RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 EVX2Q03828 476 aa13.54□□□□□ -0.24
SLC13A3-201ENST00000279027 IKQ13123 557 aaPredicted RBP13.54□□□□□ -0.24
SLC13A3-201ENST00000279027 LMO7Q8WWI1 1683 aa13.54□□□□□ -0.24
SLC13A3-201ENST00000279027 NEMFO60524 1076 aa13.54□□□□□ -0.24
SLC13A3-201ENST00000279027 TRAPPC3LQ5T215 181 aa13.54□□□□□ -0.24
SLC13A3-201ENST00000279027 ZSCAN29Q8IWY8 852 aaPredicted RBP13.54□□□□□ -0.24
SLC13A3-201ENST00000279027 LINC00116Q8NCU8 138 aa13.54□□□□□ -0.24
SLC13A3-201ENST00000279027 FAM84BQ96KN1 310 aaPredicted RBP13.54□□□□□ -0.24
SLC13A3-201ENST00000279027 UFL1O94874 794 aa13.54□□□□□ -0.24
SLC13A3-201ENST00000279027 NTSR2O95665 410 aa13.54□□□□□ -0.24
SLC13A3-201ENST00000279027 MMP1P03956 469 aa13.54□□□□□ -0.24
SLC13A3-201ENST00000279027 ERCC3P19447 782 aa13.54□□□□□ -0.24
SLC13A3-201ENST00000279027 SOGA3Q5TF21 947 aa13.54□□□□□ -0.24
SLC13A3-201ENST00000279027 AGXT2Q9BYV1 514 aa13.54□□□□□ -0.24
SLC13A3-201ENST00000279027 CNBD1Q8NA66 436 aa13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 SLC44A5Q8NCS7 719 aa13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 DCCP43146 1447 aa13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 RTL9Q8NET4 1388 aa13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 LIFRP42702 1097 aa13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 GNG11P61952 73 aa13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 VGLL2Q8N8G2 317 aa13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 MRFAP1L1Q96HT8 127 aa13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 NYXQ9GZU5 481 aa13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 TMEM232C9JQI7 657 aa13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 PRR29P0C7W0 189 aa13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 UBE4AQ14139 1066 aa13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 TSR1Q2NL82 804 aaKnown RBP13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 TTC38Q5R3I4 469 aa13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 MTERF4Q7Z6M4 381 aaKnown RBP13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 ENAHQ8N8S7 591 aaPredicted RBP13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 USP21Q9UK80 565 aa13.53□□□□□ -0.24
SLC13A3-201ENST00000279027 BAG3O95817 575 aa13.52□□□□□ -0.24
SLC13A3-201ENST00000279027 FAM196AQ6ZSG2 479 aa13.52□□□□□ -0.24
SLC13A3-201ENST00000279027 CCDC150Q8NCX0 1101 aa13.52□□□□□ -0.24
SLC13A3-201ENST00000279027 DPF2Q92785 391 aa13.52□□□□□ -0.24
SLC13A3-201ENST00000279027 ZHX3Q9H4I2 956 aa13.52□□□□□ -0.24
SLC13A3-201ENST00000279027 ZNF804BA4D1E1 1349 aa13.52□□□□□ -0.24
SLC13A3-201ENST00000279027 KIF5BP33176 963 aa13.52□□□□□ -0.25
SLC13A3-201ENST00000279027 UBA7P41226 1012 aa13.52□□□□□ -0.25
SLC13A3-201ENST00000279027 USP17L3A6NCW0 530 aa13.52□□□□□ -0.25
SLC13A3-201ENST00000279027 USP17L4A6NCW7 530 aa13.52□□□□□ -0.25
SLC13A3-201ENST00000279027 AXDND1Q5T1B0 1012 aaPredicted RBP13.52□□□□□ -0.25
SLC13A3-201ENST00000279027 USP17L1Q7RTZ2 530 aa13.52□□□□□ -0.25
SLC13A3-201ENST00000279027 DESI2Q9BSY9 194 aa13.52□□□□□ -0.25
SLC13A3-201ENST00000279027 N4BP3O15049 544 aa13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 FGFR2P21802 821 aa13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 PTGDRQ13258 359 aa13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 ZNF771Q7L3S4 317 aaPredicted RBP13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 LZTFL1Q9NQ48 299 aa13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 TCRBV5S4A2TA0A5A2 114 aa13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 TXNRD3Q86VQ6 643 aa13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 TRIM34Q9BYJ4 488 aa13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 VPS16Q9H269 839 aa13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 SAMSN1Q9NSI8 373 aaKnown RBP13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 ZNF215Q9UL58 517 aaPredicted RBP13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 SPATA31A1Q5TZJ5 1347 aa13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 NOM1Q5C9Z4 860 aaKnown RBP13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 TEX35Q5T0J7 233 aa13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 SYMPKQ92797 1274 aaKnown RBP13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 BCL9O00512 1426 aa13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 RIC1Q4ADV7 1423 aa13.51□□□□□ -0.25
SLC13A3-201ENST00000279027 SPTY2D1Q68D10 685 aaPredicted RBP13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 STAG1Q8WVM7 1258 aa13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 ANKRD2Q9GZV1 360 aa13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 CTNND2Q9UQB3 1225 aa13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 STAT6P42226 847 aa13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 NAPAP54920 295 aa13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 LETM2Q2VYF4 491 aa13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 SLC51AQ86UW1 340 aa13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 TEX11Q8IYF3 940 aa13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 CDK5RAP3Q96JB5 506 aa13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 NUP88Q99567 741 aaPredicted RBP13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 BSDC1Q9NW68 430 aaPredicted RBP13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 PAXBP1Q9Y5B6 917 aa13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 SALL1Q9NSC2 1324 aa13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 AFDNP55196 1824 aaKnown RBP13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 ELF2Q15723 593 aa13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 UBXN4Q92575 508 aa13.5□□□□□ -0.25
SLC13A3-201ENST00000279027 RBM6P78332 1123 aaKnown RBP13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 CCDC96Q2M329 555 aa13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 ABCC12Q96J65 1359 aa13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 PPP6R2O75170 966 aa13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 CTR9Q6PD62 1173 aa13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 SGMS1Q86VZ5 419 aa13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 METTL16Q86W50 562 aaKnown RBP13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 FAM217BQ9NTX9 383 aaPredicted RBP13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 SEC63Q9UGP8 760 aaKnown RBP13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 MAN1B1Q9UKM7 699 aa13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 IDEP14735 1019 aa13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 TERF1P54274 439 aa13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 JAKMIP3Q5VZ66 844 aa13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 PNMA1Q8ND90 353 aa13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 UBA5Q9GZZ9 404 aa13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 C5P01031 1676 aa13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 KIF1AQ12756 1690 aa13.49□□□□□ -0.25
SLC13A3-201ENST00000279027 CCDC178Q5BJE1 867 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 ARHGEF1Q92888 912 aaKnown RBP13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 NTRK3Q16288 839 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 INF2Q27J81 1249 aa13.48□□□□□ -0.25
SLC13A3-201ENST00000279027 ZNF622Q969S3 477 aaKnown RBP eCLIP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms