RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 TJP2Q9UDY2 1190 aa5.6□□□□□ -1.51
RNU4-1-201ENST00000363925 INPP5FQ9Y2H2 1132 aa5.6□□□□□ -1.51
RNU4-1-201ENST00000363925 POLR3KQ9Y2Y1 108 aaPredicted RBP5.6□□□□□ -1.51
RNU4-1-201ENST00000363925 UPK3BL1B0FP48 263 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 UPK3BL2E5RIL1 263 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 GREM1O60565 184 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 COBLO75128 1261 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 HTR3BO95264 441 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 ITIH2P19823 946 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 NTF4P34130 210 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 YARSP54577 528 aaKnown RBP5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 SLC6A19Q695T7 634 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 SEZ6L2Q6UXD5 910 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 CDH24Q86UP0 819 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 SLC51AQ86UW1 340 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 METTL16Q86W50 562 aaKnown RBP5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 ZDHHC13Q8IUH4 622 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 FAM181AQ8N9Y4 354 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 ACSF2Q96CM8 615 aaPredicted RBP5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 DUSP23Q9BVJ7 150 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 NT5C1AQ9BXI3 368 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 ACBD3Q9H3P7 528 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 CAPN10Q9HC96 672 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 PCMTD2Q9NV79 361 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 TACC3Q9Y6A5 838 aa5.59□□□□□ -1.51
RNU4-1-201ENST00000363925 GNAT3A8MTJ3 354 aa5.58□□□□□ -1.52
RNU4-1-201ENST00000363925 CHURC1-FNTBB4DL54 471 aa5.58□□□□□ -1.52
RNU4-1-201ENST00000363925 CBX7O95931 251 aa5.58□□□□□ -1.52
RNU4-1-201ENST00000363925 CST3P01034 146 aaPredicted RBP5.58□□□□□ -1.52
RNU4-1-201ENST00000363925 ITGB7P26010 798 aa5.58□□□□□ -1.52
RNU4-1-201ENST00000363925 SLBPQ14493 270 aaKnown RBP eCLIP5.58□□□□□ -1.52
RNU4-1-201ENST00000363925 LETMD1Q6P1Q0 360 aa5.58□□□□□ -1.52
RNU4-1-201ENST00000363925 MFSD2AQ8NA29 543 aa5.58□□□□□ -1.52
RNU4-1-201ENST00000363925 GATA6Q92908 595 aa5.58□□□□□ -1.52
RNU4-1-201ENST00000363925 TGIF2Q9GZN2 237 aa5.58□□□□□ -1.52
RNU4-1-201ENST00000363925 GTF2IRD1Q9UHL9 959 aa5.58□□□□□ -1.52
RNU4-1-201ENST00000363925 ADAM30Q9UKF2 790 aa5.58□□□□□ -1.52
RNU4-1-201ENST00000363925 FAM86C2PA6NEL3 165 aa5.57□□□□□ -1.52
RNU4-1-201ENST00000363925 RAG1P15918 1043 aa5.57□□□□□ -1.52
RNU4-1-201ENST00000363925 HOXA10P31260 410 aaPredicted RBP5.57□□□□□ -1.52
RNU4-1-201ENST00000363925 GBP1P32455 592 aa5.57□□□□□ -1.52
RNU4-1-201ENST00000363925 CLCQ05315 142 aa5.57□□□□□ -1.52
RNU4-1-201ENST00000363925 CPLX3Q8WVH0 158 aa5.57□□□□□ -1.52
RNU4-1-201ENST00000363925 GPRASP2Q96D09 838 aa5.57□□□□□ -1.52
RNU4-1-201ENST00000363925 PRDM5Q9NQX1 630 aaPredicted RBP5.57□□□□□ -1.52
RNU4-1-201ENST00000363925 RNF112Q9ULX5 631 aa5.57□□□□□ -1.52
RNU4-1-201ENST00000363925 EFR3BQ9Y2G0 817 aa5.57□□□□□ -1.52
RNU4-1-201ENST00000363925 PRR19A6NJB7 356 aa5.56□□□□□ -1.52
RNU4-1-201ENST00000363925 FAM155AB1AL88 458 aaPredicted RBP5.56□□□□□ -1.52
RNU4-1-201ENST00000363925 SLITRK5O94991 958 aa5.56□□□□□ -1.52
RNU4-1-201ENST00000363925 CYP7A1P22680 504 aa5.56□□□□□ -1.52
RNU4-1-201ENST00000363925 GNL2Q13823 731 aaKnown RBP5.56□□□□□ -1.52
RNU4-1-201ENST00000363925 ARSHQ5FYA8 562 aa5.56□□□□□ -1.52
RNU4-1-201ENST00000363925 SFRP5Q5T4F7 317 aa5.56□□□□□ -1.52
RNU4-1-201ENST00000363925 INTS5Q6P9B9 1019 aaKnown RBP5.56□□□□□ -1.52
RNU4-1-201ENST00000363925 CCDC81Q6ZN84 652 aa5.56□□□□□ -1.52
RNU4-1-201ENST00000363925 MCATQ8IVS2 390 aaKnown RBP5.56□□□□□ -1.52
RNU4-1-201ENST00000363925 MRPL41Q8IXM3 137 aaKnown RBP5.56□□□□□ -1.52
RNU4-1-201ENST00000363925 CRBNQ96SW2 442 aa5.56□□□□□ -1.52
RNU4-1-201ENST00000363925 LRRC3Q9BY71 257 aa5.56□□□□□ -1.52
RNU4-1-201ENST00000363925 KCNQ5Q9NR82 932 aa5.56□□□□□ -1.52
RNU4-1-201ENST00000363925 FOSL1P15407 271 aa5.55□□□□□ -1.52
RNU4-1-201ENST00000363925 ZNF746Q6NUN9 644 aaPredicted RBP5.55□□□□□ -1.52
RNU4-1-201ENST00000363925 NPM2Q86SE8 214 aaKnown RBP5.55□□□□□ -1.52
RNU4-1-201ENST00000363925 VPS37DQ86XT2 251 aa5.55□□□□□ -1.52
RNU4-1-201ENST00000363925 RIN3Q8TB24 985 aa5.55□□□□□ -1.52
RNU4-1-201ENST00000363925 BAHD1Q8TBE0 780 aaPredicted RBP5.55□□□□□ -1.52
RNU4-1-201ENST00000363925 CCDC74BQ96LY2 380 aa5.55□□□□□ -1.52
RNU4-1-201ENST00000363925 KIF2CQ99661 725 aa5.55□□□□□ -1.52
RNU4-1-201ENST00000363925 GINM1Q9NU53 330 aa5.55□□□□□ -1.52
RNU4-1-201ENST00000363925 PPT2Q9UMR5 302 aa5.55□□□□□ -1.52
RNU4-1-201ENST00000363925 ANGEL1Q9UNK9 670 aaKnown RBP5.55□□□□□ -1.52
RNU4-1-201ENST00000363925 ETV3P41162 512 aa5.54□□□□□ -1.52
RNU4-1-201ENST00000363925 NASPP49321 788 aaPredicted RBP5.54□□□□□ -1.52
RNU4-1-201ENST00000363925 CPSF6Q16630 551 aaKnown RBP eCLIP5.54□□□□□ -1.52
RNU4-1-201ENST00000363925 TMEM201Q5SNT2 666 aa5.54□□□□□ -1.52
RNU4-1-201ENST00000363925 CDKAL1Q5VV42 579 aa5.54□□□□□ -1.52
RNU4-1-201ENST00000363925 OVOS1Q6IE37 1185 aa5.54□□□□□ -1.52
RNU4-1-201ENST00000363925 SLITRK4Q8IW52 837 aa5.54□□□□□ -1.52
RNU4-1-201ENST00000363925 PLD6Q8N2A8 252 aaKnown RBP5.54□□□□□ -1.52
RNU4-1-201ENST00000363925 CYB5D2Q8WUJ1 264 aa5.54□□□□□ -1.52
RNU4-1-201ENST00000363925 PSMG3-AS1Q96PY0 264 aa5.54□□□□□ -1.52
RNU4-1-201ENST00000363925 ZC3H7BQ9UGR2 993 aaKnown RBP5.54□□□□□ -1.52
RNU4-1-201ENST00000363925 SLC22A31A6NKX4 558 aa5.53□□□□□ -1.52
RNU4-1-201ENST00000363925 EOMESO95936 686 aa5.53□□□□□ -1.52
RNU4-1-201ENST00000363925 CEACAM5P06731 702 aa5.53□□□□□ -1.52
RNU4-1-201ENST00000363925 CAP2P40123 477 aa5.53□□□□□ -1.52
RNU4-1-201ENST00000363925 RAD51AP2Q09MP3 1159 aa5.53□□□□□ -1.52
RNU4-1-201ENST00000363925 LRRFIP1Q32MZ4 808 aaKnown RBP5.53□□□□□ -1.52
RNU4-1-201ENST00000363925 NBPF11Q86T75 865 aa5.53□□□□□ -1.52
RNU4-1-201ENST00000363925 REXO1Q8N1G1 1221 aaKnown RBP5.53□□□□□ -1.52
RNU4-1-201ENST00000363925 NETO1Q8TDF5 533 aa5.53□□□□□ -1.52
RNU4-1-201ENST00000363925 SPATA32Q96LK8 384 aa5.53□□□□□ -1.52
RNU4-1-201ENST00000363925 ANTXR1Q9H6X2 564 aa5.53□□□□□ -1.52
RNU4-1-201ENST00000363925 GMIPQ9P107 970 aa5.53□□□□□ -1.52
RNU4-1-201ENST00000363925 DNAJA2O60884 412 aa5.52□□□□□ -1.53
RNU4-1-201ENST00000363925 MED26O95402 600 aa5.52□□□□□ -1.53
RNU4-1-201ENST00000363925 SSBP05455 408 aaKnown RBP eCLIP5.52□□□□□ -1.53
RNU4-1-201ENST00000363925 IMPDH2P12268 514 aa5.52□□□□□ -1.53
RNU4-1-201ENST00000363925 POLR2BP30876 1174 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms