RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 LMNAP02545 664 aaKnown RBP16.85■□□□□ 0.29
COL5A1-201ENST00000371817 PAWRQ96IZ0 340 aaKnown RBP16.85■□□□□ 0.29
COL5A1-201ENST00000371817 DAAM1Q9Y4D1 1078 aa16.85■□□□□ 0.29
COL5A1-201ENST00000371817 PDE1AP54750 535 aa16.85■□□□□ 0.29
COL5A1-201ENST00000371817 FCHSD1Q86WN1 690 aa16.85■□□□□ 0.29
COL5A1-201ENST00000371817 PALM2Q8IXS6 379 aa16.85■□□□□ 0.29
COL5A1-201ENST00000371817 CHUKO15111 745 aa16.85■□□□□ 0.29
COL5A1-201ENST00000371817 POLR2DO15514 142 aaKnown RBP16.85■□□□□ 0.29
COL5A1-201ENST00000371817 HMGB2P26583 209 aaKnown RBP16.85■□□□□ 0.29
COL5A1-201ENST00000371817 CFAP70Q5T0N1 1121 aa16.85■□□□□ 0.29
COL5A1-201ENST00000371817 JADE1Q6IE81 842 aa16.85■□□□□ 0.29
COL5A1-201ENST00000371817 NUTM2BA6NNL0 878 aaPredicted RBP16.84■□□□□ 0.29
COL5A1-201ENST00000371817 NUTM2EB1AL46 878 aaPredicted RBP16.84■□□□□ 0.29
COL5A1-201ENST00000371817 FAM133BQ5BKY9 247 aaKnown RBP16.84■□□□□ 0.29
COL5A1-201ENST00000371817 PPP1R42Q7Z4L9 355 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 KIAA2013Q8IYS2 634 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 CAMSAP2Q08AD1 1489 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 LRRC8AQ8IWT6 810 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 TEKT1Q969V4 418 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 ZBBXA8MT70 800 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 KRIT1O00522 736 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 NLRP12P59046 1061 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 RRS1Q15050 365 aaKnown RBP16.84■□□□□ 0.29
COL5A1-201ENST00000371817 SV2BQ7L1I2 683 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 POLR3CQ9BUI4 534 aaPredicted RBP16.84■□□□□ 0.29
COL5A1-201ENST00000371817 NBPF3Q9H094 633 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 ARHGAP5Q13017 1502 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 E9PMD0 336 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 KCTD16Q68DU8 428 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 ZNF449Q6P9G9 518 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 CSGALNACT2Q8N6G5 542 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 SLF1Q9BQI6 1058 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 CCDC51Q96ER9 411 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 TUBB6Q9BUF5 446 aa16.84■□□□□ 0.29
COL5A1-201ENST00000371817 BICC1Q9H694 974 aaKnown RBP16.84■□□□□ 0.29
COL5A1-201ENST00000371817 CALM1P0DP23 149 aa16.83■□□□□ 0.29
COL5A1-201ENST00000371817 CALM2P0DP24 149 aa16.83■□□□□ 0.29
COL5A1-201ENST00000371817 CALM3P0DP25 149 aa16.83■□□□□ 0.29
COL5A1-201ENST00000371817 LONRF3Q496Y0 759 aa16.83■□□□□ 0.29
COL5A1-201ENST00000371817 TADA2BQ86TJ2 420 aa16.83■□□□□ 0.29
COL5A1-201ENST00000371817 PPME1Q9Y570 386 aa16.83■□□□□ 0.29
COL5A1-201ENST00000371817 VWA3AA6NCI4 1184 aa16.83■□□□□ 0.29
COL5A1-201ENST00000371817 OCA2Q04671 838 aa16.83■□□□□ 0.29
COL5A1-201ENST00000371817 PPP2R5DQ14738 602 aa16.83■□□□□ 0.29
COL5A1-201ENST00000371817 ENAHQ8N8S7 591 aaPredicted RBP16.83■□□□□ 0.29
COL5A1-201ENST00000371817 DTNBP1Q96EV8 351 aa16.83■□□□□ 0.29
COL5A1-201ENST00000371817 AMFRQ9UKV5 643 aa16.83■□□□□ 0.29
COL5A1-201ENST00000371817 CFAP65Q6ZU64 1925 aaKnown RBP16.83■□□□□ 0.28
COL5A1-201ENST00000371817 MAP7D3Q8IWC1 876 aa16.83■□□□□ 0.28
COL5A1-201ENST00000371817 SETD1BQ9UPS6 1966 aaKnown RBP16.83■□□□□ 0.28
COL5A1-201ENST00000371817 LOC102724159A0A0B4J2E5 919 aa16.83■□□□□ 0.28
COL5A1-201ENST00000371817 MCF2P10911 925 aa16.83■□□□□ 0.28
COL5A1-201ENST00000371817 PWP2Q15269 919 aaKnown RBP16.83■□□□□ 0.28
COL5A1-201ENST00000371817 CCDC84Q86UT8 332 aaPredicted RBP16.83■□□□□ 0.28
COL5A1-201ENST00000371817 NCOA2Q15596 1464 aa16.83■□□□□ 0.28
COL5A1-201ENST00000371817 SPDYE3A6NKU9 549 aa16.83■□□□□ 0.28
COL5A1-201ENST00000371817 KDM1AO60341 852 aa16.83■□□□□ 0.28
COL5A1-201ENST00000371817 GJC2Q5T442 439 aaPredicted RBP16.83■□□□□ 0.28
COL5A1-201ENST00000371817 GRK7Q8WTQ7 553 aa16.83■□□□□ 0.28
COL5A1-201ENST00000371817 FAM212AQ96EL1 285 aa16.83■□□□□ 0.28
COL5A1-201ENST00000371817 HAUS2Q9NVX0 235 aa16.83■□□□□ 0.28
COL5A1-201ENST00000371817 CABP1Q9NZU7 370 aa16.83■□□□□ 0.28
COL5A1-201ENST00000371817 RCN2Q14257 317 aa16.83■□□□□ 0.28
COL5A1-201ENST00000371817 ZNF202O95125 648 aa16.82■□□□□ 0.28
COL5A1-201ENST00000371817 NCBP1Q09161 790 aaKnown RBP16.82■□□□□ 0.28
COL5A1-201ENST00000371817 CRNKL1Q9BZJ0 848 aaKnown RBP16.82■□□□□ 0.28
COL5A1-201ENST00000371817 GIMAP4Q9NUV9 329 aa16.82■□□□□ 0.28
COL5A1-201ENST00000371817 KCNH3Q9ULD8 1083 aa16.82■□□□□ 0.28
COL5A1-201ENST00000371817 NBPF10Q6P3W6 841 aaKnown RBP16.82■□□□□ 0.28
COL5A1-201ENST00000371817 PTPDC1A2A3K4 754 aa16.82■□□□□ 0.28
COL5A1-201ENST00000371817 MAGEA1P43355 309 aa16.82■□□□□ 0.28
COL5A1-201ENST00000371817 LONRF2Q1L5Z9 754 aa16.82■□□□□ 0.28
COL5A1-201ENST00000371817 GFM2Q969S9 779 aaKnown RBP16.82■□□□□ 0.28
COL5A1-201ENST00000371817 THUMPD2Q9BTF0 503 aaKnown RBP16.82■□□□□ 0.28
COL5A1-201ENST00000371817 CALUO43852 315 aaPredicted RBP16.82■□□□□ 0.28
COL5A1-201ENST00000371817 PLCD1P51178 756 aa16.82■□□□□ 0.28
COL5A1-201ENST00000371817 YIPF3Q9GZM5 350 aa16.82■□□□□ 0.28
COL5A1-201ENST00000371817 GNA11P29992 359 aa16.82■□□□□ 0.28
COL5A1-201ENST00000371817 DAPK3O43293 454 aa16.82■□□□□ 0.28
COL5A1-201ENST00000371817 RUNDC3BQ96NL0 473 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 CNOT10Q9H9A5 744 aaKnown RBP16.81■□□□□ 0.28
COL5A1-201ENST00000371817 ZNF711Q9Y462 761 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 MAD1L1Q9Y6D9 718 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 MROH2BQ7Z745 1585 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 TMEM232C9JQI7 657 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 HLA-DOAP06340 250 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 TRIML2Q8N7C3 387 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 PLEKHA4Q9H4M7 779 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 RIC8AQ9NPQ8 531 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 BCRP11274 1271 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 SPZ1Q9BXG8 430 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 CADPSQ9ULU8 1353 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 RSAD2Q8WXG1 361 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 MYO1CO00159 1063 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 SFMBT2Q5VUG0 894 aa16.81■□□□□ 0.28
COL5A1-201ENST00000371817 DBF4Q9UBU7 674 aaPredicted RBP16.81■□□□□ 0.28
COL5A1-201ENST00000371817 KRT75O95678 551 aa16.8■□□□□ 0.28
COL5A1-201ENST00000371817 GSTA1P08263 222 aa16.8■□□□□ 0.28
COL5A1-201ENST00000371817 GSTA2P09210 222 aa16.8■□□□□ 0.28
COL5A1-201ENST00000371817 SLC8A3P57103 927 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms