RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 RBM46Q8TBY0 533 aaKnown RBP21.12■□□□□ 0.97
SDCBP2-201ENST00000339987 PLIN4Q96Q06 1357 aa21.12■□□□□ 0.97
SDCBP2-201ENST00000339987 WDR19Q8NEZ3 1342 aa21.11■□□□□ 0.97
SDCBP2-201ENST00000339987 PPP1R12BO60237 982 aaPredicted RBP21.11■□□□□ 0.97
SDCBP2-201ENST00000339987 TOMM70O94826 608 aa21.11■□□□□ 0.97
SDCBP2-201ENST00000339987 CASTP20810 708 aaKnown RBP21.11■□□□□ 0.97
SDCBP2-201ENST00000339987 MCM5P33992 734 aa21.11■□□□□ 0.97
SDCBP2-201ENST00000339987 DHX32Q7L7V1 743 aaKnown RBP21.11■□□□□ 0.97
SDCBP2-201ENST00000339987 IL27Q8NEV9 243 aa21.11■□□□□ 0.97
SDCBP2-201ENST00000339987 NEDD1Q8NHV4 660 aa21.11■□□□□ 0.97
SDCBP2-201ENST00000339987 NKX2-3Q8TAU0 364 aa21.11■□□□□ 0.97
SDCBP2-201ENST00000339987 ZSWIM5Q9P217 1185 aa21.11■□□□□ 0.97
SDCBP2-201ENST00000339987 TSPY2A6NKD2 308 aa21.1■□□□□ 0.97
SDCBP2-201ENST00000339987 USP2O75604 605 aaPredicted RBP21.1■□□□□ 0.97
SDCBP2-201ENST00000339987 AKR1B1P15121 316 aa21.1■□□□□ 0.97
SDCBP2-201ENST00000339987 RPS6KB1P23443 525 aa21.1■□□□□ 0.97
SDCBP2-201ENST00000339987 TFAP4Q01664 338 aa21.1■□□□□ 0.97
SDCBP2-201ENST00000339987 RRP1BQ14684 758 aaKnown RBP21.1■□□□□ 0.97
SDCBP2-201ENST00000339987 RABEP1Q15276 862 aa21.1■□□□□ 0.97
SDCBP2-201ENST00000339987 RUFY3Q7L099 469 aa21.1■□□□□ 0.97
SDCBP2-201ENST00000339987 KLRG1Q96E93 195 aa21.1■□□□□ 0.97
SDCBP2-201ENST00000339987 MTA3Q9BTC8 594 aa21.1■□□□□ 0.97
SDCBP2-201ENST00000339987 GINM1Q9NU53 330 aa21.1■□□□□ 0.97
SDCBP2-201ENST00000339987 CYP46A1Q9Y6A2 500 aa21.1■□□□□ 0.97
SDCBP2-201ENST00000339987 GREB1LQ9C091 1923 aaPredicted RBP21.09■□□□□ 0.97
SDCBP2-201ENST00000339987 CTNND1O60716 968 aaKnown RBP21.09■□□□□ 0.97
SDCBP2-201ENST00000339987 TSPY3P0CV98 308 aa21.09■□□□□ 0.97
SDCBP2-201ENST00000339987 TSPY8P0CW00 308 aa21.09■□□□□ 0.97
SDCBP2-201ENST00000339987 CAP2P40123 477 aa21.09■□□□□ 0.97
SDCBP2-201ENST00000339987 EXOSC10Q01780 885 aaKnown RBP21.09■□□□□ 0.97
SDCBP2-201ENST00000339987 COL9A3Q14050 684 aaPredicted RBP21.09■□□□□ 0.97
SDCBP2-201ENST00000339987 MAP3K11Q16584 847 aa21.09■□□□□ 0.97
SDCBP2-201ENST00000339987 FAM47AQ5JRC9 791 aa21.09■□□□□ 0.97
SDCBP2-201ENST00000339987 CYB5R4Q7L1T6 521 aa21.09■□□□□ 0.97
SDCBP2-201ENST00000339987 TCP11L1Q9NUJ3 509 aa21.09■□□□□ 0.97
SDCBP2-201ENST00000339987 PAPPA2Q9BXP8 1791 aa21.09■□□□□ 0.97
SDCBP2-201ENST00000339987 ANTXR2P58335 489 aa21.08■□□□□ 0.97
SDCBP2-201ENST00000339987 FKBP1BP68106 108 aa21.08■□□□□ 0.97
SDCBP2-201ENST00000339987 ABCB5Q2M3G0 1257 aa21.08■□□□□ 0.97
SDCBP2-201ENST00000339987 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.08■□□□□ 0.97
SDCBP2-201ENST00000339987 WRNIP1Q96S55 665 aa21.08■□□□□ 0.97
SDCBP2-201ENST00000339987 UPF3BQ9BZI7 483 aaKnown RBP21.08■□□□□ 0.97
SDCBP2-201ENST00000339987 IGKV6D-41A0A0C4DH26 115 aa21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 PRC1O43663 620 aa21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 GDF11O95390 407 aa21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 CPA1P15085 419 aa21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 IREB2P48200 963 aaKnown RBP21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 FMR1Q06787 632 aaKnown RBP eCLIP21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 CCDC178Q5BJE1 867 aa21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 NOL9Q5SY16 702 aaKnown RBP21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 TMEM179Q6ZVK1 233 aa21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 ARMC9Q7Z3E5 817 aa21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 IQCA1Q86XH1 822 aa21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 CABP5Q9NP86 173 aa21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 TRPM7Q96QT4 1865 aa21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 PASKQ96RG2 1323 aa21.07■□□□□ 0.96
SDCBP2-201ENST00000339987 GH2P01242 217 aa21.06■□□□□ 0.96
SDCBP2-201ENST00000339987 JAG1P78504 1218 aa21.06■□□□□ 0.96
SDCBP2-201ENST00000339987 TMEM87BQ96K49 555 aa21.06■□□□□ 0.96
SDCBP2-201ENST00000339987 ZBTB21Q9ULJ3 1066 aa21.06■□□□□ 0.96
SDCBP2-201ENST00000339987 ANGEL1Q9UNK9 670 aaKnown RBP21.06■□□□□ 0.96
SDCBP2-201ENST00000339987 DOCK1Q14185 1865 aa21.06■□□□□ 0.96
SDCBP2-201ENST00000339987 UNCXA6NJT0 531 aa21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 MPHOSPH10O00566 681 aaKnown RBP21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 CELF2O95319 508 aaKnown RBP21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 ASNSP08243 561 aa21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 INPP5BP32019 993 aa21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 MAP3K9P80192 1104 aa21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 FSTL1Q12841 308 aa21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 PRKG1Q13976 671 aa21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 SART3Q15020 963 aaKnown RBP21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 PPP4R3BQ5MIZ7 849 aa21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 SCYL3Q8IZE3 742 aa21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 FBXL16Q8N461 479 aa21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 ZSCAN10Q96SZ4 725 aaPredicted RBP21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 UBAC1Q9BSL1 405 aa21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 ALDH8A1Q9H2A2 487 aaPredicted RBP21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 ZNF408Q9H9D4 720 aa21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 GBA2Q9HCG7 927 aaPredicted RBP21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 FZD1Q9UP38 647 aa21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 OTOFQ9HC10 1997 aa21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 ATAD5Q96QE3 1844 aa21.05■□□□□ 0.96
SDCBP2-201ENST00000339987 GUCY1A2P33402 732 aa21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 NOVP48745 357 aa21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 NEK4P51957 841 aa21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 TTLL12Q14166 644 aaPredicted RBP21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 CHST3Q7LGC8 479 aa21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 TTC14Q96N46 770 aa21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 KANSL2Q9H9L4 492 aa21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 IL17RBQ9NRM6 502 aa21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 PDRG1Q9NUG6 133 aa21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 SEC23AQ15436 765 aa21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 SHROOM1Q2M3G4 852 aaPredicted RBP21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 ANKRD13AQ8IZ07 590 aa21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 IGDCC4Q8TDY8 1250 aa21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 ANKS1AQ92625 1134 aa21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 AGXT2Q9BYV1 514 aa21.04■□□□□ 0.96
SDCBP2-201ENST00000339987 TNKSO95271 1327 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms