RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 SPDYE1Q8NFV5 336 aaPredicted RBP10.79□□□□□ -0.68
SF3A3-201ENST00000373019 AENQ8WTP8 325 aaKnown RBP10.79□□□□□ -0.68
SF3A3-201ENST00000373019 COL15A1P39059 1388 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 ANKRD18BA2A2Z9 1011 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 ENO4A6NNW6 628 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 AKR1B15C9JRZ8 316 aaPredicted RBP10.78□□□□□ -0.68
SF3A3-201ENST00000373019 USPL1Q5W0Q7 1092 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 RRP36Q96EU6 259 aaKnown RBP10.78□□□□□ -0.68
SF3A3-201ENST00000373019 MED15Q96RN5 788 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 C1orf167Q5SNV9 1468 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 DNM1LO00429 736 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 SPTLC2O15270 562 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 ALDH1L1O75891 902 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 SSBP05455 408 aaKnown RBP eCLIP10.78□□□□□ -0.68
SF3A3-201ENST00000373019 EPB41P11171 864 aaKnown RBP10.78□□□□□ -0.68
SF3A3-201ENST00000373019 CMA1P23946 247 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 RBL2Q08999 1139 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 ABTB2Q8N961 1025 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 ZNF473Q8WTR7 871 aaKnown RBP10.78□□□□□ -0.68
SF3A3-201ENST00000373019 NGLY1Q96IV0 654 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 NEK1Q96PY6 1258 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 EPN3Q9H201 632 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 POLD4Q9HCU8 107 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 SLC39A2Q9NP94 309 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 POLR3EQ9NVU0 708 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 HMG20BQ9P0W2 317 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 FAM208AQ9UK61 1670 aaKnown RBP10.78□□□□□ -0.68
SF3A3-201ENST00000373019 GOLGA8KD6RF30 607 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 RNF187Q5TA31 235 aaPredicted RBP10.78□□□□□ -0.68
SF3A3-201ENST00000373019 KCNG4Q8TDN1 519 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 SAAL1Q96ER3 474 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 SCLT1Q96NL6 688 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 HDAC6Q9UBN7 1215 aa10.78□□□□□ -0.68
SF3A3-201ENST00000373019 ACEP12821 1306 aa10.77□□□□□ -0.68
SF3A3-201ENST00000373019 OPLAHO14841 1288 aa10.77□□□□□ -0.68
SF3A3-201ENST00000373019 FDPSP14324 419 aaKnown RBP10.77□□□□□ -0.68
SF3A3-201ENST00000373019 MCM3P25205 808 aa10.77□□□□□ -0.68
SF3A3-201ENST00000373019 LSP1P33241 339 aa10.77□□□□□ -0.68
SF3A3-201ENST00000373019 CDR1P51861 262 aa10.77□□□□□ -0.68
SF3A3-201ENST00000373019 FMR1Q06787 632 aaKnown RBP eCLIP10.77□□□□□ -0.683e-11■■■■■ 43.1
SF3A3-201ENST00000373019 IFT88Q13099 833 aa10.77□□□□□ -0.68
SF3A3-201ENST00000373019 STK38Q15208 465 aa10.77□□□□□ -0.68
SF3A3-201ENST00000373019 THEMIS2Q5TEJ8 643 aa10.77□□□□□ -0.68
SF3A3-201ENST00000373019 STRN4Q9NRL3 753 aa10.77□□□□□ -0.68
SF3A3-201ENST00000373019 ZRANB1Q9UGI0 708 aa10.77□□□□□ -0.68
SF3A3-201ENST00000373019 KDM6AO15550 1401 aaPredicted RBP10.77□□□□□ -0.69
SF3A3-201ENST00000373019 TEX33O43247 280 aa10.77□□□□□ -0.69
SF3A3-201ENST00000373019 NBPF7P0C2Y1 421 aaPredicted RBP10.77□□□□□ -0.69
SF3A3-201ENST00000373019 RRS1Q15050 365 aaKnown RBP10.77□□□□□ -0.69
SF3A3-201ENST00000373019 NAA15Q9BXJ9 866 aaKnown RBP10.77□□□□□ -0.69
SF3A3-201ENST00000373019 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.77□□□□□ -0.69
SF3A3-201ENST00000373019 TAF5LO75529 589 aa10.77□□□□□ -0.69
SF3A3-201ENST00000373019 YEATS4O95619 227 aa10.77□□□□□ -0.69
SF3A3-201ENST00000373019 GBP2P32456 591 aaPredicted RBP10.77□□□□□ -0.69
SF3A3-201ENST00000373019 OS9Q13438 667 aaPredicted RBP10.77□□□□□ -0.69
SF3A3-201ENST00000373019 RBBP5Q15291 538 aaKnown RBP10.77□□□□□ -0.69
SF3A3-201ENST00000373019 SF3A1Q15459 793 aaKnown RBP10.77□□□□□ -0.69
SF3A3-201ENST00000373019 APTXQ7Z2E3 356 aaKnown RBP10.77□□□□□ -0.69
SF3A3-201ENST00000373019 METTL16Q86W50 562 aaKnown RBP10.77□□□□□ -0.69
SF3A3-201ENST00000373019 HINFPQ9BQA5 517 aa10.77□□□□□ -0.69
SF3A3-201ENST00000373019 OSBPL7Q9BZF2 842 aa10.77□□□□□ -0.69
SF3A3-201ENST00000373019 NCOA5Q9HCD5 579 aaKnown RBP10.77□□□□□ -0.69
SF3A3-201ENST00000373019 GGA2Q9UJY4 613 aa10.77□□□□□ -0.69
SF3A3-201ENST00000373019 HPSEQ9Y251 543 aa10.77□□□□□ -0.69
SF3A3-201ENST00000373019 ANKARQ7Z5J8 1434 aa10.77□□□□□ -0.69
SF3A3-201ENST00000373019 SRGAP2O75044 1071 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 POLR3DP05423 398 aaPredicted RBP10.76□□□□□ -0.69
SF3A3-201ENST00000373019 SEC24CP53992 1094 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 HDLBPQ00341 1268 aaKnown RBP10.76□□□□□ -0.69
SF3A3-201ENST00000373019 OTUD7BQ6GQQ9 843 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 MIS18BP1Q6P0N0 1132 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 MICALCLQ6ZW33 695 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 BZW1Q7L1Q6 419 aaKnown RBP10.76□□□□□ -0.69
SF3A3-201ENST00000373019 SH2D3CQ8N5H7 860 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 C3orf20Q8ND61 904 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 RASSF8Q8NHQ8 419 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 HAUS2Q9NVX0 235 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 LAMA4Q16363 1823 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 MST1RQ04912 1400 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 MYH8P13535 1937 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 ENC1O14682 589 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 MGRN1O60291 552 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 COQ9O75208 318 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 ATP5JP18859 108 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 ATP1A2P50993 1020 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 NLRP6P59044 892 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 CCT2P78371 535 aaKnown RBP10.76□□□□□ -0.69
SF3A3-201ENST00000373019 GUCY1A3Q02108 690 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 PSMD2Q13200 908 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 DRP2Q13474 957 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 CCDC50Q8IVM0 306 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 DRAXINQ8NBI3 349 aaPredicted RBP10.76□□□□□ -0.69
SF3A3-201ENST00000373019 RNPC3Q96LT9 517 aaKnown RBP10.76□□□□□ -0.69
SF3A3-201ENST00000373019 MYO1AQ9UBC5 1043 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 TTF2Q9UNY4 1162 aaKnown RBP10.76□□□□□ -0.69
SF3A3-201ENST00000373019 NFE2L3Q9Y4A8 694 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 A0A1B0GTH6 734 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 A6NNZ2 444 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 FECHP22830 423 aa10.76□□□□□ -0.69
SF3A3-201ENST00000373019 CHRNA2Q15822 529 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms