RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 SGSM2O43147 1006 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 KCNQ3O43525 872 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 CCDC6Q16204 474 aa19.3■□□□□ 0.68
SHANK1-201ENST00000293441 UBLCP1Q8WVY7 318 aaPredicted RBP19.3■□□□□ 0.68
SHANK1-201ENST00000293441 PZPP20742 1482 aa19.29■□□□□ 0.68
SHANK1-201ENST00000293441 LIN9Q5TKA1 542 aa19.29■□□□□ 0.68
SHANK1-201ENST00000293441 DDX23Q9BUQ8 820 aaKnown RBP19.29■□□□□ 0.68
SHANK1-201ENST00000293441 GYG1P46976 350 aa19.29■□□□□ 0.68
SHANK1-201ENST00000293441 NACA2Q9H009 215 aa19.29■□□□□ 0.68
SHANK1-201ENST00000293441 PHKG2P15735 406 aa19.29■□□□□ 0.68
SHANK1-201ENST00000293441 FAM173BQ6P4H8 233 aa19.29■□□□□ 0.68
SHANK1-201ENST00000293441 CABP7Q86V35 215 aa19.29■□□□□ 0.68
SHANK1-201ENST00000293441 NELFCDQ8IXH7 590 aa19.29■□□□□ 0.68
SHANK1-201ENST00000293441 FAM204AQ9H8W3 233 aa19.29■□□□□ 0.68
SHANK1-201ENST00000293441 ARPP21Q9UBL0 812 aaPredicted RBP19.29■□□□□ 0.68
SHANK1-201ENST00000293441 RNASE9P60153 205 aaKnown RBP19.28■□□□□ 0.68
SHANK1-201ENST00000293441 INF2Q27J81 1249 aa19.28■□□□□ 0.68
SHANK1-201ENST00000293441 MAP7D1Q3KQU3 841 aa19.28■□□□□ 0.68
SHANK1-201ENST00000293441 HSPA4P34932 840 aa19.28■□□□□ 0.68
SHANK1-201ENST00000293441 GPIHBP1Q8IV16 184 aa19.28■□□□□ 0.68
SHANK1-201ENST00000293441 SH3BP5O60239 455 aa19.28■□□□□ 0.68
SHANK1-201ENST00000293441 DNAJC21Q5F1R6 531 aaKnown RBP19.28■□□□□ 0.68
SHANK1-201ENST00000293441 TPH2Q8IWU9 490 aa19.28■□□□□ 0.68
SHANK1-201ENST00000293441 JAKMIP2Q96AA8 810 aa19.28■□□□□ 0.68
SHANK1-201ENST00000293441 AS3MTQ9HBK9 375 aa19.28■□□□□ 0.68
SHANK1-201ENST00000293441 E7EWF7 191 aa19.28■□□□□ 0.68
SHANK1-201ENST00000293441 XRCC6P12956 609 aaKnown RBP eCLIP19.28■□□□□ 0.68
SHANK1-201ENST00000293441 GADL1Q6ZQY3 521 aa19.28■□□□□ 0.68
SHANK1-201ENST00000293441 TTLL7Q6ZT98 887 aa19.28■□□□□ 0.68
SHANK1-201ENST00000293441 EDC3Q96F86 508 aaKnown RBP19.28■□□□□ 0.68
SHANK1-201ENST00000293441 HAUS7Q99871 368 aa19.28■□□□□ 0.68
SHANK1-201ENST00000293441 PER1O15534 1290 aaPredicted RBP19.27■□□□□ 0.68
SHANK1-201ENST00000293441 ARHGEF16Q5VV41 709 aa19.27■□□□□ 0.68
SHANK1-201ENST00000293441 PLXNC1O60486 1568 aa19.27■□□□□ 0.68
SHANK1-201ENST00000293441 ZFYVE16Q7Z3T8 1539 aa19.27■□□□□ 0.68
SHANK1-201ENST00000293441 VAV2P52735 878 aa19.27■□□□□ 0.68
SHANK1-201ENST00000293441 TTC14Q96N46 770 aa19.27■□□□□ 0.68
SHANK1-201ENST00000293441 ERCC5P28715 1186 aaPredicted RBP19.27■□□□□ 0.68
SHANK1-201ENST00000293441 KRT222Q8N1A0 295 aa19.27■□□□□ 0.68
SHANK1-201ENST00000293441 TMEM2Q9UHN6 1383 aa19.27■□□□□ 0.68
SHANK1-201ENST00000293441 KIAA0825Q8IV33 1275 aa19.27■□□□□ 0.67
SHANK1-201ENST00000293441 EXOC3O60645 756 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 KRT40Q6A162 431 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 TESPA1A2RU30 521 aaPredicted RBP19.26■□□□□ 0.67
SHANK1-201ENST00000293441 CFAP157Q5JU67 520 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 CMTR1Q8N1G2 835 aaKnown RBP19.26■□□□□ 0.67
SHANK1-201ENST00000293441 ANKS4BQ8N8V4 417 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 SMC6Q96SB8 1091 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.26■□□□□ 0.67
SHANK1-201ENST00000293441 KDM5AP29375 1690 aaKnown RBP19.26■□□□□ 0.67
SHANK1-201ENST00000293441 ZMYM4Q5VZL5 1548 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 USP17L12C9JPN9 530 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 USP17L21D6R901 530 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 PRPF6O94906 941 aaKnown RBP19.26■□□□□ 0.67
SHANK1-201ENST00000293441 BCAMP50895 628 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 NLRX1Q86UT6 975 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 METTL13Q8N6R0 699 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 GLG1Q92896 1179 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 USTQ9Y2C2 406 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 SMCO2A6NFE2 343 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 DPY19L2Q6NUT2 758 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 CCDC26Q8TAB7 109 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 ATP2B4P23634 1241 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 FAM47CQ5HY64 1035 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 BEND3Q5T5X7 828 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 REXO1Q8N1G1 1221 aaKnown RBP19.26■□□□□ 0.67
SHANK1-201ENST00000293441 SDR42E1Q8WUS8 393 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 MRRFQ96E11 262 aaKnown RBP19.26■□□□□ 0.67
SHANK1-201ENST00000293441 NOX5Q96PH1 765 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 CSRNP2Q9H175 543 aa19.26■□□□□ 0.67
SHANK1-201ENST00000293441 TNFAIP1Q13829 316 aa19.25■□□□□ 0.67
SHANK1-201ENST00000293441 ZMYND15Q9H091 742 aa19.25■□□□□ 0.67
SHANK1-201ENST00000293441 TUBB4AP04350 444 aa19.25■□□□□ 0.67
SHANK1-201ENST00000293441 TRIM14Q14142 442 aa19.25■□□□□ 0.67
SHANK1-201ENST00000293441 BLZF1Q9H2G9 400 aa19.25■□□□□ 0.67
SHANK1-201ENST00000293441 ZKSCAN5Q9Y2L8 839 aa19.25■□□□□ 0.67
SHANK1-201ENST00000293441 ZNF202O95125 648 aa19.25■□□□□ 0.67
SHANK1-201ENST00000293441 CHURC1Q8WUH1 139 aa19.25■□□□□ 0.67
SHANK1-201ENST00000293441 CYP26C1Q6V0L0 522 aa19.25■□□□□ 0.67
SHANK1-201ENST00000293441 JAK2O60674 1132 aa19.25■□□□□ 0.67
SHANK1-201ENST00000293441 LTKP29376 864 aa19.25■□□□□ 0.67
SHANK1-201ENST00000293441 ZBTB38Q8NAP3 1195 aaPredicted RBP19.25■□□□□ 0.67
SHANK1-201ENST00000293441 FLAD1Q8NFF5 587 aa19.25■□□□□ 0.67
SHANK1-201ENST00000293441 STAMQ92783 540 aa19.25■□□□□ 0.67
SHANK1-201ENST00000293441 GAS7O60861 476 aa19.24■□□□□ 0.67
SHANK1-201ENST00000293441 RSPH14Q9UHP6 348 aa19.24■□□□□ 0.67
SHANK1-201ENST00000293441 FAM170AA1A519 330 aa19.24■□□□□ 0.67
SHANK1-201ENST00000293441 GIGYF1O75420 1035 aaPredicted RBP19.24■□□□□ 0.67
SHANK1-201ENST00000293441 ALAS1P13196 640 aa19.24■□□□□ 0.67
SHANK1-201ENST00000293441 ATP5JP18859 108 aa19.24■□□□□ 0.67
SHANK1-201ENST00000293441 IRX5P78411 483 aaPredicted RBP19.24■□□□□ 0.67
SHANK1-201ENST00000293441 PPP2R5BQ15173 497 aa19.24■□□□□ 0.67
SHANK1-201ENST00000293441 GEN1Q17RS7 908 aa19.24■□□□□ 0.67
SHANK1-201ENST00000293441 MLXIPQ9HAP2 919 aa19.24■□□□□ 0.67
SHANK1-201ENST00000293441 ZEB2O60315 1214 aa19.24■□□□□ 0.67
SHANK1-201ENST00000293441 GABPAQ06546 454 aa19.24■□□□□ 0.67
SHANK1-201ENST00000293441 LRRC47Q8N1G4 583 aaKnown RBP19.24■□□□□ 0.67
SHANK1-201ENST00000293441 KDRP35968 1356 aa19.24■□□□□ 0.67
SHANK1-201ENST00000293441 DSCC1Q9BVC3 393 aa19.24■□□□□ 0.67
SHANK1-201ENST00000293441 CRCPO75575 148 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms