RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 TTLL11Q8NHH1 800 aa17.24■□□□□ 0.35
VARS2-201ENST00000321897 TMEM87BQ96K49 555 aa17.24■□□□□ 0.35
VARS2-201ENST00000321897 CDC42BPGQ6DT37 1551 aa17.24■□□□□ 0.35
VARS2-201ENST00000321897 TMTC2Q8N394 836 aa17.24■□□□□ 0.35
VARS2-201ENST00000321897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.24■□□□□ 0.35
VARS2-201ENST00000321897 AP5Z1O43299 807 aa17.23■□□□□ 0.35
VARS2-201ENST00000321897 CHRNDQ07001 517 aa17.23■□□□□ 0.35
VARS2-201ENST00000321897 TAB2Q9NYJ8 693 aa17.23■□□□□ 0.35
VARS2-201ENST00000321897 HEG1Q9ULI3 1381 aa17.23■□□□□ 0.35
VARS2-201ENST00000321897 NCOA3Q9Y6Q9 1424 aa17.23■□□□□ 0.35
VARS2-201ENST00000321897 MAP3K15Q6ZN16 1313 aa17.23■□□□□ 0.35
VARS2-201ENST00000321897 EBAG9O00559 213 aa17.23■□□□□ 0.35
VARS2-201ENST00000321897 RASGRF1Q13972 1273 aa17.23■□□□□ 0.35
VARS2-201ENST00000321897 HDXQ7Z353 690 aa17.23■□□□□ 0.35
VARS2-201ENST00000321897 ATRIPQ8WXE1 791 aa17.23■□□□□ 0.35
VARS2-201ENST00000321897 MRFAP1L1Q96HT8 127 aa17.23■□□□□ 0.35
VARS2-201ENST00000321897 BAG3O95817 575 aa17.23■□□□□ 0.35
VARS2-201ENST00000321897 MYOM1P52179 1685 aa17.23■□□□□ 0.35
VARS2-201ENST00000321897 UBXN1Q04323 297 aa17.22■□□□□ 0.35
VARS2-201ENST00000321897 TBC1D10CQ8IV04 446 aa17.22■□□□□ 0.35
VARS2-201ENST00000321897 IGSF22Q8N9C0 903 aa17.22■□□□□ 0.35
VARS2-201ENST00000321897 LINC00301Q8NCQ3 95 aa17.22■□□□□ 0.35
VARS2-201ENST00000321897 TRIM66O15016 1216 aa17.22■□□□□ 0.35
VARS2-201ENST00000321897 PPARAQ07869 468 aa17.22■□□□□ 0.35
VARS2-201ENST00000321897 TPTE2Q6XPS3 522 aa17.22■□□□□ 0.35
VARS2-201ENST00000321897 BRINP3Q76B58 766 aa17.22■□□□□ 0.35
VARS2-201ENST00000321897 BMP2KQ9NSY1 1161 aaPredicted RBP17.22■□□□□ 0.35
VARS2-201ENST00000321897 HIBADHP31937 336 aaKnown RBP17.22■□□□□ 0.35
VARS2-201ENST00000321897 NLRP12P59046 1061 aa17.22■□□□□ 0.35
VARS2-201ENST00000321897 POSTNQ15063 836 aa17.22■□□□□ 0.35
VARS2-201ENST00000321897 GPCPD1Q9NPB8 672 aa17.22■□□□□ 0.35
VARS2-201ENST00000321897 WDR17Q8IZU2 1322 aa17.22■□□□□ 0.35
VARS2-201ENST00000321897 UBAP1LF5GYI3 381 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 DEXIO95424 95 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 YEATS4O95619 227 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 ANKRD7Q92527 254 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 SENP2Q9HC62 589 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 RRP15Q9Y3B9 282 aaKnown RBP17.21■□□□□ 0.35
VARS2-201ENST00000321897 NRKQ7Z2Y5 1582 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 LIG3P49916 1009 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 TFAP4Q01664 338 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 RILPL1Q5EBL4 403 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 ATG9AQ7Z3C6 839 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 TGFBRAP1Q8WUH2 860 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 BAZ2BQ9UIF8 2168 aaKnown RBP17.21■□□□□ 0.35
VARS2-201ENST00000321897 LDHBP07195 334 aaKnown RBP17.21■□□□□ 0.35
VARS2-201ENST00000321897 CRKLP46109 303 aaKnown RBP17.21■□□□□ 0.35
VARS2-201ENST00000321897 NOSTRINQ8IVI9 506 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 FANCBQ8NB91 859 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 CPVLQ9H3G5 476 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 RCOR1Q9UKL0 485 aa17.21■□□□□ 0.35
VARS2-201ENST00000321897 NPHP4O75161 1426 aaPredicted RBP17.21■□□□□ 0.35
VARS2-201ENST00000321897 POTEB2H3BUK9 544 aa17.21■□□□□ 0.34
VARS2-201ENST00000321897 HLTFQ14527 1009 aaKnown RBP eCLIP17.21■□□□□ 0.34
VARS2-201ENST00000321897 CYB5R4Q7L1T6 521 aa17.21■□□□□ 0.34
VARS2-201ENST00000321897 MYO1CO00159 1063 aa17.2■□□□□ 0.34
VARS2-201ENST00000321897 FOXO4P98177 505 aa17.2■□□□□ 0.34
VARS2-201ENST00000321897 KIF23Q02241 960 aaPredicted RBP17.2■□□□□ 0.34
VARS2-201ENST00000321897 SPA17Q15506 151 aa17.2■□□□□ 0.34
VARS2-201ENST00000321897 SUSD4Q5VX71 490 aa17.2■□□□□ 0.34
VARS2-201ENST00000321897 MROH1Q8NDA8 1641 aa17.2■□□□□ 0.34
VARS2-201ENST00000321897 LOC102724428A0A0B4J2F2 783 aa17.2■□□□□ 0.34
VARS2-201ENST00000321897 AKR1B10O60218 316 aa17.2■□□□□ 0.34
VARS2-201ENST00000321897 SIK1P57059 783 aa17.2■□□□□ 0.34
VARS2-201ENST00000321897 WWC2Q6AWC2 1192 aa17.2■□□□□ 0.34
VARS2-201ENST00000321897 RTCBQ9Y3I0 505 aaKnown RBP17.2■□□□□ 0.34
VARS2-201ENST00000321897 SLFN14P0C7P3 912 aa17.2■□□□□ 0.34
VARS2-201ENST00000321897 ADD2P35612 726 aa17.2■□□□□ 0.34
VARS2-201ENST00000321897 CEP112Q8N8E3 955 aa17.2■□□□□ 0.34
VARS2-201ENST00000321897 FOXN1O15353 648 aa17.19■□□□□ 0.34
VARS2-201ENST00000321897 RNASE9P60153 205 aaKnown RBP17.19■□□□□ 0.34
VARS2-201ENST00000321897 CCDC40Q4G0X9 1142 aa17.19■□□□□ 0.34
VARS2-201ENST00000321897 MORC2Q9Y6X9 1032 aaPredicted RBP17.19■□□□□ 0.34
VARS2-201ENST00000321897 TTC38Q5R3I4 469 aa17.19■□□□□ 0.34
VARS2-201ENST00000321897 TTC19Q6DKK2 380 aaPredicted RBP17.19■□□□□ 0.34
VARS2-201ENST00000321897 DYMQ7RTS9 669 aa17.19■□□□□ 0.34
VARS2-201ENST00000321897 MAATS1Q7Z4T9 603 aa17.19■□□□□ 0.34
VARS2-201ENST00000321897 PCDHB6Q9Y5E3 794 aa17.19■□□□□ 0.34
VARS2-201ENST00000321897 ZNF609O15014 1411 aa17.19■□□□□ 0.34
VARS2-201ENST00000321897 TXKP42681 527 aa17.18■□□□□ 0.34
VARS2-201ENST00000321897 KANK3Q6NY19 840 aa17.18■□□□□ 0.34
VARS2-201ENST00000321897 EXOC1Q9NV70 894 aa17.18■□□□□ 0.34
VARS2-201ENST00000321897 TBC1D7Q9P0N9 293 aa17.18■□□□□ 0.34
VARS2-201ENST00000321897 MACROD2A1Z1Q3 448 aa17.18■□□□□ 0.34
VARS2-201ENST00000321897 GNAT2P19087 354 aa17.18■□□□□ 0.34
VARS2-201ENST00000321897 CDC27P30260 824 aa17.18■□□□□ 0.34
VARS2-201ENST00000321897 IQUBQ8NA54 791 aa17.18■□□□□ 0.34
VARS2-201ENST00000321897 CCDC113Q9H0I3 377 aa17.18■□□□□ 0.34
VARS2-201ENST00000321897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.18■□□□□ 0.345e-7■■□□□ 12.2
VARS2-201ENST00000321897 SALL3Q9BXA9 1300 aa17.18■□□□□ 0.34
VARS2-201ENST00000321897 DTHD1Q6ZMT9 781 aa17.18■□□□□ 0.34
VARS2-201ENST00000321897 SRP68Q9UHB9 627 aaKnown RBP17.18■□□□□ 0.34
VARS2-201ENST00000321897 FAN1Q9Y2M0 1017 aa17.18■□□□□ 0.34
VARS2-201ENST00000321897 ARHGAP6O43182 974 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 CUTAO60888 179 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 ST5P78524 1137 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 USPL1Q5W0Q7 1092 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 CCNL1Q9UK58 526 aaPredicted RBP17.17■□□□□ 0.34
VARS2-201ENST00000321897 PPP2R2CQ9Y2T4 447 aa17.17■□□□□ 0.34
VARS2-201ENST00000321897 NMT2O60551 498 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms