RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 NEBLO76041 1014 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 VIMP08670 466 aaKnown RBP17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 CCDC6Q16204 474 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 CFAP221Q4G0U5 840 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 CTNNBL1Q8WYA6 563 aaPredicted RBP17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 ZNF594Q96JF6 807 aaPredicted RBP17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 LRRC27Q9C0I9 530 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 ADCY10Q96PN6 1610 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 BTBD18B2RXH4 712 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 SSR1P43307 286 aaKnown RBP17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 NYAP1Q6ZVC0 841 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 IFIH1Q9BYX4 1025 aaKnown RBP17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 STMN4Q9H169 189 aaPredicted RBP17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 PPP6R2O75170 966 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 PDE4BQ07343 736 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 GPIHBP1Q8IV16 184 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 FMR1NBQ8N0W7 255 aaPredicted RBP17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 ACRBPQ8NEB7 543 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 KCNJ18B7U540 433 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 AP5Z1O43299 807 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 ERCC5P28715 1186 aaPredicted RBP17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 KCNJ12Q14500 433 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 TTC38Q5R3I4 469 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 LMBR1Q8WVP7 490 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 FERMT2Q96AC1 680 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 VAT1LQ9HCJ6 419 aa17.87■□□□□ 0.45
CLSTN1-201ENST00000361311 CALM1P0DP23 149 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 CALM2P0DP24 149 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 CALM3P0DP25 149 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 KIF23Q02241 960 aaPredicted RBP17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 MAGEB6Q8N7X4 407 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 TRIM58Q8NG06 486 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 FBF1Q8TES7 1133 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 SAMSN1Q9NSI8 373 aaKnown RBP17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 NEURL1BA8MQ27 555 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 KCTD16Q68DU8 428 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 ENOX1Q8TC92 643 aaKnown RBP17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 XAGE2Q96GT9 111 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 ZNF287Q9HBT7 754 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 MBD4O95243 580 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 GUCY2FP51841 1108 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 HSPA2P54652 639 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 LACTBP83111 547 aaPredicted RBP17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 NBPF14Q5TI25 921 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 TOGARAM2Q6ZUX3 1019 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 IP6K1Q92551 441 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 RASAL2Q9UJF2 1139 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 KDRP35968 1356 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 IQGAP3Q86VI3 1631 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 TMEM232C9JQI7 657 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 KRT13P13646 458 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 IQSEC2Q5JU85 1478 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 FMNL3Q8IVF7 1028 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 KLHL7Q8IXQ5 586 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 TMOD3Q9NYL9 352 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 SWAP70Q9UH65 585 aa17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 V9GY48 417 aaPredicted RBP17.86■□□□□ 0.45
CLSTN1-201ENST00000361311 LAMC1P11047 1609 aa17.85■□□□□ 0.45
CLSTN1-201ENST00000361311 UHRF1BP1LA0JNW5 1464 aa17.85■□□□□ 0.45
CLSTN1-201ENST00000361311 PDE4DQ08499 809 aa17.85■□□□□ 0.45
CLSTN1-201ENST00000361311 ZNF790Q6PG37 636 aa17.85■□□□□ 0.45
CLSTN1-201ENST00000361311 GNAT2P19087 354 aa17.85■□□□□ 0.45
CLSTN1-201ENST00000361311 FUCA2Q9BTY2 467 aa17.85■□□□□ 0.45
CLSTN1-201ENST00000361311 IQSEC3Q9UPP2 1182 aaPredicted RBP17.85■□□□□ 0.45
CLSTN1-201ENST00000361311 FGAP02671 866 aa17.85■□□□□ 0.45
CLSTN1-201ENST00000361311 MORC3Q14149 939 aa17.85■□□□□ 0.45
CLSTN1-201ENST00000361311 MIGA1Q8NAN2 632 aa17.85■□□□□ 0.45
CLSTN1-201ENST00000361311 HEATR3Q7Z4Q2 680 aa17.84■□□□□ 0.45
CLSTN1-201ENST00000361311 BPIFA3Q9BQP9 254 aa17.84■□□□□ 0.45
CLSTN1-201ENST00000361311 JPH2Q9BR39 696 aaPredicted RBP17.84■□□□□ 0.45
CLSTN1-201ENST00000361311 VEZTQ9HBM0 779 aa17.84■□□□□ 0.45
CLSTN1-201ENST00000361311 STX8Q9UNK0 236 aa17.84■□□□□ 0.45
CLSTN1-201ENST00000361311 CETN2P41208 172 aa17.84■□□□□ 0.45
CLSTN1-201ENST00000361311 SF3A3Q12874 501 aaKnown RBP eCLIP17.84■□□□□ 0.451e-8■■■□□ 18
CLSTN1-201ENST00000361311 NCAPH2Q6IBW4 605 aa17.84■□□□□ 0.45
CLSTN1-201ENST00000361311 PIK3AP1Q6ZUJ8 805 aa17.84■□□□□ 0.45
CLSTN1-201ENST00000361311 CCDC26Q8TAB7 109 aa17.84■□□□□ 0.45
CLSTN1-201ENST00000361311 RPAINQ86UA6 219 aa17.84■□□□□ 0.45
CLSTN1-201ENST00000361311 PANX2Q96RD6 677 aa17.84■□□□□ 0.45
CLSTN1-201ENST00000361311 MAN1B1Q9UKM7 699 aa17.84■□□□□ 0.45
CLSTN1-201ENST00000361311 TARBP1Q13395 1621 aaKnown RBP17.84■□□□□ 0.45
CLSTN1-201ENST00000361311 MADDQ8WXG6 1647 aa17.84■□□□□ 0.45
CLSTN1-201ENST00000361311 ZMYM6O95789 1325 aa17.83■□□□□ 0.45
CLSTN1-201ENST00000361311 KCNJ6P48051 423 aa17.83■□□□□ 0.45
CLSTN1-201ENST00000361311 TYW1BQ6NUM6 668 aa17.83■□□□□ 0.45
CLSTN1-201ENST00000361311 WDR24Q96S15 920 aa17.83■□□□□ 0.45
CLSTN1-201ENST00000361311 PAIP2Q9BPZ3 127 aaKnown RBP17.83■□□□□ 0.45
CLSTN1-201ENST00000361311 ABCA8O94911 1581 aa17.83■□□□□ 0.45
CLSTN1-201ENST00000361311 TCP1P17987 556 aaKnown RBP17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 RAPGEF1Q13905 1077 aa17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 SLC4A8Q2Y0W8 1093 aa17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 CACNA2D3Q8IZS8 1091 aa17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 HYOU1Q9Y4L1 999 aa17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 SASH1O94885 1247 aa17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 ZAP70P43403 619 aa17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 IFT88Q13099 833 aa17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 HELBQ8NG08 1087 aaPredicted RBP17.83■□□□□ 0.44
CLSTN1-201ENST00000361311 COPRSQ9NQ92 184 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms