RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 PLCD1P51178 756 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 IKQ13123 557 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-203ENST00000358544 CLUL1Q15846 466 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 UBL4BQ8N7F7 174 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 NUF2Q9BZD4 464 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 RTL9Q8NET4 1388 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 PPFIA2O75334 1257 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 HSPA1LP34931 641 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 TRAF1Q13077 416 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 SLC30A9Q6PML9 568 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 LRP2BPQ9P2M1 347 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 TPD52P55327 224 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-203ENST00000358544 OSBPL5Q9H0X9 879 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-203ENST00000358544 ARHGAP42A6NI28 874 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 ZNF213O14771 459 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 GJC1P36383 396 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 DRP2Q13474 957 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 SAMD1Q6SPF0 538 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-203ENST00000358544 NME9Q86XW9 330 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 USP27XA6NNY8 438 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 MAP3K12Q12852 859 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 SMC1BQ8NDV3 1235 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 SKIP12755 728 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 GSPT1P15170 499 aaKnown RBP6.74□□□□□ -1.33
VPS13B-203ENST00000358544 DHX9Q08211 1270 aaKnown RBP6.74□□□□□ -1.33
VPS13B-203ENST00000358544 PDCLQ13371 301 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 MAP7D1Q3KQU3 841 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 KCTD16Q68DU8 428 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 ACRBPQ8NEB7 543 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 PUS7Q96PZ0 661 aaKnown RBP6.74□□□□□ -1.33
VPS13B-203ENST00000358544 HIBCHQ6NVY1 386 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-203ENST00000358544 SYCE1Q8N0S2 351 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 MORC4Q8TE76 937 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 SNAPC4Q5SXM2 1469 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 ZBTB7BO15156 539 aaPredicted RBP6.74□□□□□ -1.33
VPS13B-203ENST00000358544 MAP3K7O43318 606 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 RNF8O76064 485 aa6.74□□□□□ -1.33
VPS13B-203ENST00000358544 CMA1P23946 247 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 TCERG1LQ5VWI1 586 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 PSMB7Q99436 277 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 KIAA1468Q9P260 1216 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 SBNO1A3KN83 1393 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 IKBKBO14920 756 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 TROVE2P10155 538 aaKnown RBP eCLIP6.73□□□□□ -1.338e-10■■■■■ 45.1
VPS13B-203ENST00000358544 PSMC4P43686 418 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 CUL4AQ13619 759 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 SFMBT2Q5VUG0 894 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 SPDL1Q96EA4 605 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 MTUS1Q9ULD2 1270 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 PLAAQ9Y263 795 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 HSP90AA5PQ58FG0 334 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 NLRP14Q86W24 1093 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 WHAMMQ8TF30 809 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 ZDBF2Q9HCK1 2354 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 PRDM2Q13029 1718 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 RASSF10A6NK89 507 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 ME3Q16798 604 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 OTUD7BQ6GQQ9 843 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 PDCD7Q8N8D1 485 aaKnown RBP6.73□□□□□ -1.33
VPS13B-203ENST00000358544 CD2APQ9Y5K6 639 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 TEX14Q8IWB6 1497 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 MCM7P33993 719 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 SNRKQ9NRH2 765 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 HDAC9Q9UKV0 1011 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 KCNJ18B7U540 433 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 PPP1R12AO14974 1030 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-203ENST00000358544 EEF2P13639 858 aaKnown RBP6.73□□□□□ -1.33
VPS13B-203ENST00000358544 KCNJ12Q14500 433 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 ANKRD65E5RJM6 399 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 AMOTQ4VCS5 1084 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 SARM1Q6SZW1 724 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 VPS16Q9H269 839 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 KLC4Q9NSK0 619 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 JAK2O60674 1132 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 TYW1BQ6NUM6 668 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 PANX2Q96RD6 677 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 ZNF692Q9BU19 519 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-203ENST00000358544 HNRNPH1P31943 449 aaKnown RBP6.73□□□□□ -1.33
VPS13B-203ENST00000358544 ZNF76P36508 570 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 PPP2R5EQ16537 467 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 KLHDC4Q8TBB5 520 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 CNNM2Q9H8M5 875 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 FANCLQ9NW38 375 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 DBF4Q9UBU7 674 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-203ENST00000358544 PER1O15534 1290 aaPredicted RBP6.73□□□□□ -1.33
VPS13B-203ENST00000358544 VAMP4O75379 141 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 CUL3Q13618 768 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 WTAPQ15007 396 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 OR8K1Q8NGG5 319 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 MYD88Q99836 296 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 NOC4LQ9BVI4 516 aaKnown RBP6.73□□□□□ -1.33
VPS13B-203ENST00000358544 NUP58Q9BVL2 599 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 HAUS2Q9NVX0 235 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 CFAP157Q5JU67 520 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 FBXW10Q5XX13 1052 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 STXBP4Q6ZWJ1 553 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 TM6SF1Q9BZW5 370 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 TTC21BQ7Z4L5 1316 aa6.73□□□□□ -1.33
VPS13B-203ENST00000358544 TADA3O75528 432 aa6.72□□□□□ -1.33
VPS13B-203ENST00000358544 MYL6BP14649 208 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms