RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ZNF75DP51815 510 aa12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 FAM76AQ8TAV0 307 aa12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 DBNDD1Q9H9R9 158 aa12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 N4BP3O15049 544 aa12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 SYKP43405 635 aa12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 METAP2P50579 478 aaKnown RBP eCLIP12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 FKBP15Q5T1M5 1219 aa12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 PLEKHM2Q8IWE5 1019 aa12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 SEC31BQ9NQW1 1179 aa12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 AK2P54819 239 aa12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 SSH3Q8TE77 659 aa12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 IVNS1ABPQ9Y6Y0 642 aa12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 POLR1AO95602 1720 aaPredicted RBP12.84□□□□□ -0.35
NPC1L1-201ENST00000289547 PLSCR1O15162 318 aa12.83□□□□□ -0.35
NPC1L1-201ENST00000289547 SSBP05455 408 aaKnown RBP eCLIP12.83□□□□□ -0.35
NPC1L1-201ENST00000289547 INPP5BP32019 993 aa12.83□□□□□ -0.35
NPC1L1-201ENST00000289547 TMEM266Q2M3C6 531 aa12.83□□□□□ -0.36
NPC1L1-201ENST00000289547 ALS2CR12Q96Q35 445 aa12.83□□□□□ -0.36
NPC1L1-201ENST00000289547 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.83□□□□□ -0.36
NPC1L1-201ENST00000289547 TUBBP07437 444 aa12.83□□□□□ -0.36
NPC1L1-201ENST00000289547 IARSP41252 1262 aaKnown RBP12.83□□□□□ -0.36
NPC1L1-201ENST00000289547 TUBB4BP68371 445 aa12.83□□□□□ -0.36
NPC1L1-201ENST00000289547 TDRD12Q587J7 1177 aaKnown RBP12.83□□□□□ -0.36
NPC1L1-201ENST00000289547 ZNF569Q5MCW4 686 aa12.83□□□□□ -0.36
NPC1L1-201ENST00000289547 SYNE4Q8N205 404 aa12.83□□□□□ -0.36
NPC1L1-201ENST00000289547 SEPT11Q9NVA2 429 aaKnown RBP12.83□□□□□ -0.36
NPC1L1-201ENST00000289547 PNMA6EA0A0J9YXQ4 647 aa12.83□□□□□ -0.36
NPC1L1-201ENST00000289547 TCP10Q12799 353 aa12.83□□□□□ -0.36
NPC1L1-201ENST00000289547 ERCC6LQ2NKX8 1250 aa12.83□□□□□ -0.36
NPC1L1-201ENST00000289547 CBX8Q9HC52 389 aa12.83□□□□□ -0.36
NPC1L1-201ENST00000289547 SIGLEC1Q9BZZ2 1709 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 H7C1W4 665 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 AFAP1L1Q8TED9 768 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 BRF1Q92994 677 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 ORC3Q9UBD5 711 aaPredicted RBP12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 RAD17O75943 681 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 BCAMP50895 628 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 CHMP4BP1P59074 171 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 SP8Q8IXZ3 490 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 EHBP1Q8NDI1 1231 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 ANTXR1Q9H6X2 564 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 KBTBD3Q8NAB2 608 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 RSRC1Q96IZ7 334 aaKnown RBP12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 CRAMP1Q96RY5 1269 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 RABEP2Q9H5N1 569 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 ARMT1Q9H993 441 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 ZAP70P43403 619 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 CCDC82Q8N4S0 544 aa12.82□□□□□ -0.36
NPC1L1-201ENST00000289547 ATP5JP18859 108 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 LRMPQ12912 555 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 MICU3Q86XE3 530 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 ARPP21Q9UBL0 812 aaPredicted RBP12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 ZBTB43O43298 467 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 SCNN1DP51172 638 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 LRRC24Q50LG9 513 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 TTLL11Q8NHH1 800 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 RBM8AQ9Y5S9 174 aaKnown RBP12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 PHLPP1O60346 1717 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 TCP10L2B9ZVM9 353 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 GCOM1H8Y6P7 765 aaPredicted RBP12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 NDUFAB1O14561 156 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 MYZAPP0CAP1 466 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 CLNS1AP54105 237 aaKnown RBP12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 PODNQ7Z5L7 613 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 TGFBRAP1Q8WUH2 860 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 ITPK1Q13572 414 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 STYK1Q6J9G0 422 aa12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 CPSF2Q9P2I0 782 aaKnown RBP12.81□□□□□ -0.36
NPC1L1-201ENST00000289547 MAPKAPK5Q8IW41 473 aa12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 RRP36Q96EU6 259 aaKnown RBP12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 CAPZA3Q96KX2 299 aa12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 MYO5BQ9ULV0 1848 aa12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 USP42Q9H9J4 1324 aaKnown RBP12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 SSR1P43307 286 aaKnown RBP12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 SMARCC2Q8TAQ2 1214 aa12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 SMCR8Q8TEV9 937 aaPredicted RBP12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 SLC5A4Q9NY91 659 aa12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 TRIM28Q13263 835 aaKnown RBP12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 RTN1Q16799 776 aa12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 ISCA1Q9BUE6 129 aa12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 LRRC2Q9BYS8 371 aa12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 ABT1Q9ULW3 272 aaKnown RBP12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 BTDP43251 543 aa12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 POTEDQ86YR6 584 aa12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 KCNG4Q8TDN1 519 aa12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 VTI1AQ96AJ9 217 aa12.8□□□□□ -0.36
NPC1L1-201ENST00000289547 ZNF532Q9HCE3 1301 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 TGFB2P61812 414 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 FAM173BQ6P4H8 233 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 GPT2Q8TD30 523 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 MKRN1Q9UHC7 482 aaKnown RBP12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 PYCARDQ9ULZ3 195 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 IBTKQ9P2D0 1353 aaPredicted RBP12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 ZBED4O75132 1171 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 ZNF142P52746 1687 aaPredicted RBP12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 A0A0G2JLW4 131 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 AKR1B10O60218 316 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 CAMTA2O94983 1202 aa12.79□□□□□ -0.36
NPC1L1-201ENST00000289547 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms