587 aaPredicted RBP9.44□□□□□ -0.9
VPS36-201ENST00000378060 CABP5Q9NP86 173 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 IGSF3O75054 1194 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 CYP26C1Q6V0L0 522 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 SMIM5Q71RC9 77 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 PAF1Q8N7H5 531 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 MRFAP1L1Q96HT8 127 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 NLRP3Q96P20 1036 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 USP44Q9H0E7 712 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 BCL2L12Q9HB09 334 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 ZSWIM6Q9HCJ5 1215 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 MTMR6Q9Y217 621 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 SBF2Q86WG5 1849 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 WDHD1O75717 1129 aaPredicted RBP9.44□□□□□ -0.9
VPS36-201ENST00000378060 TRIM37O94972 964 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 ELF2Q15723 593 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 CCDC174Q6PII3 467 aa9.44□□□□□ -0.9
VPS36-201ENST00000378060 CDCA7Q9BWT1 371 aaPredicted RBP9.44□□□□□ -0.9
VPS36-201ENST00000378060 IRS4O14654 1257 aaPredicted RBP9.43□□□□□ -0.9
VPS36-201ENST00000378060 PHACTR2O75167 634 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 KRT13P13646 458 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 PLCG2P16885 1265 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 TBC1D8BQ0IIM8 1120 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 ME3Q16798 604 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 CCDC121Q6ZUS5 278 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 MICALL1Q8N3F8 863 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 C17orf53Q8N3J3 647 aaPredicted RBP9.43□□□□□ -0.9
VPS36-201ENST00000378060 MAGEB6Q8N7X4 407 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 ZNF274Q96GC6 653 aaPredicted RBP9.43□□□□□ -0.9
VPS36-201ENST00000378060 TTC14Q96N46 770 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 NUP58Q9BVL2 599 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 NFE2L3Q9Y4A8 694 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 TTC31Q49AM3 519 aaPredicted RBP9.43□□□□□ -0.9
VPS36-201ENST00000378060 DIS3L2Q8IYB7 885 aaKnown RBP9.43□□□□□ -0.9
VPS36-201ENST00000378060 MRC1P22897 1456 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 GCKRQ14397 625 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 GPT2Q8TD30 523 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 IPO4Q8TEX9 1081 aaKnown RBP9.43□□□□□ -0.9
VPS36-201ENST00000378060 NCOA5Q9HCD5 579 aaKnown RBP9.43□□□□□ -0.9
VPS36-201ENST00000378060 KIAA1468Q9P260 1216 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 FBXO3Q9UK99 471 aa9.43□□□□□ -0.9
VPS36-201ENST00000378060 MCM7P33993 719 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 EIF4A1P60842 406 aaKnown RBP9.42□□□□□ -0.9
VPS36-201ENST00000378060 CUL4AQ13619 759 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 UBE4AQ14139 1066 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 C6orf163Q5TEZ5 329 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 B4GALNT4Q76KP1 1039 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 DHX37Q8IY37 1157 aaKnown RBP9.42□□□□□ -0.9
VPS36-201ENST00000378060 RRP36Q96EU6 259 aaKnown RBP9.42□□□□□ -0.9
VPS36-201ENST00000378060 CAPZA3Q96KX2 299 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 SLC4A9Q96Q91 983 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 ATG3Q9NT62 314 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 BTAF1O14981 1849 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 VWA3AA6NCI4 1184 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 SUCLG2Q96I99 432 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 NAP1L4Q99733 375 aaKnown RBP9.42□□□□□ -0.9
VPS36-201ENST00000378060 BCL9O00512 1426 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 B4E1Z4 1266 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 POLR2DO15514 142 aaKnown RBP9.42□□□□□ -0.9
VPS36-201ENST00000378060 GPAA1O43292 621 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 NF2P35240 595 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 ACTN2P35609 894 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 HS2ST1Q7LGA3 356 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 NBPF5PQ86XG9 351 aaPredicted RBP9.42□□□□□ -0.9
VPS36-201ENST00000378060 FERMT2Q96AC1 680 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 CCDC51Q96ER9 411 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 KIF4AO95239 1232 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 MBD4O95243 580 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 IBSPP21815 317 aaPredicted RBP9.42□□□□□ -0.9
VPS36-201ENST00000378060 VWA3BQ502W6 1294 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 MYSM1Q5VVJ2 828 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 KRT40Q6A162 431 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 GPATCH11Q8N954 259 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 AFAP1L1Q8TED9 768 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 RPGRIP1Q96KN7 1286 aa9.42□□□□□ -0.9
VPS36-201ENST00000378060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.42□□□□□ -0.9
VPS36-201ENST00000378060 IQSEC3Q9UPP2 1182 aaPredicted RBP9.42□□□□□ -0.9
VPS36-201ENST00000378060 JAK2O60674 1132 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 RXRAP19793 462 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 DZIP3Q86Y13 1208 aaKnown RBP9.41□□□□□ -0.9
VPS36-201ENST00000378060 GPR161Q8N6U8 529 aaKnown RBP9.41□□□□□ -0.9
VPS36-201ENST00000378060 MTRF1LQ9UGC7 380 aaKnown RBP9.41□□□□□ -0.9
VPS36-201ENST00000378060 PALD1Q9ULE6 856 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 PAPPAQ13219 1627 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 ERVV-2B6SEH9 535 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 RPL13P26373 211 aaKnown RBP9.41□□□□□ -0.9
VPS36-201ENST00000378060 ETF1P62495 437 aaKnown RBP9.41□□□□□ -0.9
VPS36-201ENST00000378060 CPLX4Q7Z7G2 160 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 IQCDQ96DY2 449 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 IKBKGQ9Y6K9 419 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 SYNRGQ9UMZ2 1314 aa9.41□□□□□ -0.9
VPS36-201ENST00000378060 KCPQ6ZWJ8 1503 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms