RNA–Protein interactions for RNA: ENST00000367067.8

CD55-205, Transcript of CD55 molecule (Cromer blood group), human

APPRIS ALT2 TSL 5 BASIC

Gene CD55, Length 1,843 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD55-205	ENST00000367067	ST3GAL1	Q11201	340 aa		24.79	■■□□□ 1.56
CD55-205	ENST00000367067	KIF4B	Q2VIQ3	1234 aa		24.79	■■□□□ 1.56
CD55-205	ENST00000367067	TMTC2	Q8N394	836 aa		24.79	■■□□□ 1.56
CD55-205	ENST00000367067	FAM151A	Q8WW52	585 aa		24.79	■■□□□ 1.56
CD55-205	ENST00000367067	GTF3C6	Q969F1	213 aa		24.79	■■□□□ 1.56
CD55-205	ENST00000367067	SENP2	Q9HC62	589 aa		24.79	■■□□□ 1.56
CD55-205	ENST00000367067	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	24.79	■■□□□ 1.56
CD55-205	ENST00000367067	SEC23A	Q15436	765 aa		24.79	■■□□□ 1.56
CD55-205	ENST00000367067	NFXL1	Q6ZNB6	911 aa		24.79	■■□□□ 1.56
CD55-205	ENST00000367067	CWC22	Q9HCG8	908 aa	Known RBP	24.79	■■□□□ 1.56
CD55-205	ENST00000367067	CNTNAP1	P78357	1384 aa		24.79	■■□□□ 1.56
CD55-205	ENST00000367067	TSPY3	P0CV98	308 aa		24.78	■■□□□ 1.56
CD55-205	ENST00000367067	TSPY8	P0CW00	308 aa		24.78	■■□□□ 1.56
CD55-205	ENST00000367067	DDIT3	P35638	169 aa		24.78	■■□□□ 1.56
CD55-205	ENST00000367067	FAM83A	Q86UY5	434 aa		24.78	■■□□□ 1.56
CD55-205	ENST00000367067	ENAH	Q8N8S7	591 aa	Predicted RBP	24.78	■■□□□ 1.56
CD55-205	ENST00000367067	TAOK2	Q9UL54	1235 aa		24.78	■■□□□ 1.56
CD55-205	ENST00000367067	CCDC69	A6NI79	296 aa		24.77	■■□□□ 1.56
CD55-205	ENST00000367067	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	24.77	■■□□□ 1.56
CD55-205	ENST00000367067	GOLGA8B	A8MQT2	603 aa		24.77	■■□□□ 1.56
CD55-205	ENST00000367067	SCRN1	Q12765	414 aa		24.77	■■□□□ 1.56
CD55-205	ENST00000367067	NBR1	Q14596	966 aa		24.77	■■□□□ 1.56
CD55-205	ENST00000367067	APOA5	Q6Q788	366 aa		24.77	■■□□□ 1.56
CD55-205	ENST00000367067	FOXP4	Q8IVH2	680 aa	Predicted RBP	24.77	■■□□□ 1.56
CD55-205	ENST00000367067	CSRNP1	Q96S65	589 aa		24.77	■■□□□ 1.56
CD55-205	ENST00000367067	NMT2	O60551	498 aa		24.76	■■□□□ 1.55
CD55-205	ENST00000367067	SLC12A7	Q9Y666	1083 aa		24.76	■■□□□ 1.55
CD55-205	ENST00000367067	ZC3H4	Q9UPT8	1303 aa	Known RBP	24.75	■■□□□ 1.55
CD55-205	ENST00000367067	SHMT1	P34896	483 aa		24.75	■■□□□ 1.55
CD55-205	ENST00000367067	EPS15	P42566	896 aa		24.75	■■□□□ 1.55
CD55-205	ENST00000367067	TNNI2	P48788	182 aa		24.75	■■□□□ 1.55
CD55-205	ENST00000367067	CCT2	P78371	535 aa	Known RBP	24.75	■■□□□ 1.55
CD55-205	ENST00000367067	IFIT1B	Q5T764	474 aa	Known RBP	24.75	■■□□□ 1.55
CD55-205	ENST00000367067	DPY19L2	Q6NUT2	758 aa		24.75	■■□□□ 1.55
CD55-205	ENST00000367067	TRIM34	Q9BYJ4	488 aa		24.75	■■□□□ 1.55
CD55-205	ENST00000367067	TCP11L1	Q9NUJ3	509 aa		24.75	■■□□□ 1.55
CD55-205	ENST00000367067	HPS5	Q9UPZ3	1129 aa		24.75	■■□□□ 1.55
CD55-205	ENST00000367067	TNFAIP1	Q13829	316 aa		24.75	■■□□□ 1.55
CD55-205	ENST00000367067	CCDC178	Q5BJE1	867 aa		24.75	■■□□□ 1.55
CD55-205	ENST00000367067	METTL16	Q86W50	562 aa	Known RBP	24.75	■■□□□ 1.55
CD55-205	ENST00000367067	CHMP4C	Q96CF2	233 aa		24.75	■■□□□ 1.55
CD55-205	ENST00000367067	DNAJC18	Q9H819	358 aa		24.75	■■□□□ 1.55
CD55-205	ENST00000367067	IL17RB	Q9NRM6	502 aa		24.75	■■□□□ 1.55
CD55-205	ENST00000367067	ZBTB43	O43298	467 aa		24.74	■■□□□ 1.55
CD55-205	ENST00000367067	LMOD1	P29536	600 aa	Predicted RBP	24.74	■■□□□ 1.55
CD55-205	ENST00000367067	SYNE3	Q6ZMZ3	975 aa		24.74	■■□□□ 1.55
CD55-205	ENST00000367067	NEDD1	Q8NHV4	660 aa		24.74	■■□□□ 1.55
CD55-205	ENST00000367067	TMEM39B	Q9GZU3	492 aa		24.74	■■□□□ 1.55
CD55-205	ENST00000367067	SMC3	Q9UQE7	1217 aa		24.74	■■□□□ 1.55
CD55-205	ENST00000367067	TRPM4	Q8TD43	1214 aa		24.73	■■□□□ 1.55
CD55-205	ENST00000367067	NCOA5	Q9HCD5	579 aa	Known RBP	24.73	■■□□□ 1.55
CD55-205	ENST00000367067	CHMP5	Q9NZZ3	219 aa		24.73	■■□□□ 1.55
CD55-205	ENST00000367067	HACL1	Q9UJ83	578 aa		24.73	■■□□□ 1.55
CD55-205	ENST00000367067	CIZ1	Q9ULV3	898 aa	Predicted RBP	24.73	■■□□□ 1.55
CD55-205	ENST00000367067	ASTN2	O75129	1339 aa	Predicted RBP	24.73	■■□□□ 1.55
CD55-205	ENST00000367067	FAM196B	A6NMK8	535 aa		24.72	■■□□□ 1.55
CD55-205	ENST00000367067	MICU3	Q86XE3	530 aa		24.72	■■□□□ 1.55
CD55-205	ENST00000367067	DGKH	Q86XP1	1220 aa		24.72	■■□□□ 1.55
CD55-205	ENST00000367067	RAB11FIP4	Q86YS3	637 aa		24.72	■■□□□ 1.55
CD55-205	ENST00000367067	PLIN4	Q96Q06	1357 aa		24.72	■■□□□ 1.55
CD55-205	ENST00000367067	GREB1L	Q9C091	1923 aa	Predicted RBP	24.72	■■□□□ 1.55
CD55-205	ENST00000367067	SLURP2	P0DP57	97 aa		24.72	■■□□□ 1.55
CD55-205	ENST00000367067	METAP2	P50579	478 aa	Known RBP eCLIP	24.72	■■□□□ 1.55
CD55-205	ENST00000367067	RCSD1	Q6JBY9	416 aa		24.72	■■□□□ 1.55
CD55-205	ENST00000367067	ZNF654	Q8IZM8	581 aa		24.72	■■□□□ 1.55
CD55-205	ENST00000367067	LLPH	Q9BRT6	129 aa	Known RBP	24.72	■■□□□ 1.55
CD55-205	ENST00000367067	HERC5	Q9UII4	1024 aa	Known RBP	24.72	■■□□□ 1.55
CD55-205	ENST00000367067	DHX16	O60231	1041 aa	Known RBP	24.71	■■□□□ 1.55
CD55-205	ENST00000367067	RCAN1	P53805	252 aa		24.71	■■□□□ 1.55
CD55-205	ENST00000367067	RASA3	Q14644	834 aa		24.71	■■□□□ 1.55
CD55-205	ENST00000367067	CCDC17	Q96LX7	622 aa		24.71	■■□□□ 1.55
CD55-205	ENST00000367067	MYL10	Q9BUA6	226 aa		24.71	■■□□□ 1.55
CD55-205	ENST00000367067	AKR1B1	P15121	316 aa		24.7	■■□□□ 1.55
CD55-205	ENST00000367067	TATDN1	Q6P1N9	297 aa		24.7	■■□□□ 1.55
CD55-205	ENST00000367067	ANKS1A	Q92625	1134 aa		24.7	■■□□□ 1.55
CD55-205	ENST00000367067	POLR2A	P24928	1970 aa	Known RBP	24.7	■■□□□ 1.54
CD55-205	ENST00000367067	RXRA	P19793	462 aa		24.7	■■□□□ 1.54
CD55-205	ENST00000367067	CATIP	Q7Z7H3	387 aa		24.7	■■□□□ 1.54
CD55-205	ENST00000367067	ADARB2	Q9NS39	739 aa	Known RBP	24.7	■■□□□ 1.54
CD55-205	ENST00000367067	PGAP2	Q9UHJ9	254 aa		24.7	■■□□□ 1.54
CD55-205	ENST00000367067	GOLGA8A	A7E2F4	631 aa		24.69	■■□□□ 1.54
CD55-205	ENST00000367067	GJB2	P29033	226 aa		24.69	■■□□□ 1.54
CD55-205	ENST00000367067	CERKL	Q49MI3	558 aa	Predicted RBP	24.69	■■□□□ 1.54
CD55-205	ENST00000367067	L3MBTL3	Q96JM7	780 aa	Predicted RBP	24.69	■■□□□ 1.54
CD55-205	ENST00000367067	STX8	Q9UNK0	236 aa		24.69	■■□□□ 1.54
CD55-205	ENST00000367067	SCAF8	Q9UPN6	1271 aa	Known RBP	24.69	■■□□□ 1.54
CD55-205	ENST00000367067	NID2	Q14112	1375 aa		24.69	■■□□□ 1.54
CD55-205	ENST00000367067	DTNB	O60941	627 aa		24.68	■■□□□ 1.54
CD55-205	ENST00000367067	HIRA	P54198	1017 aa	Predicted RBP	24.68	■■□□□ 1.54
CD55-205	ENST00000367067	ANGEL2	Q5VTE6	544 aa	Known RBP	24.68	■■□□□ 1.54
CD55-205	ENST00000367067	CDAN1	Q8IWY9	1227 aa		24.68	■■□□□ 1.54
CD55-205	ENST00000367067	CEP95	Q96GE4	821 aa		24.68	■■□□□ 1.54
CD55-205	ENST00000367067	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	24.68	■■□□□ 1.54
CD55-205	ENST00000367067	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	24.68	■■□□□ 1.54
CD55-205	ENST00000367067	CPLX1	O14810	134 aa		24.68	■■□□□ 1.54
CD55-205	ENST00000367067	CTDNEP1	O95476	244 aa		24.68	■■□□□ 1.54
CD55-205	ENST00000367067	APOBEC3F	Q8IUX4	373 aa	Known RBP	24.68	■■□□□ 1.54
CD55-205	ENST00000367067	CCDC144CP	Q8IYA2	1237 aa		24.68	■■□□□ 1.54
CD55-205	ENST00000367067	NSUN7	Q8NE18	718 aa	Known RBP	24.68	■■□□□ 1.54
CD55-205	ENST00000367067	KAT14	Q9H8E8	782 aa		24.68	■■□□□ 1.54

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