RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 PEAK1Q9H792 1746 aa16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 DEXIO95424 95 aa16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 AMOTL1Q8IY63 956 aa16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 LPIN2Q92539 896 aa16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 SYMPKQ92797 1274 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 GPKOWQ92917 476 aaPredicted RBP eCLIP16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 MCM9Q9NXL9 1143 aa16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 ANKRD26Q9UPS8 1709 aa16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 GABPB1Q06547 395 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 TMEM94Q12767 1356 aa16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CTAGE9A4FU28 777 aa16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 PDE8AO60658 829 aa16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 PCCAP05165 728 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 ARID5AQ03989 594 aa16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 RBL2Q08999 1139 aa16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 NLRP10Q86W26 655 aa16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 SRRTQ9BXP5 876 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 RSPH14Q9UHP6 348 aa16.31■□□□□ 0.2
TNFRSF1B-201ENST00000376259 DIP2BQ9P265 1576 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CTAGE15A4D2H0 777 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CTAGE8P0CG41 777 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 RNASE9P60153 205 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CTAGE6Q86UF2 777 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CTAGE4Q8IX94 777 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 PXDNLA1KZ92 1463 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 UBN2Q6ZU65 1347 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 NMT2O60551 498 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 STIM1Q13586 685 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 VSTM4Q8IW00 320 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 PLCD3Q8N3E9 789 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 STRBPQ96SI9 672 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 RUFY1Q96T51 708 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 ANKIB1Q9P2G1 1089 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 UTYO14607 1347 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 PSDA5PKW4 1024 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 PTGDRQ13258 359 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CCDC152Q4G0S7 254 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 TRMT1LQ7Z2T5 733 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 MLKLQ8NB16 471 aa16.3■□□□□ 0.2
TNFRSF1B-201ENST00000376259 ZPR1O75312 459 aa16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 PLEKHA8P1O95397 391 aa16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CCDC70Q6NSX1 233 aa16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 RBM43Q6ZSC3 357 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 SPATA31D1Q6ZQQ2 1576 aa16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 EIF3JO75822 258 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 PPARAQ07869 468 aa16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 TTC38Q5R3I4 469 aa16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CCDC181Q5TID7 509 aa16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 TAF3Q5VWG9 929 aa16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 GIGYF2Q6Y7W6 1299 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 NYAP1Q6ZVC0 841 aa16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 SAP30BPQ9UHR5 308 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 G3V3G9 751 aa16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 DCAF8Q5TAQ9 597 aa16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 KANK3Q6NY19 840 aa16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 PARD6BQ9BYG5 372 aa16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 OSBPL5Q9H0X9 879 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CPVLQ9H3G5 476 aa16.29■□□□□ 0.2
TNFRSF1B-201ENST00000376259 MYO1BO43795 1136 aa16.28■□□□□ 0.2
TNFRSF1B-201ENST00000376259 GOLGA8HP0CJ92 632 aa16.28■□□□□ 0.2
TNFRSF1B-201ENST00000376259 TDRD12Q587J7 1177 aaKnown RBP16.28■□□□□ 0.2
TNFRSF1B-201ENST00000376259 NKX2-3Q8TAU0 364 aa16.28■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CRACR2AQ9BSW2 395 aa16.28■□□□□ 0.2
TNFRSF1B-201ENST00000376259 TEX13AQ9BXU3 409 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1B-201ENST00000376259 ALDH8A1Q9H2A2 487 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1B-201ENST00000376259 KAT14Q9H8E8 782 aa16.28■□□□□ 0.2
TNFRSF1B-201ENST00000376259 PTPROQ16827 1216 aa16.28■□□□□ 0.2
TNFRSF1B-201ENST00000376259 FOXP4Q8IVH2 680 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1B-201ENST00000376259 SLC35F6Q8N357 371 aa16.28■□□□□ 0.2
TNFRSF1B-201ENST00000376259 GPR108Q9NPR9 543 aa16.28■□□□□ 0.2
TNFRSF1B-201ENST00000376259 GOLGA6L9A6NEM1 432 aa16.27■□□□□ 0.2
TNFRSF1B-201ENST00000376259 ANKRD18AQ8IVF6 992 aa16.27■□□□□ 0.2
TNFRSF1B-201ENST00000376259 RGS22Q8NE09 1264 aa16.27■□□□□ 0.2
TNFRSF1B-201ENST00000376259 TFR2Q9UP52 801 aa16.27■□□□□ 0.2
TNFRSF1B-201ENST00000376259 ANKARQ7Z5J8 1434 aa16.27■□□□□ 0.2
TNFRSF1B-201ENST00000376259 EIF6P56537 245 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CCDC122Q5T0U0 273 aa16.27■□□□□ 0.2
TNFRSF1B-201ENST00000376259 UTP14CQ5TAP6 766 aaKnown RBP16.27■□□□□ 0.2
TNFRSF1B-201ENST00000376259 LY9Q9HBG7 655 aa16.27■□□□□ 0.2
TNFRSF1B-201ENST00000376259 PDE11AQ9HCR9 933 aa16.27■□□□□ 0.2
TNFRSF1B-201ENST00000376259 CIAO1O76071 339 aa16.27■□□□□ 0.19
TNFRSF1B-201ENST00000376259 IQUBQ8NA54 791 aa16.27■□□□□ 0.19
TNFRSF1B-201ENST00000376259 CCDC148Q8NFR7 591 aa16.27■□□□□ 0.19
TNFRSF1B-201ENST00000376259 MMRN2Q9H8L6 949 aa16.27■□□□□ 0.19
TNFRSF1B-201ENST00000376259 RICTORQ6R327 1708 aa16.27■□□□□ 0.19
TNFRSF1B-201ENST00000376259 SOS2Q07890 1332 aaPredicted RBP16.27■□□□□ 0.19
TNFRSF1B-201ENST00000376259 F8W031 263 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 MMP1P03956 469 aa16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 ASIC1P78348 528 aa16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 LETM2Q2VYF4 491 aa16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 ZNF444Q8N0Y2 327 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 ANKRD13CQ8N6S4 541 aa16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 FAM107BQ9H098 131 aa16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 SUGCTQ9HAC7 445 aa16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 IKQ13123 557 aaPredicted RBP16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 CCDC96Q2M329 555 aa16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 SOGA3Q5TF21 947 aa16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 ACBD3Q9H3P7 528 aa16.26■□□□□ 0.19
TNFRSF1B-201ENST00000376259 CWC15Q9P013 229 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms