RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 KCNG4Q8TDN1 519 aa21.98■■□□□ 1.11
VBP1-201ENST00000286428 C7orf43Q8WVR3 580 aa21.98■■□□□ 1.11
VBP1-201ENST00000286428 DDX19AQ9NUU7 478 aaKnown RBP21.98■■□□□ 1.11
VBP1-201ENST00000286428 TAOK2Q9UL54 1235 aa21.98■■□□□ 1.11
VBP1-201ENST00000286428 LAMB1P07942 1786 aa21.97■■□□□ 1.11
VBP1-201ENST00000286428 YEATS4O95619 227 aa21.97■■□□□ 1.11
VBP1-201ENST00000286428 XRCC6P12956 609 aaKnown RBP eCLIP21.97■■□□□ 1.11
VBP1-201ENST00000286428 GNAQP50148 359 aa21.97■■□□□ 1.11
VBP1-201ENST00000286428 KIF23Q02241 960 aaPredicted RBP21.97■■□□□ 1.11
VBP1-201ENST00000286428 TROAPQ12815 778 aa21.97■■□□□ 1.11
VBP1-201ENST00000286428 OLFM4Q6UX06 510 aa21.97■■□□□ 1.11
VBP1-201ENST00000286428 C16orf86Q6ZW13 317 aa21.97■■□□□ 1.11
VBP1-201ENST00000286428 DEFB132Q7Z7B7 95 aa21.97■■□□□ 1.11
VBP1-201ENST00000286428 GAS2L3Q86XJ1 694 aa21.97■■□□□ 1.11
VBP1-201ENST00000286428 TTLL6Q8N841 843 aa21.97■■□□□ 1.11
VBP1-201ENST00000286428 POLR3EQ9NVU0 708 aa21.97■■□□□ 1.11
VBP1-201ENST00000286428 USP17L3A6NCW0 530 aa21.96■■□□□ 1.11
VBP1-201ENST00000286428 USP17L4A6NCW7 530 aa21.96■■□□□ 1.11
VBP1-201ENST00000286428 KIAA2012Q0VF49 1180 aa21.96■■□□□ 1.11
VBP1-201ENST00000286428 FAM47AQ5JRC9 791 aa21.96■■□□□ 1.11
VBP1-201ENST00000286428 MYSM1Q5VVJ2 828 aa21.96■■□□□ 1.11
VBP1-201ENST00000286428 USP17L1Q7RTZ2 530 aa21.96■■□□□ 1.11
VBP1-201ENST00000286428 BICD2Q8TD16 824 aa21.96■■□□□ 1.11
VBP1-201ENST00000286428 VPS33BQ9H267 617 aa21.96■■□□□ 1.11
VBP1-201ENST00000286428 BAZ2AQ9UIF9 1905 aaKnown RBP21.96■■□□□ 1.11
VBP1-201ENST00000286428 MYH2Q9UKX2 1941 aa21.96■■□□□ 1.11
VBP1-201ENST00000286428 PRPF3O43395 683 aaKnown RBP21.95■■□□□ 1.1
VBP1-201ENST00000286428 SOGA3Q5TF21 947 aa21.95■■□□□ 1.1
VBP1-201ENST00000286428 NBPF11Q86T75 865 aa21.95■■□□□ 1.1
VBP1-201ENST00000286428 USP28Q96RU2 1077 aa21.95■■□□□ 1.1
VBP1-201ENST00000286428 TCHHQ07283 1943 aa21.95■■□□□ 1.1
VBP1-201ENST00000286428 SMIM22K7EJ46 135 aa21.95■■□□□ 1.1
VBP1-201ENST00000286428 ECE2O60344 883 aa21.95■■□□□ 1.1
VBP1-201ENST00000286428 SF3A1Q15459 793 aaKnown RBP21.95■■□□□ 1.1
VBP1-201ENST00000286428 CCDC93Q567U6 631 aa21.95■■□□□ 1.1
VBP1-201ENST00000286428 CERS5Q8N5B7 392 aa21.95■■□□□ 1.1
VBP1-201ENST00000286428 TSPY26PQ9H489 355 aa21.95■■□□□ 1.1
VBP1-201ENST00000286428 DBNDD1Q9H9R9 158 aa21.95■■□□□ 1.1
VBP1-201ENST00000286428 C10orf71Q711Q0 1435 aa21.94■■□□□ 1.1
VBP1-201ENST00000286428 F8W031 263 aaPredicted RBP21.94■■□□□ 1.1
VBP1-201ENST00000286428 U2AF2P26368 475 aaKnown RBP eCLIP21.94■■□□□ 1.1
VBP1-201ENST00000286428 PLCD1P51178 756 aa21.94■■□□□ 1.1
VBP1-201ENST00000286428 OTUD7BQ6GQQ9 843 aa21.94■■□□□ 1.1
VBP1-201ENST00000286428 USP40Q9NVE5 1235 aa21.94■■□□□ 1.1
VBP1-201ENST00000286428 SWAP70Q9UH65 585 aa21.94■■□□□ 1.1
VBP1-201ENST00000286428 SAP30BPQ9UHR5 308 aaKnown RBP21.94■■□□□ 1.1
VBP1-201ENST00000286428 CDK8P49336 464 aa21.93■■□□□ 1.1
VBP1-201ENST00000286428 STK38Q15208 465 aa21.93■■□□□ 1.1
VBP1-201ENST00000286428 PPP4R3BQ5MIZ7 849 aa21.93■■□□□ 1.1
VBP1-201ENST00000286428 JMYQ8N9B5 988 aa21.93■■□□□ 1.1
VBP1-201ENST00000286428 DYNLL2Q96FJ2 89 aa21.93■■□□□ 1.1
VBP1-201ENST00000286428 ZDHHC15Q96MV8 337 aa21.93■■□□□ 1.1
VBP1-201ENST00000286428 FOXP1Q9H334 677 aaPredicted RBP21.93■■□□□ 1.1
VBP1-201ENST00000286428 MMP1P03956 469 aa21.92■■□□□ 1.1
VBP1-201ENST00000286428 HLA-DOAP06340 250 aa21.92■■□□□ 1.1
VBP1-201ENST00000286428 NASPP49321 788 aaPredicted RBP21.92■■□□□ 1.1
VBP1-201ENST00000286428 CEBPZQ03701 1054 aaKnown RBP21.92■■□□□ 1.1
VBP1-201ENST00000286428 TMTC3Q6ZXV5 915 aa21.92■■□□□ 1.1
VBP1-201ENST00000286428 ILDR1Q86SU0 546 aaPredicted RBP21.92■■□□□ 1.1
VBP1-201ENST00000286428 BRMS1Q9HCU9 246 aa21.92■■□□□ 1.1
VBP1-201ENST00000286428 CRKP46108 304 aa21.91■■□□□ 1.1
VBP1-201ENST00000286428 ADALQ6DHV7 355 aa21.91■■□□□ 1.1
VBP1-201ENST00000286428 NEDD1Q8NHV4 660 aa21.91■■□□□ 1.1
VBP1-201ENST00000286428 PSMD1Q99460 953 aa21.91■■□□□ 1.1
VBP1-201ENST00000286428 LZTS2Q9BRK4 669 aa21.91■■□□□ 1.1
VBP1-201ENST00000286428 NUP62CLQ9H1M0 184 aa21.91■■□□□ 1.1
VBP1-201ENST00000286428 SERPINA10Q9UK55 444 aa21.91■■□□□ 1.1
VBP1-201ENST00000286428 RASA1P20936 1047 aa21.91■■□□□ 1.1
VBP1-201ENST00000286428 ME1P48163 572 aa21.91■■□□□ 1.1
VBP1-201ENST00000286428 TGFB2P61812 414 aa21.91■■□□□ 1.1
VBP1-201ENST00000286428 DACT2Q5SW24 774 aa21.91■■□□□ 1.1
VBP1-201ENST00000286428 CCDC73Q6ZRK6 1079 aa21.91■■□□□ 1.1
VBP1-201ENST00000286428 LINC00301Q8NCQ3 95 aa21.91■■□□□ 1.1
VBP1-201ENST00000286428 DHX36Q9H2U1 1008 aaKnown RBP21.91■■□□□ 1.1
VBP1-201ENST00000286428 ZNF219Q9P2Y4 722 aaPredicted RBP21.91■■□□□ 1.1
VBP1-201ENST00000286428 MYO3BQ8WXR4 1341 aa21.9■■□□□ 1.1
VBP1-201ENST00000286428 A0A1W2PQ27 194 aa21.9■■□□□ 1.1
VBP1-201ENST00000286428 A0A1W2PQ64 194 aa21.9■■□□□ 1.1
VBP1-201ENST00000286428 A0A1W2PQD8 194 aa21.9■■□□□ 1.1
VBP1-201ENST00000286428 CTAGE5O15320 804 aa21.9■■□□□ 1.1
VBP1-201ENST00000286428 PPIP5K2O43314 1243 aa21.9■■□□□ 1.1
VBP1-201ENST00000286428 POLD1P28340 1107 aa21.9■■□□□ 1.1
VBP1-201ENST00000286428 ANO1Q5XXA6 986 aa21.9■■□□□ 1.1
VBP1-201ENST00000286428 CCDC82Q8N4S0 544 aa21.9■■□□□ 1.1
VBP1-201ENST00000286428 PNMA1Q8ND90 353 aa21.9■■□□□ 1.1
VBP1-201ENST00000286428 PGBD1Q96JS3 809 aa21.9■■□□□ 1.1
VBP1-201ENST00000286428 AIFM3Q96NN9 605 aa21.9■■□□□ 1.1
VBP1-201ENST00000286428 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.9■■□□□ 1.1
VBP1-201ENST00000286428 NAV1Q8NEY1 1877 aa21.9■■□□□ 1.1
VBP1-201ENST00000286428 SPTLC2O15270 562 aa21.89■■□□□ 1.1
VBP1-201ENST00000286428 C21orf2O43822 256 aa21.89■■□□□ 1.1
VBP1-201ENST00000286428 NPM3O75607 178 aaKnown RBP21.89■■□□□ 1.1
VBP1-201ENST00000286428 AOC3Q16853 763 aa21.89■■□□□ 1.1
VBP1-201ENST00000286428 SLC4A8Q2Y0W8 1093 aa21.89■■□□□ 1.1
VBP1-201ENST00000286428 TPRNQ4KMQ1 711 aa21.89■■□□□ 1.1
VBP1-201ENST00000286428 RILPL1Q5EBL4 403 aa21.89■■□□□ 1.1
VBP1-201ENST00000286428 RCSD1Q6JBY9 416 aa21.89■■□□□ 1.1
VBP1-201ENST00000286428 NOSTRINQ8IVI9 506 aa21.89■■□□□ 1.1
VBP1-201ENST00000286428 IL17RBQ9NRM6 502 aa21.89■■□□□ 1.1
VBP1-201ENST00000286428 NMT2O60551 498 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms