RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 FOXP1Q9H334 677 aaPredicted RBP16.2■□□□□ 0.18
USF1-202ENST00000368020 GOLPH3LQ9H4A5 285 aa16.2■□□□□ 0.18
USF1-202ENST00000368020 PIM2Q9P1W9 311 aa16.2■□□□□ 0.18
USF1-202ENST00000368020 ANKIB1Q9P2G1 1089 aa16.2■□□□□ 0.18
USF1-202ENST00000368020 CLIC4Q9Y696 253 aa16.2■□□□□ 0.18
USF1-202ENST00000368020 GOLGA6L19H0YKK7 550 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 ORC4O43929 436 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 RANBP6O60518 1105 aaKnown RBP16.19■□□□□ 0.18
USF1-202ENST00000368020 PPFIA3O75145 1194 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 OFD1O75665 1012 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 ATP2B4P23634 1241 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 GSTO1P78417 241 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 MECOMQ03112 1051 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 SBK1Q52WX2 424 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 ZNF804AQ7Z570 1209 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 PHKBQ93100 1093 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 ZSCAN10Q96SZ4 725 aaPredicted RBP16.19■□□□□ 0.18
USF1-202ENST00000368020 NOL10Q9BSC4 688 aaKnown RBP16.19■□□□□ 0.18
USF1-202ENST00000368020 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.19■□□□□ 0.18
USF1-202ENST00000368020 TNKSO95271 1327 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 KIF28PB7ZC32 967 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 DDAH1O94760 285 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 RXRAP19793 462 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 TERF1P54274 439 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 PLCB2Q00722 1185 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 AKAP17AQ02040 695 aaKnown RBP16.19■□□□□ 0.18
USF1-202ENST00000368020 SEC23AQ15436 765 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 CATIPQ7Z7H3 387 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 CEP57L1Q8IYX8 460 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 SDF4Q9BRK5 362 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 SENP2Q9HC62 589 aa16.19■□□□□ 0.18
USF1-202ENST00000368020 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.19■□□□□ 0.18
USF1-202ENST00000368020 BRCA1P38398 1863 aaKnown RBP16.18■□□□□ 0.18
USF1-202ENST00000368020 LTBP1Q14766 1721 aa16.18■□□□□ 0.18
USF1-202ENST00000368020 IRS2Q9Y4H2 1338 aa16.18■□□□□ 0.18
USF1-202ENST00000368020 MMP1P03956 469 aa16.18■□□□□ 0.18
USF1-202ENST00000368020 GPSM2P81274 684 aa16.18■□□□□ 0.18
USF1-202ENST00000368020 PDE4BQ07343 736 aa16.18■□□□□ 0.18
USF1-202ENST00000368020 RILPL1Q5EBL4 403 aa16.18■□□□□ 0.18
USF1-202ENST00000368020 DZIP1Q86YF9 867 aaKnown RBP16.18■□□□□ 0.18
USF1-202ENST00000368020 NOSTRINQ8IVI9 506 aa16.18■□□□□ 0.18
USF1-202ENST00000368020 CRACR2BQ8N4Y2 399 aaPredicted RBP16.18■□□□□ 0.18
USF1-202ENST00000368020 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.18■□□□□ 0.18
USF1-202ENST00000368020 TACC3Q9Y6A5 838 aa16.18■□□□□ 0.18
USF1-202ENST00000368020 CCDC178Q5BJE1 867 aa16.17■□□□□ 0.18
USF1-202ENST00000368020 IFIT1BQ5T764 474 aaKnown RBP16.17■□□□□ 0.18
USF1-202ENST00000368020 SOGA3Q5TF21 947 aa16.17■□□□□ 0.18
USF1-202ENST00000368020 CTR9Q6PD62 1173 aa16.17■□□□□ 0.18
USF1-202ENST00000368020 SARM1Q6SZW1 724 aa16.17■□□□□ 0.18
USF1-202ENST00000368020 LUZP1Q86V48 1076 aa16.17■□□□□ 0.18
USF1-202ENST00000368020 AMOTL1Q8IY63 956 aa16.17■□□□□ 0.18
USF1-202ENST00000368020 CCDC144CPQ8IYA2 1237 aa16.17■□□□□ 0.18
USF1-202ENST00000368020 MPNDQ8N594 471 aa16.17■□□□□ 0.18
USF1-202ENST00000368020 NKX2-3Q8TAU0 364 aa16.17■□□□□ 0.18
USF1-202ENST00000368020 INCENPQ9NQS7 918 aa16.17■□□□□ 0.18
USF1-202ENST00000368020 PPP1R1BQ9UD71 204 aaPredicted RBP16.17■□□□□ 0.18
USF1-202ENST00000368020 GGA1Q9UJY5 639 aa16.17■□□□□ 0.18
USF1-202ENST00000368020 CEP131Q9UPN4 1083 aa16.17■□□□□ 0.18
USF1-202ENST00000368020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.17■□□□□ 0.18
USF1-202ENST00000368020 MORC2Q9Y6X9 1032 aaPredicted RBP16.17■□□□□ 0.18
USF1-202ENST00000368020 FAM237AA0A1B0GTK4 181 aa16.16■□□□□ 0.18
USF1-202ENST00000368020 CUTAO60888 179 aa16.16■□□□□ 0.18
USF1-202ENST00000368020 CDC25BP30305 580 aa16.16■□□□□ 0.18
USF1-202ENST00000368020 MYL10Q9BUA6 226 aa16.16■□□□□ 0.18
USF1-202ENST00000368020 DNAJC25Q9H1X3 360 aa16.16■□□□□ 0.18
USF1-202ENST00000368020 LDHCP07864 332 aa16.16■□□□□ 0.18
USF1-202ENST00000368020 NDUFA8P51970 172 aa16.16■□□□□ 0.18
USF1-202ENST00000368020 DYNLL1P63167 89 aaKnown RBP16.16■□□□□ 0.18
USF1-202ENST00000368020 AXDND1Q5T1B0 1012 aaPredicted RBP16.16■□□□□ 0.18
USF1-202ENST00000368020 NBPF11Q86T75 865 aa16.16■□□□□ 0.18
USF1-202ENST00000368020 ENAHQ8N8S7 591 aaPredicted RBP16.16■□□□□ 0.18
USF1-202ENST00000368020 TBC1D16Q8TBP0 767 aa16.16■□□□□ 0.18
USF1-202ENST00000368020 BPIFA3Q9BQP9 254 aa16.16■□□□□ 0.18
USF1-202ENST00000368020 DCP1AQ9NPI6 582 aaPredicted RBP16.16■□□□□ 0.18
USF1-202ENST00000368020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.16■□□□□ 0.18
USF1-202ENST00000368020 BECN2A8MW95 431 aa16.15■□□□□ 0.18
USF1-202ENST00000368020 UFL1O94874 794 aa16.15■□□□□ 0.18
USF1-202ENST00000368020 BAG3O95817 575 aa16.15■□□□□ 0.18
USF1-202ENST00000368020 LDHBP07195 334 aaKnown RBP16.15■□□□□ 0.18
USF1-202ENST00000368020 CHAF1AQ13111 956 aaPredicted RBP16.15■□□□□ 0.18
USF1-202ENST00000368020 DALRD3Q5D0E6 543 aaKnown RBP16.15■□□□□ 0.18
USF1-202ENST00000368020 DPP8Q6V1X1 898 aaPredicted RBP16.15■□□□□ 0.18
USF1-202ENST00000368020 ELOA2Q8IYF1 753 aaPredicted RBP16.15■□□□□ 0.18
USF1-202ENST00000368020 ZNF384Q8TF68 577 aa16.15■□□□□ 0.18
USF1-202ENST00000368020 NUP133Q8WUM0 1156 aa16.15■□□□□ 0.18
USF1-202ENST00000368020 AIFM3Q96NN9 605 aa16.15■□□□□ 0.18
USF1-202ENST00000368020 NAP1L5Q96NT1 182 aaPredicted RBP16.15■□□□□ 0.18
USF1-202ENST00000368020 MAP3K14Q99558 947 aa16.15■□□□□ 0.18
USF1-202ENST00000368020 ZKSCAN3Q9BRR0 538 aa16.15■□□□□ 0.18
USF1-202ENST00000368020 RTFDC1Q9BY42 306 aaPredicted RBP16.15■□□□□ 0.18
USF1-202ENST00000368020 BRMS1Q9HCU9 246 aa16.15■□□□□ 0.18
USF1-202ENST00000368020 KIAA1468Q9P260 1216 aa16.15■□□□□ 0.18
USF1-202ENST00000368020 HOOK1Q9UJC3 728 aaKnown RBP16.15■□□□□ 0.18
USF1-202ENST00000368020 SNED1Q8TER0 1413 aa16.15■□□□□ 0.18
USF1-202ENST00000368020 NAV1Q8NEY1 1877 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 A0A1B0GVL5 298 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 USP17L12C9JPN9 530 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 USP17L21D6R901 530 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 ZNF202O95125 648 aa16.14■□□□□ 0.17
USF1-202ENST00000368020 BMP15O95972 392 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms