RNA–Protein interactions for RNA: ENST00000377881.6

TDRD3-202, Transcript of tudor domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TDRD3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-202ENST00000377881 VSTM4Q8IW00 320 aa11.14□□□□□ -0.63
TDRD3-202ENST00000377881 STK11IPQ8N1F8 1099 aa11.14□□□□□ -0.63
TDRD3-202ENST00000377881 CLIC6Q96NY7 704 aa11.14□□□□□ -0.63
TDRD3-202ENST00000377881 PYM1Q9BRP8 204 aaKnown RBP11.14□□□□□ -0.63
TDRD3-202ENST00000377881 RAI14Q9P0K7 980 aa11.14□□□□□ -0.63
TDRD3-202ENST00000377881 CCDC88AQ3V6T2 1871 aa11.14□□□□□ -0.63
TDRD3-202ENST00000377881 USP27XA6NNY8 438 aa11.13□□□□□ -0.63
TDRD3-202ENST00000377881 ZSCAN12O43309 604 aa11.13□□□□□ -0.63
TDRD3-202ENST00000377881 PRPF3O43395 683 aaKnown RBP11.13□□□□□ -0.63
TDRD3-202ENST00000377881 DDAH1O94760 285 aa11.13□□□□□ -0.63
TDRD3-202ENST00000377881 TOP1P11387 765 aaKnown RBP11.13□□□□□ -0.63
TDRD3-202ENST00000377881 MDM2Q00987 491 aaPredicted RBP11.13□□□□□ -0.63
TDRD3-202ENST00000377881 SEC23AQ15436 765 aa11.13□□□□□ -0.63
TDRD3-202ENST00000377881 CFAP100Q494V2 611 aa11.13□□□□□ -0.63
TDRD3-202ENST00000377881 ENOX1Q8TC92 643 aaKnown RBP11.13□□□□□ -0.63
TDRD3-202ENST00000377881 PPP1R13BQ96KQ4 1090 aa11.13□□□□□ -0.63
TDRD3-202ENST00000377881 BSDC1Q9NW68 430 aaPredicted RBP11.13□□□□□ -0.63
TDRD3-202ENST00000377881 PCDHA5Q9Y5H7 936 aa11.13□□□□□ -0.63
TDRD3-202ENST00000377881 TNKSO95271 1327 aa11.13□□□□□ -0.63
TDRD3-202ENST00000377881 FGRP09769 529 aa11.13□□□□□ -0.63
TDRD3-202ENST00000377881 KRT2P35908 639 aa11.13□□□□□ -0.63
TDRD3-202ENST00000377881 TOB1P50616 345 aaPredicted RBP11.13□□□□□ -0.63
TDRD3-202ENST00000377881 E4F1Q66K89 784 aaPredicted RBP11.13□□□□□ -0.63
TDRD3-202ENST00000377881 NUP133Q8WUM0 1156 aa11.13□□□□□ -0.63
TDRD3-202ENST00000377881 FERMT2Q96AC1 680 aa11.13□□□□□ -0.63
TDRD3-202ENST00000377881 ZSCAN10Q96SZ4 725 aaPredicted RBP11.13□□□□□ -0.63
TDRD3-202ENST00000377881 AATFQ9NY61 560 aaKnown RBP eCLIP11.13□□□□□ -0.63
TDRD3-202ENST00000377881 TACC3Q9Y6A5 838 aa11.13□□□□□ -0.63
TDRD3-202ENST00000377881 PHLPP2Q6ZVD8 1323 aa11.13□□□□□ -0.63
TDRD3-202ENST00000377881 TRIM75PA6NK02 468 aa11.12□□□□□ -0.63
TDRD3-202ENST00000377881 ERCC5P28715 1186 aaPredicted RBP11.12□□□□□ -0.63
TDRD3-202ENST00000377881 MIGA1Q8NAN2 632 aa11.12□□□□□ -0.63
TDRD3-202ENST00000377881 ZNF397Q8NF99 534 aaPredicted RBP11.12□□□□□ -0.63
TDRD3-202ENST00000377881 HSD3B7Q9H2F3 369 aa11.12□□□□□ -0.63
TDRD3-202ENST00000377881 TRMT1Q9NXH9 659 aaKnown RBP11.12□□□□□ -0.63
TDRD3-202ENST00000377881 MAN1B1Q9UKM7 699 aa11.12□□□□□ -0.63
TDRD3-202ENST00000377881 FAM177BA6PVY3 158 aa11.12□□□□□ -0.63
TDRD3-202ENST00000377881 MINDY4BA8MYZ0 360 aa11.12□□□□□ -0.63
TDRD3-202ENST00000377881 SARSP49591 514 aaKnown RBP11.12□□□□□ -0.63
TDRD3-202ENST00000377881 IFIT1BQ5T764 474 aaKnown RBP11.12□□□□□ -0.63
TDRD3-202ENST00000377881 BARGINQ6ZT62 677 aa11.12□□□□□ -0.63
TDRD3-202ENST00000377881 SRRTQ9BXP5 876 aaKnown RBP11.12□□□□□ -0.63
TDRD3-202ENST00000377881 TMX1Q9H3N1 280 aa11.12□□□□□ -0.63
TDRD3-202ENST00000377881 L2HGDHQ9H9P8 463 aa11.12□□□□□ -0.63
TDRD3-202ENST00000377881 INCENPQ9NQS7 918 aa11.12□□□□□ -0.63
TDRD3-202ENST00000377881 OGFRQ9NZT2 677 aa11.12□□□□□ -0.63
TDRD3-202ENST00000377881 KCNJ14Q9UNX9 436 aa11.12□□□□□ -0.63
TDRD3-202ENST00000377881 ARHGAP6O43182 974 aa11.11□□□□□ -0.63
TDRD3-202ENST00000377881 GUCY1A2P33402 732 aa11.11□□□□□ -0.63
TDRD3-202ENST00000377881 MORC3Q14149 939 aa11.11□□□□□ -0.63
TDRD3-202ENST00000377881 NUTM2AQ8IVF1 878 aaPredicted RBP11.11□□□□□ -0.63
TDRD3-202ENST00000377881 ZKSCAN3Q9BRR0 538 aa11.11□□□□□ -0.63
TDRD3-202ENST00000377881 RIOK1Q9BRS2 568 aaKnown RBP11.11□□□□□ -0.63
TDRD3-202ENST00000377881 NYXQ9GZU5 481 aa11.11□□□□□ -0.63
TDRD3-202ENST00000377881 ABCF2Q9UG63 623 aa11.11□□□□□ -0.63
TDRD3-202ENST00000377881 COL24A1Q17RW2 1714 aa11.11□□□□□ -0.63
TDRD3-202ENST00000377881 BAZ2AQ9UIF9 1905 aaKnown RBP11.11□□□□□ -0.63
TDRD3-202ENST00000377881 POLR2DO15514 142 aaKnown RBP11.11□□□□□ -0.63
TDRD3-202ENST00000377881 ITPK1Q13572 414 aa11.11□□□□□ -0.63
TDRD3-202ENST00000377881 PHF20Q9BVI0 1012 aa11.11□□□□□ -0.63
TDRD3-202ENST00000377881 SERTAD1Q9UHV2 236 aa11.11□□□□□ -0.63
TDRD3-202ENST00000377881 ORC4O43929 436 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 ATP1A3P13637 1013 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 CDK11BP21127 795 aaKnown RBP11.1□□□□□ -0.63
TDRD3-202ENST00000377881 TRAPPC10P48553 1259 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 PLCD1P51178 756 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 SLC10A5Q5PT55 438 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 ISM2Q6H9L7 571 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 PPP4R3CPQ6ZMV5 832 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 SPATA20Q8TB22 786 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 ANKRD2Q9GZV1 360 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 FANCLQ9NW38 375 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 ACTN4O43707 911 aaKnown RBP11.1□□□□□ -0.63
TDRD3-202ENST00000377881 ETF1P62495 437 aaKnown RBP11.1□□□□□ -0.63
TDRD3-202ENST00000377881 UTP14CQ5TAP6 766 aaKnown RBP11.1□□□□□ -0.63
TDRD3-202ENST00000377881 HOMER1Q86YM7 354 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 ENAHQ8N8S7 591 aaPredicted RBP11.1□□□□□ -0.63
TDRD3-202ENST00000377881 CRNKL1Q9BZJ0 848 aaKnown RBP11.1□□□□□ -0.63
TDRD3-202ENST00000377881 CABP5Q9NP86 173 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 PCDHB6Q9Y5E3 794 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 SPATA31A5Q5VU36 1347 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 SPATA31A7Q8IWB4 1347 aa11.1□□□□□ -0.63
TDRD3-202ENST00000377881 SNAP23O00161 211 aa11.09□□□□□ -0.63
TDRD3-202ENST00000377881 STX10O60499 249 aa11.09□□□□□ -0.63
TDRD3-202ENST00000377881 ZNF18P17022 549 aa11.09□□□□□ -0.63
TDRD3-202ENST00000377881 FOXP4Q8IVH2 680 aaPredicted RBP11.09□□□□□ -0.63
TDRD3-202ENST00000377881 CTCFLQ8NI51 663 aaPredicted RBP11.09□□□□□ -0.63
TDRD3-202ENST00000377881 SDR42E1Q8WUS8 393 aa11.09□□□□□ -0.63
TDRD3-202ENST00000377881 GTPBP4Q9BZE4 634 aaKnown RBP11.09□□□□□ -0.63
TDRD3-202ENST00000377881 ATP8A2Q9NTI2 1148 aa11.09□□□□□ -0.63
TDRD3-202ENST00000377881 ARPP21Q9UBL0 812 aaPredicted RBP11.09□□□□□ -0.63
TDRD3-202ENST00000377881 ZNF215Q9UL58 517 aaPredicted RBP11.09□□□□□ -0.63
TDRD3-202ENST00000377881 COL1A1P02452 1464 aaPredicted RBP11.09□□□□□ -0.63
TDRD3-202ENST00000377881 A0A0G2JS52 829 aa11.09□□□□□ -0.63
TDRD3-202ENST00000377881 SLFN14P0C7P3 912 aa11.09□□□□□ -0.63
TDRD3-202ENST00000377881 TBX2Q13207 712 aaPredicted RBP11.09□□□□□ -0.63
TDRD3-202ENST00000377881 NR5A1Q13285 461 aa11.09□□□□□ -0.63
TDRD3-202ENST00000377881 CCDC178Q5BJE1 867 aa11.09□□□□□ -0.63
TDRD3-202ENST00000377881 SPECC1LQ69YQ0 1117 aa11.09□□□□□ -0.63
TDRD3-202ENST00000377881 MARCH10Q8NA82 808 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms