RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ZHX2Q9Y6X8 837 aa12.39□□□□□ -0.43
COL5A1-202ENST00000371820 FOCADQ5VW36 1801 aa12.39□□□□□ -0.43
COL5A1-202ENST00000371820 FLT1P17948 1338 aa12.38□□□□□ -0.43
COL5A1-202ENST00000371820 MYO5AQ9Y4I1 1855 aaKnown RBP12.38□□□□□ -0.43
COL5A1-202ENST00000371820 PTPRAP18433 802 aa12.38□□□□□ -0.43
COL5A1-202ENST00000371820 USP5P45974 858 aa12.38□□□□□ -0.43
COL5A1-202ENST00000371820 MRE11P49959 708 aa12.38□□□□□ -0.43
COL5A1-202ENST00000371820 SLC4A8Q2Y0W8 1093 aa12.38□□□□□ -0.43
COL5A1-202ENST00000371820 FOXP4Q8IVH2 680 aaPredicted RBP12.38□□□□□ -0.43
COL5A1-202ENST00000371820 MAPKAPK5Q8IW41 473 aa12.38□□□□□ -0.43
COL5A1-202ENST00000371820 GPATCH3Q96I76 525 aa12.38□□□□□ -0.43
COL5A1-202ENST00000371820 TRIM47Q96LD4 638 aa12.38□□□□□ -0.43
COL5A1-202ENST00000371820 PARK7Q99497 189 aaKnown RBP12.38□□□□□ -0.43
COL5A1-202ENST00000371820 DNAJC2Q99543 621 aaKnown RBP12.38□□□□□ -0.43
COL5A1-202ENST00000371820 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL5A1-202ENST00000371820 CWC22Q9HCG8 908 aaKnown RBP12.38□□□□□ -0.43
COL5A1-202ENST00000371820 PTPRFP10586 1907 aa12.38□□□□□ -0.43
COL5A1-202ENST00000371820 A0A0G2JLL6 359 aaPredicted RBP12.37□□□□□ -0.43
COL5A1-202ENST00000371820 EPB41L2O43491 1005 aaKnown RBP12.37□□□□□ -0.43
COL5A1-202ENST00000371820 MYCP01106 439 aaPredicted RBP12.37□□□□□ -0.43
COL5A1-202ENST00000371820 HSP90AA1P07900 732 aaKnown RBP12.37□□□□□ -0.43
COL5A1-202ENST00000371820 BCRP11274 1271 aa12.37□□□□□ -0.43
COL5A1-202ENST00000371820 ATP5JP18859 108 aa12.37□□□□□ -0.43
COL5A1-202ENST00000371820 OSBPP22059 807 aa12.37□□□□□ -0.43
COL5A1-202ENST00000371820 PSMC4P43686 418 aa12.37□□□□□ -0.43
COL5A1-202ENST00000371820 RABEP1Q15276 862 aa12.37□□□□□ -0.43
COL5A1-202ENST00000371820 GPAT2Q6NUI2 795 aa12.37□□□□□ -0.43
COL5A1-202ENST00000371820 PRRT2Q7Z6L0 340 aaPredicted RBP12.37□□□□□ -0.43
COL5A1-202ENST00000371820 ADGRA1Q86SQ6 560 aa12.37□□□□□ -0.43
COL5A1-202ENST00000371820 AS3MTQ9HBK9 375 aa12.37□□□□□ -0.43
COL5A1-202ENST00000371820 GINM1Q9NU53 330 aa12.37□□□□□ -0.43
COL5A1-202ENST00000371820 SRRDQ9UH36 339 aa12.37□□□□□ -0.43
COL5A1-202ENST00000371820 CDK5RAP2Q96SN8 1893 aa12.37□□□□□ -0.43
COL5A1-202ENST00000371820 PHIPQ8WWQ0 1821 aa12.37□□□□□ -0.43
COL5A1-202ENST00000371820 MAGEB6P1A0A0J9YX57 407 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 GOLIM4O00461 696 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 TRAK2O60296 914 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 ECM2O94769 699 aaPredicted RBP12.36□□□□□ -0.43
COL5A1-202ENST00000371820 ASNSP08243 561 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 CYP2C8P10632 490 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 CAP2P40123 477 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 DYNLL1P63167 89 aaKnown RBP12.36□□□□□ -0.43
COL5A1-202ENST00000371820 NUCB2P80303 420 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 HABP4Q5JVS0 413 aaKnown RBP12.36□□□□□ -0.43
COL5A1-202ENST00000371820 SLC9C2Q5TAH2 1124 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 TTC6Q86TZ1 520 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 MIGA1Q8NAN2 632 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 CRNKL1Q9BZJ0 848 aaKnown RBP12.36□□□□□ -0.43
COL5A1-202ENST00000371820 PAG1Q9NWQ8 432 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 SLC45A1Q9Y2W3 748 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 AFG3L2Q9Y4W6 797 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 NDUFB9Q9Y6M9 179 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 ATAD5Q96QE3 1844 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 MGAMO43451 1857 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 MYPNQ86TC9 1320 aa12.36□□□□□ -0.43
COL5A1-202ENST00000371820 USP17L5A8MUK1 530 aa12.35□□□□□ -0.43
COL5A1-202ENST00000371820 K7ELQ4 463 aaPredicted RBP12.35□□□□□ -0.43
COL5A1-202ENST00000371820 REC8O95072 547 aa12.35□□□□□ -0.43
COL5A1-202ENST00000371820 FMNL1O95466 1100 aaPredicted RBP12.35□□□□□ -0.43
COL5A1-202ENST00000371820 SLURP2P0DP57 97 aa12.35□□□□□ -0.43
COL5A1-202ENST00000371820 PDE6AP16499 860 aa12.35□□□□□ -0.43
COL5A1-202ENST00000371820 HOXD10P28358 340 aa12.35□□□□□ -0.43
COL5A1-202ENST00000371820 MCM2P49736 904 aa12.35□□□□□ -0.43
COL5A1-202ENST00000371820 PABPC4Q13310 644 aaKnown RBP eCLIP12.35□□□□□ -0.43
COL5A1-202ENST00000371820 ZSCAN25Q6NSZ9 544 aa12.35□□□□□ -0.43
COL5A1-202ENST00000371820 GADL1Q6ZQY3 521 aa12.35□□□□□ -0.43
COL5A1-202ENST00000371820 CLEC17AQ6ZS10 378 aa12.35□□□□□ -0.43
COL5A1-202ENST00000371820 SHISA4Q96DD7 197 aa12.35□□□□□ -0.43
COL5A1-202ENST00000371820 HAUS7Q99871 368 aa12.35□□□□□ -0.43
COL5A1-202ENST00000371820 BOLA2Q9H3K6 86 aa12.35□□□□□ -0.43
COL5A1-202ENST00000371820 PNMA3Q9UL41 463 aa12.35□□□□□ -0.43
COL5A1-202ENST00000371820 FAM196BA6NMK8 535 aa12.34□□□□□ -0.43
COL5A1-202ENST00000371820 GRK4P32298 578 aa12.34□□□□□ -0.43
COL5A1-202ENST00000371820 FCGRTP55899 365 aa12.34□□□□□ -0.43
COL5A1-202ENST00000371820 MTFR1Q15390 333 aa12.34□□□□□ -0.43
COL5A1-202ENST00000371820 METTL16Q86W50 562 aaKnown RBP12.34□□□□□ -0.43
COL5A1-202ENST00000371820 PROCA1Q8NCQ7 364 aaPredicted RBP12.34□□□□□ -0.43
COL5A1-202ENST00000371820 ZNF280CQ8ND82 737 aa12.34□□□□□ -0.43
COL5A1-202ENST00000371820 RAET1EQ8TD07 263 aa12.34□□□□□ -0.43
COL5A1-202ENST00000371820 RIOK1Q9BRS2 568 aaKnown RBP12.34□□□□□ -0.43
COL5A1-202ENST00000371820 EHD4Q9H223 541 aa12.34□□□□□ -0.43
COL5A1-202ENST00000371820 ECHDC1Q9NTX5 307 aa12.34□□□□□ -0.43
COL5A1-202ENST00000371820 SAP30BPQ9UHR5 308 aaKnown RBP12.34□□□□□ -0.43
COL5A1-202ENST00000371820 TAOK2Q9UL54 1235 aa12.34□□□□□ -0.43
COL5A1-202ENST00000371820 PALD1Q9ULE6 856 aa12.34□□□□□ -0.43
COL5A1-202ENST00000371820 ZNF532Q9HCE3 1301 aa12.34□□□□□ -0.43
COL5A1-202ENST00000371820 LOC285556D6RIA3 1793 aa12.33□□□□□ -0.44
COL5A1-202ENST00000371820 MYH1P12882 1939 aa12.33□□□□□ -0.44
COL5A1-202ENST00000371820 SIPA1L1O43166 1804 aa12.33□□□□□ -0.44
COL5A1-202ENST00000371820 TRIM75PA6NK02 468 aa12.33□□□□□ -0.44
COL5A1-202ENST00000371820 DDIT3P35638 169 aa12.33□□□□□ -0.44
COL5A1-202ENST00000371820 PRKCZQ05513 592 aa12.33□□□□□ -0.44
COL5A1-202ENST00000371820 LRRFIP1Q32MZ4 808 aaKnown RBP12.33□□□□□ -0.44
COL5A1-202ENST00000371820 AMOTL1Q8IY63 956 aa12.33□□□□□ -0.44
COL5A1-202ENST00000371820 OSBPL3Q9H4L5 887 aa12.33□□□□□ -0.44
COL5A1-202ENST00000371820 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.33□□□□□ -0.44
COL5A1-202ENST00000371820 SERPINB13Q9UIV8 391 aa12.33□□□□□ -0.44
COL5A1-202ENST00000371820 AGTPBP1Q9UPW5 1226 aa12.33□□□□□ -0.44
COL5A1-202ENST00000371820 NAV1Q8NEY1 1877 aa12.33□□□□□ -0.44
COL5A1-202ENST00000371820 CEP290O15078 2479 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms