RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 FOXB2Q5VYV0 432 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TREML4Q6UXN2 200 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 MPRIPQ6WCQ1 1025 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CHPFQ8IZ52 775 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SAMD3Q8N6K7 520 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 WDR66Q8TBY9 1149 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 GPBAR1Q8TDU6 330 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ACSBG1Q96GR2 724 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 GMCL1Q96IK5 515 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 DHRS1Q96LJ7 313 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CLUHP3Q96NS8 147 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SLC9A7Q96T83 725 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ASPSCR1Q9BZE9 553 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 UBE2OQ9C0C9 1292 aaKnown RBP4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 UBA5Q9GZZ9 404 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SOX17Q9H6I2 414 aaPredicted RBP4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 KRT82Q9NSB4 513 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 DNAJB12Q9NXW2 375 aaKnown RBP4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ADAM30Q9UKF2 790 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 PCDHB10Q9UN67 800 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CORINQ9Y5Q5 1042 aa4.89□□□□□ -1.63
RNU6-1249P-201ENST00000363237 A0A1W2PQU0 124 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SHTN1A0MZ66 631 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 NRG2O14511 850 aaPredicted RBP4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 BRINP1O60477 761 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SCGB1D2O95969 90 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CYP11A1P05108 521 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ATF3P18847 181 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CD33P20138 364 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CDK8P49336 464 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 FAM209AQ5JX71 171 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 PLPPR2Q96GM1 343 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 AARSD1Q9BTE6 412 aaKnown RBP4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 IGFLR1Q9H665 355 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ARHGEF4Q9NR80 690 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SLC5A4Q9NY91 659 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 PHF24Q9UPV7 400 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SPEF1Q9Y4P9 236 aa4.88□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ANKRD34BA5PLL1 514 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 GOLGA6CA6NDK9 693 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 GOLGA6BA6NDN3 693 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SOX1O00570 391 aaPredicted RBP4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 AKAP10O43572 662 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 KATNA1O75449 491 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 GOLGA6DP0CG33 693 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 RAG1P15918 1043 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SELPP16109 830 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SDSP20132 328 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 POU3F2P20265 443 aaPredicted RBP4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ARL4DP49703 201 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 RAB27AP51159 221 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SUMO1P63165 101 aaKnown RBP4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 INPP5AQ14642 412 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 DHCR24Q15392 516 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 VPS72Q15906 364 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 LONRF3Q496Y0 759 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 PPP4R4Q6NUP7 873 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 LRFN4Q6PJG9 635 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CYFIP1Q7L576 1253 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 PASD1Q8IV76 773 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ELMO3Q96BJ8 720 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ABHD17AQ96GS6 310 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CAMKK2Q96RR4 588 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ZNF700Q9H0M5 742 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ARNT2Q9HBZ2 717 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 GOLGA6AQ9NYA3 693 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ZIM2Q9NZV7 527 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 LRP2BPQ9P2M1 347 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 DNMT3LQ9UJW3 386 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 HCN2Q9UL51 889 aa4.87□□□□□ -1.63
RNU6-1249P-201ENST00000363237 H3BRJ5 948 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SIN3BO75182 1162 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 FGFR1P11362 822 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 FGFR3P22607 806 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CDC27P30260 824 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ITKQ08881 620 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 MTMR1Q13613 665 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SAFB2Q14151 953 aaKnown RBP eCLIP4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 BRD3Q15059 726 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 LRRC41Q15345 812 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 DBN1Q16643 649 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 C4orf46Q504U0 113 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TRIM61Q5EBN2 209 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ELMSAN1Q6PJG2 1045 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 STRA8Q7Z7C7 330 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 C14orf80Q86SX3 495 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 FAM35AQ86V20 835 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TICAM2Q86XR7 235 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 TRIM22Q8IYM9 498 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 LEO1Q8WVC0 666 aaPredicted RBP4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SMARCC1Q92922 1105 aaPredicted RBP4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 ZFP42Q96MM3 310 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CORO1BQ9BR76 489 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 LACRTQ9GZZ8 138 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 PUS7LQ9H0K6 701 aaKnown RBP4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CDH19Q9H159 772 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 FRRS1LQ9P0K9 344 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 KLHL3Q9UH77 587 aa4.86□□□□□ -1.63
RNU6-1249P-201ENST00000363237 SLC35F4A4IF30 521 aa4.85□□□□□ -1.63
RNU6-1249P-201ENST00000363237 CHURC1-FNTBB4DL54 471 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms