RNA–Protein interactions for RNA: ENST00000280704.8

LDHC-201, Transcript of lactate dehydrogenase C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHC, Length 1,256 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-201ENST00000280704 NLGN1Q8N2Q7 840 aa7.78□□□□□ -1.16
LDHC-201ENST00000280704 CCDC97Q96F63 343 aaPredicted RBP7.78□□□□□ -1.16
LDHC-201ENST00000280704 MEGF10Q96KG7 1140 aa7.78□□□□□ -1.16
LDHC-201ENST00000280704 SPATA32Q96LK8 384 aa7.78□□□□□ -1.16
LDHC-201ENST00000280704 UBE2OQ9C0C9 1292 aaKnown RBP7.78□□□□□ -1.16
LDHC-201ENST00000280704 PCMTD2Q9NV79 361 aa7.78□□□□□ -1.16
LDHC-201ENST00000280704 CHMP3Q9Y3E7 222 aa7.78□□□□□ -1.16
LDHC-201ENST00000280704 RBM19Q9Y4C8 960 aaKnown RBP7.78□□□□□ -1.16
LDHC-201ENST00000280704 RIPOR2Q9Y4F9 1068 aa7.78□□□□□ -1.16
LDHC-201ENST00000280704 COL6A3P12111 3177 aa7.77□□□□□ -1.17
LDHC-201ENST00000280704 SFI1A8K8P3 1242 aa7.77□□□□□ -1.17
LDHC-201ENST00000280704 SMARCA5O60264 1052 aaPredicted RBP7.77□□□□□ -1.17
LDHC-201ENST00000280704 COBLO75128 1261 aa7.77□□□□□ -1.17
LDHC-201ENST00000280704 DKK1O94907 266 aa7.77□□□□□ -1.17
LDHC-201ENST00000280704 RASA1P20936 1047 aa7.77□□□□□ -1.17
LDHC-201ENST00000280704 MCCP23508 829 aa7.77□□□□□ -1.17
LDHC-201ENST00000280704 HIRAP54198 1017 aaPredicted RBP7.77□□□□□ -1.17
LDHC-201ENST00000280704 TMF1P82094 1093 aa7.77□□□□□ -1.17
LDHC-201ENST00000280704 MAP1SQ66K74 1059 aaPredicted RBP7.77□□□□□ -1.17
LDHC-201ENST00000280704 CIAPIN1Q6FI81 312 aa7.77□□□□□ -1.17
LDHC-201ENST00000280704 PSAPL1Q6NUJ1 521 aa7.77□□□□□ -1.17
LDHC-201ENST00000280704 DDX21Q9NR30 783 aaKnown RBP eCLIP7.77□□□□□ -1.17
LDHC-201ENST00000280704 TXKP42681 527 aa7.76□□□□□ -1.17
LDHC-201ENST00000280704 C1orf53Q5VUE5 145 aa7.76□□□□□ -1.17
LDHC-201ENST00000280704 PRR23CQ6ZRP0 262 aa7.76□□□□□ -1.17
LDHC-201ENST00000280704 CTU1Q7Z7A3 348 aaKnown RBP7.76□□□□□ -1.17
LDHC-201ENST00000280704 DNAJC2Q99543 621 aaKnown RBP7.76□□□□□ -1.17
LDHC-201ENST00000280704 IGFLR1Q9H665 355 aa7.76□□□□□ -1.17
LDHC-201ENST00000280704 TRAK1Q9UPV9 953 aa7.76□□□□□ -1.17
LDHC-201ENST00000280704 HCN4Q9Y3Q4 1203 aa7.76□□□□□ -1.17
LDHC-201ENST00000280704 PALLDQ8WX93 1383 aa7.75□□□□□ -1.17
LDHC-201ENST00000280704 ADAMTSL1Q8N6G6 1762 aa7.75□□□□□ -1.17
LDHC-201ENST00000280704 NFKBIEO00221 500 aa7.75□□□□□ -1.17
LDHC-201ENST00000280704 PLA2G5P39877 138 aa7.75□□□□□ -1.17
LDHC-201ENST00000280704 CNPY4Q8N129 248 aa7.75□□□□□ -1.17
LDHC-201ENST00000280704 PHACTR1Q9C0D0 580 aa7.75□□□□□ -1.17
LDHC-201ENST00000280704 IGSF5Q9NSI5 407 aa7.75□□□□□ -1.17
LDHC-201ENST00000280704 DNAJB12Q9NXW2 375 aaKnown RBP7.75□□□□□ -1.17
LDHC-201ENST00000280704 TRPM7Q96QT4 1865 aa7.75□□□□□ -1.17
LDHC-201ENST00000280704 ROCK1Q13464 1354 aa7.74□□□□□ -1.17
LDHC-201ENST00000280704 TRIOBPQ9H2D6 2365 aa7.74□□□□□ -1.17
LDHC-201ENST00000280704 C21orf2O43822 256 aa7.74□□□□□ -1.17
LDHC-201ENST00000280704 PPP1R12BO60237 982 aaPredicted RBP7.74□□□□□ -1.17
LDHC-201ENST00000280704 SSTR4P31391 388 aa7.74□□□□□ -1.17
LDHC-201ENST00000280704 GRIK5Q16478 980 aa7.74□□□□□ -1.17
LDHC-201ENST00000280704 FBXO11Q86XK2 927 aa7.74□□□□□ -1.17
LDHC-201ENST00000280704 GPATCH11Q8N954 259 aa7.74□□□□□ -1.17
LDHC-201ENST00000280704 KCNH5Q8NCM2 988 aa7.74□□□□□ -1.17
LDHC-201ENST00000280704 FAM122AQ96E09 287 aa7.74□□□□□ -1.17
LDHC-201ENST00000280704 SUSD3Q96L08 255 aa7.74□□□□□ -1.17
LDHC-201ENST00000280704 SNX27Q96L92 541 aa7.74□□□□□ -1.17
LDHC-201ENST00000280704 CD97P48960 835 aa7.73□□□□□ -1.17
LDHC-201ENST00000280704 SEC13P55735 322 aa7.73□□□□□ -1.17
LDHC-201ENST00000280704 FMR1Q06787 632 aaKnown RBP eCLIP7.73□□□□□ -1.17
LDHC-201ENST00000280704 CST9Q5W186 159 aa7.73□□□□□ -1.17
LDHC-201ENST00000280704 CDK19Q9BWU1 502 aa7.73□□□□□ -1.17
LDHC-201ENST00000280704 ANKIB1Q9P2G1 1089 aa7.73□□□□□ -1.17
LDHC-201ENST00000280704 RGS9O75916 674 aaPredicted RBP7.72□□□□□ -1.17
LDHC-201ENST00000280704 MED26O95402 600 aa7.72□□□□□ -1.17
LDHC-201ENST00000280704 LMOD1P29536 600 aaPredicted RBP7.72□□□□□ -1.17
LDHC-201ENST00000280704 EPHX2P34913 555 aa7.72□□□□□ -1.17
LDHC-201ENST00000280704 PLAURQ03405 335 aa7.72□□□□□ -1.17
LDHC-201ENST00000280704 PKN2Q16513 984 aaKnown RBP7.72□□□□□ -1.17
LDHC-201ENST00000280704 PNMA8AQ86V59 439 aaPredicted RBP7.72□□□□□ -1.17
LDHC-201ENST00000280704 LINC00116Q8NCU8 138 aa7.72□□□□□ -1.17
LDHC-201ENST00000280704 MYH16Q9H6N6 1097 aa7.72□□□□□ -1.17
LDHC-201ENST00000280704 HACL1Q9UJ83 578 aa7.72□□□□□ -1.17
LDHC-201ENST00000280704 GYS1P13807 737 aa7.71□□□□□ -1.18
LDHC-201ENST00000280704 FSTP19883 344 aa7.71□□□□□ -1.18
LDHC-201ENST00000280704 SRPK2P78362 688 aaKnown RBP7.71□□□□□ -1.18
LDHC-201ENST00000280704 CRTC2Q53ET0 693 aaPredicted RBP7.71□□□□□ -1.18
LDHC-201ENST00000280704 AKAP4Q5JQC9 854 aa7.71□□□□□ -1.18
LDHC-201ENST00000280704 ALDH16A1Q8IZ83 802 aa7.71□□□□□ -1.18
LDHC-201ENST00000280704 STAG2Q8N3U4 1231 aa7.71□□□□□ -1.18
LDHC-201ENST00000280704 DTWD1Q8N5C7 304 aa7.71□□□□□ -1.18
LDHC-201ENST00000280704 SCG3Q8WXD2 468 aaKnown RBP7.71□□□□□ -1.18
LDHC-201ENST00000280704 C2orf49Q9BVC5 232 aaPredicted RBP7.71□□□□□ -1.18
LDHC-201ENST00000280704 GSX2Q9BZM3 304 aa7.71□□□□□ -1.18
LDHC-201ENST00000280704 SAGE1Q9NXZ1 904 aa7.71□□□□□ -1.18
LDHC-201ENST00000280704 RAPGEFL1Q9UHV5 662 aa7.71□□□□□ -1.18
LDHC-201ENST00000280704 NEFMP07197 916 aa7.7□□□□□ -1.18
LDHC-201ENST00000280704 TAL1P17542 331 aaPredicted RBP7.7□□□□□ -1.18
LDHC-201ENST00000280704 RBM10P98175 930 aaKnown RBP7.7□□□□□ -1.18
LDHC-201ENST00000280704 PTK7Q13308 1070 aa7.7□□□□□ -1.18
LDHC-201ENST00000280704 SAPCD2Q86UD0 394 aa7.7□□□□□ -1.18
LDHC-201ENST00000280704 DZIP1LQ8IYY4 767 aaKnown RBP7.7□□□□□ -1.18
LDHC-201ENST00000280704 GAS2L2Q8NHY3 880 aa7.7□□□□□ -1.18
LDHC-201ENST00000280704 SMARCC1Q92922 1105 aaPredicted RBP7.7□□□□□ -1.18
LDHC-201ENST00000280704 LPIN3Q9BQK8 851 aa7.7□□□□□ -1.18
LDHC-201ENST00000280704 VRTNQ9H8Y1 702 aa7.7□□□□□ -1.18
LDHC-201ENST00000280704 OAS3Q9Y6K5 1087 aaKnown RBP7.7□□□□□ -1.18
LDHC-201ENST00000280704 UNCXA6NJT0 531 aa7.69□□□□□ -1.18
LDHC-201ENST00000280704 FAM196BA6NMK8 535 aa7.69□□□□□ -1.18
LDHC-201ENST00000280704 USP17L15C9J2P7 530 aa7.69□□□□□ -1.18
LDHC-201ENST00000280704 USP17L10C9JJH3 530 aa7.69□□□□□ -1.18
LDHC-201ENST00000280704 USP17L13C9JLJ4 530 aa7.69□□□□□ -1.18
LDHC-201ENST00000280704 USP17L12C9JPN9 530 aa7.69□□□□□ -1.18
LDHC-201ENST00000280704 USP17L11C9JVI0 530 aa7.69□□□□□ -1.18
LDHC-201ENST00000280704 USP17L21D6R901 530 aa7.69□□□□□ -1.18
LDHC-201ENST00000280704 USP17L18D6R9N7 530 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms