RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 MAN1A1P33908 653 aa16.46■□□□□ 0.23
SCN3B-201ENST00000299333 LIN9Q5TKA1 542 aa16.46■□□□□ 0.23
SCN3B-201ENST00000299333 TYW1BQ6NUM6 668 aa16.46■□□□□ 0.23
SCN3B-201ENST00000299333 RPGRIP1Q96KN7 1286 aa16.46■□□□□ 0.23
SCN3B-201ENST00000299333 HAUS7Q99871 368 aa16.46■□□□□ 0.23
SCN3B-201ENST00000299333 IFIH1Q9BYX4 1025 aaKnown RBP16.46■□□□□ 0.23
SCN3B-201ENST00000299333 MIGA1Q8NAN2 632 aa16.46■□□□□ 0.23
SCN3B-201ENST00000299333 LONRF2Q1L5Z9 754 aa16.46■□□□□ 0.23
SCN3B-201ENST00000299333 RAB17Q9H0T7 212 aa16.46■□□□□ 0.23
SCN3B-201ENST00000299333 KLHL30Q0D2K2 578 aa16.46■□□□□ 0.23
SCN3B-201ENST00000299333 E2F4Q16254 413 aa16.46■□□□□ 0.23
SCN3B-201ENST00000299333 SYCE1Q8N0S2 351 aa16.46■□□□□ 0.23
SCN3B-201ENST00000299333 IL15P40933 162 aaPredicted RBP16.45■□□□□ 0.22
SCN3B-201ENST00000299333 OTUD7BQ6GQQ9 843 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 HOMER3Q9NSC5 361 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 SATB2Q9UPW6 733 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 TRAF1Q13077 416 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 NCOA5Q9HCD5 579 aaKnown RBP16.45■□□□□ 0.22
SCN3B-201ENST00000299333 WWC3Q9ULE0 1092 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 CASC4Q6P4E1 433 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 CCDC13Q8IYE1 715 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 EFCC1Q9HA90 598 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 LARSQ9P2J5 1176 aaKnown RBP16.45■□□□□ 0.22
SCN3B-201ENST00000299333 AFG3L2Q9Y4W6 797 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 CA8P35219 290 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 RANBP1P43487 201 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 HINFPQ9BQA5 517 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 MED4Q9NPJ6 270 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 IFT88Q13099 833 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 FNBP1Q96RU3 617 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 POLKQ9UBT6 870 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 MKL2Q9ULH7 1088 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 TRIM35Q9UPQ4 493 aa16.45■□□□□ 0.22
SCN3B-201ENST00000299333 SEC31AO94979 1220 aaKnown RBP16.44■□□□□ 0.22
SCN3B-201ENST00000299333 XAGE3Q8WTP9 111 aa16.44■□□□□ 0.22
SCN3B-201ENST00000299333 CUTAO60888 179 aa16.44■□□□□ 0.22
SCN3B-201ENST00000299333 PIK3AP1Q6ZUJ8 805 aa16.44■□□□□ 0.22
SCN3B-201ENST00000299333 MPHOSPH6Q99547 160 aaKnown RBP16.44■□□□□ 0.22
SCN3B-201ENST00000299333 SERPINB6P35237 376 aa16.44■□□□□ 0.22
SCN3B-201ENST00000299333 JPH2Q9BR39 696 aaPredicted RBP16.44■□□□□ 0.22
SCN3B-201ENST00000299333 ZBTB40Q9NUA8 1239 aa16.44■□□□□ 0.22
SCN3B-201ENST00000299333 PARP2Q9UGN5 583 aa16.44■□□□□ 0.22
SCN3B-201ENST00000299333 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.44■□□□□ 0.22
SCN3B-201ENST00000299333 F8W031 263 aaPredicted RBP16.44■□□□□ 0.22
SCN3B-201ENST00000299333 KCTD16Q68DU8 428 aa16.44■□□□□ 0.22
SCN3B-201ENST00000299333 EFCAB13Q8IY85 973 aa16.44■□□□□ 0.22
SCN3B-201ENST00000299333 MAGEB6Q8N7X4 407 aa16.44■□□□□ 0.22
SCN3B-201ENST00000299333 HVCN1Q96D96 273 aa16.44■□□□□ 0.22
SCN3B-201ENST00000299333 DISP3Q9P2K9 1392 aa16.44■□□□□ 0.22
SCN3B-201ENST00000299333 HARSP12081 509 aaKnown RBP16.43■□□□□ 0.22
SCN3B-201ENST00000299333 POSTNQ15063 836 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 NELFBQ8WX92 580 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 SNRPA1P09661 255 aaKnown RBP16.43■□□□□ 0.22
SCN3B-201ENST00000299333 CCDC152Q4G0S7 254 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 SFMBT2Q5VUG0 894 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 CDC37L1Q7L3B6 337 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 PPP2R2CQ9Y2T4 447 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 UHMK1Q8TAS1 419 aaKnown RBP16.43■□□□□ 0.22
SCN3B-201ENST00000299333 TRIM6Q9C030 488 aaPredicted RBP16.43■□□□□ 0.22
SCN3B-201ENST00000299333 MRPL46Q9H2W6 279 aaKnown RBP16.43■□□□□ 0.22
SCN3B-201ENST00000299333 CC2D2AQ9P2K1 1620 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 TTC21BQ7Z4L5 1316 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 ARHGEF11O15085 1522 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 POLE2P56282 527 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 RAD51AP2Q09MP3 1159 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 MYO1AQ9UBC5 1043 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 SNX14Q9Y5W7 946 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 CALUO43852 315 aaPredicted RBP16.43■□□□□ 0.22
SCN3B-201ENST00000299333 FLOT1O75955 427 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 GNAT2P19087 354 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 RRAGAQ7L523 313 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 COPS6Q7L5N1 327 aa16.43■□□□□ 0.22
SCN3B-201ENST00000299333 PROCA1Q8NCQ7 364 aaPredicted RBP16.43■□□□□ 0.22
SCN3B-201ENST00000299333 ALDH1L1O75891 902 aa16.42■□□□□ 0.22
SCN3B-201ENST00000299333 CTAGE3PQ8IX95 158 aa16.42■□□□□ 0.22
SCN3B-201ENST00000299333 FAM207AQ9NSI2 230 aaPredicted RBP16.42■□□□□ 0.22
SCN3B-201ENST00000299333 RALGAPBQ86X10 1494 aa16.42■□□□□ 0.22
SCN3B-201ENST00000299333 SLC27A2O14975 620 aa16.42■□□□□ 0.22
SCN3B-201ENST00000299333 FBLN1P23142 703 aa16.42■□□□□ 0.22
SCN3B-201ENST00000299333 TFCP2Q12800 502 aa16.42■□□□□ 0.22
SCN3B-201ENST00000299333 MCM9Q9NXL9 1143 aa16.42■□□□□ 0.22
SCN3B-201ENST00000299333 SKOR1P84550 965 aa16.42■□□□□ 0.22
SCN3B-201ENST00000299333 DPH5Q9H2P9 285 aa16.42■□□□□ 0.22
SCN3B-201ENST00000299333 STK10O94804 968 aaKnown RBP16.42■□□□□ 0.22
SCN3B-201ENST00000299333 HSP90AA5PQ58FG0 334 aa16.42■□□□□ 0.22
SCN3B-201ENST00000299333 TCP11Q8WWU5 503 aa16.42■□□□□ 0.22
SCN3B-201ENST00000299333 P3H4Q92791 437 aa16.42■□□□□ 0.22
SCN3B-201ENST00000299333 JRKLQ9Y4A0 524 aa16.42■□□□□ 0.22
SCN3B-201ENST00000299333 SP4Q02446 784 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 CCDC93Q567U6 631 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 C2CD5Q86YS7 1000 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 KCNK3O14649 394 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 DAPK3O43293 454 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 PNOCQ13519 176 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 NXNQ6DKJ4 435 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 PDZD8Q8NEN9 1154 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 N4BP2L2Q92802 583 aaPredicted RBP16.41■□□□□ 0.22
SCN3B-201ENST00000299333 KRIT1O00522 736 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 LRRC8AQ8IWT6 810 aa16.41■□□□□ 0.22
SCN3B-201ENST00000299333 CCDC89Q8N998 374 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms