RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 C12orf49Q9H741 205 aa6.93□□□□□ -1.3
ECHDC1-204ENST00000368292 SPG7Q9UQ90 795 aa6.93□□□□□ -1.3
ECHDC1-204ENST00000368292 WASHC2CQ9Y4E1 1318 aa6.93□□□□□ -1.3
ECHDC1-204ENST00000368292 TMEM2Q9UHN6 1383 aa6.93□□□□□ -1.3
ECHDC1-204ENST00000368292 KIAA1107Q9UPP5 1409 aa6.93□□□□□ -1.3
ECHDC1-204ENST00000368292 MEGF11A6BM72 1044 aa6.92□□□□□ -1.3
ECHDC1-204ENST00000368292 ZNF157P51786 506 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-204ENST00000368292 TMED8Q6PL24 325 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-204ENST00000368292 FRMD6Q96NE9 622 aa6.92□□□□□ -1.3
ECHDC1-204ENST00000368292 UBL7Q96S82 380 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-204ENST00000368292 USP26Q9BXU7 913 aa6.92□□□□□ -1.3
ECHDC1-204ENST00000368292 ZFYVE1Q9HBF4 777 aa6.92□□□□□ -1.3
ECHDC1-204ENST00000368292 AKAP2Q9Y2D5 859 aa6.92□□□□□ -1.3
ECHDC1-204ENST00000368292 ARHGAP35Q9NRY4 1499 aa6.92□□□□□ -1.3
ECHDC1-204ENST00000368292 CHD4Q14839 1912 aa6.91□□□□□ -1.3
ECHDC1-204ENST00000368292 A0A0U1RQG5 324 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-204ENST00000368292 ECEL1O95672 775 aa6.91□□□□□ -1.3
ECHDC1-204ENST00000368292 GSTT1P30711 240 aa6.91□□□□□ -1.3
ECHDC1-204ENST00000368292 PSMD2Q13200 908 aa6.91□□□□□ -1.3
ECHDC1-204ENST00000368292 RSPO4Q2I0M5 234 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-204ENST00000368292 NKAPLQ5M9Q1 402 aa6.91□□□□□ -1.3
ECHDC1-204ENST00000368292 DDX17Q92841 729 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-204ENST00000368292 TMPRSS13Q9BYE2 586 aa6.91□□□□□ -1.3
ECHDC1-204ENST00000368292 FAM8A1Q9UBU6 413 aa6.91□□□□□ -1.3
ECHDC1-204ENST00000368292 AK5Q9Y6K8 562 aa6.91□□□□□ -1.3
ECHDC1-204ENST00000368292 CEP152O94986 1710 aa6.9□□□□□ -1.3
ECHDC1-204ENST00000368292 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-204ENST00000368292 SORBS3O60504 671 aa6.9□□□□□ -1.3
ECHDC1-204ENST00000368292 FURINP09958 794 aa6.9□□□□□ -1.3
ECHDC1-204ENST00000368292 USP17L7P0C7H9 530 aa6.9□□□□□ -1.3
ECHDC1-204ENST00000368292 MAOBP27338 520 aa6.9□□□□□ -1.3
ECHDC1-204ENST00000368292 POU4F3Q15319 338 aa6.9□□□□□ -1.3
ECHDC1-204ENST00000368292 ANKRD24Q8TF21 1146 aa6.9□□□□□ -1.3
ECHDC1-204ENST00000368292 RUSC1Q9BVN2 902 aa6.9□□□□□ -1.3
ECHDC1-204ENST00000368292 RNF208Q9H0X6 261 aa6.9□□□□□ -1.3
ECHDC1-204ENST00000368292 TMEM39AQ9NV64 488 aa6.9□□□□□ -1.3
ECHDC1-204ENST00000368292 MARF1Q9Y4F3 1742 aaKnown RBP6.9□□□□□ -1.31
ECHDC1-204ENST00000368292 SCAMP3O14828 347 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 EIF4EBP3O60516 100 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 CYP11A1P05108 521 aa6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 GLB1P16278 677 aa6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 HDLBPQ00341 1268 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 EXOSC6Q5RKV6 272 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 STK35Q8TDR2 534 aa6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 TP53INP1Q96A56 240 aa6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 NECAB3Q96P71 396 aaPredicted RBP6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 MRS2Q9HD23 443 aa6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 EID1Q9Y6B2 187 aa6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 NINLQ9Y2I6 1382 aa6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 NCOA3Q9Y6Q9 1424 aa6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 RALGAPBQ86X10 1494 aa6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 MBD5Q9P267 1494 aa6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 TNS1Q9HBL0 1735 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-204ENST00000368292 MST1RQ04912 1400 aa6.88□□□□□ -1.31
ECHDC1-204ENST00000368292 NCLP19338 710 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-204ENST00000368292 EIF4BP23588 611 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-204ENST00000368292 CANXP27824 592 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-204ENST00000368292 C9orf131Q5VYM1 1079 aa6.88□□□□□ -1.31
ECHDC1-204ENST00000368292 TMEM87AQ8NBN3 555 aa6.88□□□□□ -1.31
ECHDC1-204ENST00000368292 ZNF526Q8TF50 670 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-204ENST00000368292 LRRC59Q96AG4 307 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-204ENST00000368292 FAM46AQ96IP4 442 aaKnown RBP6.88□□□□□ -1.31
ECHDC1-204ENST00000368292 PRDM16Q9HAZ2 1276 aa6.88□□□□□ -1.31
ECHDC1-204ENST00000368292 VTI1BQ9UEU0 232 aa6.88□□□□□ -1.31
ECHDC1-204ENST00000368292 GPN3Q9UHW5 284 aaPredicted RBP6.88□□□□□ -1.31
ECHDC1-204ENST00000368292 PPM1HQ9ULR3 514 aa6.88□□□□□ -1.31
ECHDC1-204ENST00000368292 LAMC1P11047 1609 aa6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 COL22A1Q8NFW1 1626 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 PLEKHH2Q8IVE3 1493 aa6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 PTCH1Q13635 1447 aa6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 ENC1O14682 589 aa6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 FBXO24O75426 580 aa6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 CTSHP09668 335 aa6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 ITGB7P26010 798 aa6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 SETQ01105 290 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 AP3B2Q13367 1082 aa6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 TPTE2Q6XPS3 522 aa6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 PDZD3Q86UT5 571 aa6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 METTL16Q86W50 562 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 ARMC10Q8N2F6 343 aa6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 SMG8Q8ND04 991 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 DDX54Q8TDD1 881 aaKnown RBP6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 CEP41Q9BYV8 373 aa6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 SUGCTQ9HAC7 445 aa6.87□□□□□ -1.31
ECHDC1-204ENST00000368292 EFCAB6Q5THR3 1501 aa6.86□□□□□ -1.31
ECHDC1-204ENST00000368292 PAGE1O75459 146 aa6.86□□□□□ -1.31
ECHDC1-204ENST00000368292 TIAF1O95411 115 aa6.86□□□□□ -1.31
ECHDC1-204ENST00000368292 PREPP48147 710 aa6.86□□□□□ -1.31
ECHDC1-204ENST00000368292 FANCCQ00597 558 aa6.86□□□□□ -1.31
ECHDC1-204ENST00000368292 PPP2R3AQ06190 1150 aa6.86□□□□□ -1.31
ECHDC1-204ENST00000368292 NUTM2GQ5VZR2 741 aa6.86□□□□□ -1.31
ECHDC1-204ENST00000368292 ANKRD34AQ69YU3 496 aa6.86□□□□□ -1.31
ECHDC1-204ENST00000368292 TEX2Q8IWB9 1127 aa6.86□□□□□ -1.31
ECHDC1-204ENST00000368292 CORO1BQ9BR76 489 aa6.86□□□□□ -1.31
ECHDC1-204ENST00000368292 C19orf44Q9H6X5 657 aa6.86□□□□□ -1.31
ECHDC1-204ENST00000368292 RGPD1P0DJD0 1748 aa6.86□□□□□ -1.31
ECHDC1-204ENST00000368292 MYOM2P54296 1465 aa6.85□□□□□ -1.31
ECHDC1-204ENST00000368292 FMN1Q68DA7 1419 aa6.85□□□□□ -1.31
ECHDC1-204ENST00000368292 ZNF644Q9H582 1327 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-204ENST00000368292 DYRK3O43781 588 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms