RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 FGD1P98174 961 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 GABPAQ06546 454 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 TTLL12Q14166 644 aaPredicted RBP6.08□□□□□ -1.44
LRIT3-201ENST00000327908 CREB3L3Q68CJ9 461 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 CTR9Q6PD62 1173 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 SAMD7Q7Z3H4 446 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 FAM160B2Q86V87 743 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 ZNF713Q8N859 430 aaPredicted RBP6.08□□□□□ -1.44
LRIT3-201ENST00000327908 FAM227BQ96M60 508 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.08□□□□□ -1.44
LRIT3-201ENST00000327908 TSPY2A6NKD2 308 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 TMEM88BA6NKF7 163 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 CA12O43570 354 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 FGAP02671 866 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 LIFRP42702 1097 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 GTF2A2P52657 109 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 DYNLL1P63167 89 aaKnown RBP6.08□□□□□ -1.44
LRIT3-201ENST00000327908 PICALMQ13492 652 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 TSHZ3Q63HK5 1081 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 PROCA1Q8NCQ7 364 aaPredicted RBP6.08□□□□□ -1.44
LRIT3-201ENST00000327908 NEK1Q96PY6 1258 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 USP26Q9BXU7 913 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 BACH2Q9BYV9 841 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 CREBZFQ9NS37 354 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 CNTNAP1P78357 1384 aa6.08□□□□□ -1.44
LRIT3-201ENST00000327908 CLRN2A0PK11 232 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 SLC27A2O14975 620 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 CDK8P49336 464 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 NECTIN1Q15223 517 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 GPATCH4Q5T3I0 446 aaKnown RBP6.07□□□□□ -1.44
LRIT3-201ENST00000327908 DHX32Q7L7V1 743 aaKnown RBP6.07□□□□□ -1.44
LRIT3-201ENST00000327908 C12orf42Q96LP6 360 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 C22orf23Q9BZE7 217 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 DOCK1Q14185 1865 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 MINDY4BA8MYZ0 360 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 TTLL1O95922 423 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 CETPP11597 493 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 NBPF9Q3BBW0 867 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 ASPRV1Q53RT3 343 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 CATIPQ7Z7H3 387 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 WASF1Q92558 559 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 EDC3Q96F86 508 aaKnown RBP6.07□□□□□ -1.44
LRIT3-201ENST00000327908 JAG2Q9Y219 1238 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 SPDYE5A6NIY4 337 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 KIF3CO14782 793 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 OSBPP22059 807 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 CAP2P40123 477 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 SNAPC2Q13487 334 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 TKFCQ3LXA3 575 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 LDLRAD1Q5T700 205 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 VPS53Q5VIR6 699 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 MB21D1Q8N884 522 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 GMCL1P1Q8NEA9 526 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 CHURC1Q8WUH1 139 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 MKL1Q969V6 931 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 SLC10A4Q96EP9 437 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 KCNQ5Q9NR82 932 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 TOMM22Q9NS69 142 aa6.07□□□□□ -1.44
LRIT3-201ENST00000327908 CCDC69A6NI79 296 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 WDR46O15213 610 aaKnown RBP6.06□□□□□ -1.44
LRIT3-201ENST00000327908 KIAA1683Q9H0B3 1180 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 KAT14Q9H8E8 782 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 TLL2Q9Y6L7 1015 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 PASKQ96RG2 1323 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 NID2Q14112 1375 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 NOGQ13253 232 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 WTAPQ15007 396 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 SH3D19Q5HYK7 790 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.06□□□□□ -1.44
LRIT3-201ENST00000327908 MXD3Q9BW11 206 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 CTDP1Q9Y5B0 961 aaPredicted RBP6.06□□□□□ -1.44
LRIT3-201ENST00000327908 CDK5RAP2Q96SN8 1893 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 MYH8P13535 1937 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 POTECB2RU33 542 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 B4DLN1 442 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 MRPL12P52815 198 aaKnown RBP6.06□□□□□ -1.44
LRIT3-201ENST00000327908 ICA1Q05084 483 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 C8orf34Q49A92 452 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 ZNF784Q8NCA9 323 aaPredicted RBP6.06□□□□□ -1.44
LRIT3-201ENST00000327908 ZNF384Q8TF68 577 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 CCDC12Q8WUD4 166 aaPredicted RBP6.06□□□□□ -1.44
LRIT3-201ENST00000327908 KLRG1Q96E93 195 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 TEPSINQ96N21 525 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 FEZ1Q99689 392 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 EPB41L4AQ9HCS5 686 aaPredicted RBP6.06□□□□□ -1.44
LRIT3-201ENST00000327908 NMRK2Q9NPI5 230 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 ZBTB21Q9ULJ3 1066 aa6.06□□□□□ -1.44
LRIT3-201ENST00000327908 LOC102724159A0A0B4J2E5 919 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 CELF2O95319 508 aaKnown RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 XBP1P17861 261 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 MAP2K2P36507 400 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 HIRAP54198 1017 aaPredicted RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 PWP2Q15269 919 aaKnown RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 GRIK5Q16478 980 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 ZNF589Q86UQ0 364 aaPredicted RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 SGMS1Q86VZ5 419 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 CTCFLQ8NI51 663 aaPredicted RBP6.05□□□□□ -1.44
LRIT3-201ENST00000327908 GMCL1Q96IK5 515 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 TBC1D32Q96NH3 1257 aa6.05□□□□□ -1.44
LRIT3-201ENST00000327908 WRNIP1Q96S55 665 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms