RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 TYW1Q9NV66 732 aaKnown RBP6.82□□□□□ -1.32
CSMD1-201ENST00000335551 NAPAP54920 295 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 CASC4Q6P4E1 433 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 NUDCD3Q8IVD9 361 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 MAP7D3Q8IWC1 876 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 TRIM42Q8IWZ5 723 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 BCAS4Q8TDM0 211 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 Q6ZUG5 572 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 BRF1Q92994 677 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 RTEL1-TNFRSF6BF6WH68 1400 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 ZNF449Q6P9G9 518 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 TNFAIP3P21580 790 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 CDR2Q01850 454 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 MMEL1Q495T6 779 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 CCDC159P0C7I6 412 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 NMIQ13287 307 aaPredicted RBP6.82□□□□□ -1.32
CSMD1-201ENST00000335551 PDXDC1Q6P996 788 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 CCDC84Q86UT8 332 aaPredicted RBP6.82□□□□□ -1.32
CSMD1-201ENST00000335551 MICAL3Q7RTP6 2002 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 IL9RQ01113 521 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 OGFOD1Q8N543 542 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 SAAL1Q96ER3 474 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 PPP1R12AO14974 1030 aaPredicted RBP6.82□□□□□ -1.32
CSMD1-201ENST00000335551 TSPY3P0CV98 308 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 TSPY8P0CW00 308 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 KRT5P13647 590 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 IFT88Q13099 833 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 SPC25Q9HBM1 224 aa6.82□□□□□ -1.32
CSMD1-201ENST00000335551 TRIM37O94972 964 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 PLCB4Q15147 1175 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 C6orf118Q5T5N4 469 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 KRT80Q6KB66 452 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 RABGGTAQ92696 567 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 TEKT2Q9UIF3 430 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 ZNF500O60304 480 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-201ENST00000335551 SKOR1P84550 965 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 TMTC3Q6ZXV5 915 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 ENAHQ8N8S7 591 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-201ENST00000335551 RIC8AQ9NPQ8 531 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 TAF11Q15544 211 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 TRIM31Q9BZY9 425 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 TRIM6Q9C030 488 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-201ENST00000335551 VPS37BQ9H9H4 285 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 GNAT2P19087 354 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 SMTNP53814 917 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 IQGAP2Q13576 1575 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 CEP19Q96LK0 163 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 OLFM3Q96PB7 478 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 SPDYE3A6NKU9 549 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 THAP12O43422 761 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 EXOC4Q96A65 974 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 PPWD1Q96BP3 646 aaKnown RBP6.81□□□□□ -1.32
CSMD1-201ENST00000335551 MIS12Q9H081 205 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 RRAGDQ9NQL2 400 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-201ENST00000335551 KRT10P13645 584 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 FANCCQ00597 558 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 GABPAQ06546 454 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 ZGPATQ8N5A5 531 aaKnown RBP6.81□□□□□ -1.32
CSMD1-201ENST00000335551 BBOF1Q8ND07 529 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 PACSIN2Q9UNF0 486 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-201ENST00000335551 LAMC3Q9Y6N6 1575 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 TRAF5O00463 557 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 SDSP20132 328 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 EEF1B2P24534 225 aaKnown RBP6.81□□□□□ -1.32
CSMD1-201ENST00000335551 MAN1A1P33908 653 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 POLE2P56282 527 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 SFMBT2Q5VUG0 894 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 PIP4K2CQ8TBX8 421 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 DIABLOQ9NR28 239 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 IL16Q14005 1332 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 RASGRF2O14827 1237 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 IRX5P78411 483 aaPredicted RBP6.81□□□□□ -1.32
CSMD1-201ENST00000335551 FGFR1OP2Q9NVK5 253 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 LDHCP07864 332 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 CCT5P48643 541 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 ESYT1Q9BSJ8 1104 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 SPZ1Q9BXG8 430 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 WWC3Q9ULE0 1092 aa6.81□□□□□ -1.32
CSMD1-201ENST00000335551 CCDC138Q96M89 665 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 TTC41PQ6P2S7 1318 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 TBC1D8BQ0IIM8 1120 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 DTHD1Q6ZMT9 781 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 LRRC8CQ8TDW0 803 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 TSC1Q92574 1164 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 CLSTN2Q9H4D0 955 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 NOP53Q9NZM5 478 aaKnown RBP6.8□□□□□ -1.32
CSMD1-201ENST00000335551 ATP1A2P50993 1020 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 HNRNPCL2B2RXH8 293 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 HNRNPCL1O60812 293 aaKnown RBP6.8□□□□□ -1.32
CSMD1-201ENST00000335551 HAND2P61296 217 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 OCA2Q04671 838 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 ZC3H18Q86VM9 953 aaKnown RBP6.8□□□□□ -1.32
CSMD1-201ENST00000335551 SCYL3Q8IZE3 742 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 CEP70Q8NHQ1 597 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 SERPINB10P48595 397 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 GUCY2FP51841 1108 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 IRX1P78414 480 aaPredicted RBP6.8□□□□□ -1.32
CSMD1-201ENST00000335551 SV2BQ7L1I2 683 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 KLHL7Q8IXQ5 586 aa6.8□□□□□ -1.32
CSMD1-201ENST00000335551 PDE11AQ9HCR9 933 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms